TcoF overview
| TcoF: | Hdac2 | |
| GeneID: | 15182 | |
| Name: | Histone deacetylase | |
| Ensembl: | ENSMUSG00000019777 | |
| Species: | Mouse | |
| Class: | class HC | |
| Family: | Histone deacetylase | |
| Disease: | -- | |
| Go-trem: | 80 | |
| Pathway: | 19 | |
| Super Enhancer: | chr10:37046981-37058429 chr10:36917764-36918498 chr10:36848766-36849312 chr10:37047069-37049176 chr10:37014459-37048989 chr10:36923660-36936946 chr10:36850262-36850793 chr10:36923582-36936941 chr10:37047300-37048508 chr10:37015330-37016012 chr10:37021135-37023169 chr10:36935655-36936377 chr10:36923682-36936683 chr10:37015306-37016100 chr10:37000734-37001269 |
|
| Enhancer: |
chr10:36751180-36757280 chr10:36849450-36853040 chr10:36878580-36882280 chr10:36888980-36892430 chr10:36950320-36957580 chr10:36959750-36962900 chr10:36966120-36971980 chr10:37012880-37014580 chr10:37032780-37036250 chr10:37061680-37065920 chr10:37082960-37085020 chr10:37116400-37121900 chr10:36796580-36800200 chr10:36951740-36952230 chr10:36766800-36768900 chr10:36852060-36853040 chr10:36795710-36799920 chr10:36637650-36638120 chr10:36798340-36798550 chr10:36951740-36952260 chr10:36816330-36816830 chr10:36911260-36915360 chr10:36950930-36953150 chr10:36951670-36952480 chr10:37034170-37036130 chr10:36796380-36799200 chr10:36850230-36853040 chr10:37039060-37043890 chr10:37061680-37064320 chr10:36797940-36798860 chr10:36951620-36952380 chr10:37041000-37041410 chr10:36946800-36949210 chr10:36949390-36959770 chr10:37037880-37044660 chr10:37052970-37065230 chr10:36908750-36913440 chr10:36950800-36952890 chr10:36637520-36638440 chr10:36950220-36953490 chr10:36766230-36769280 chr10:36951460-36952960 chr10:36794640-36800970 chr10:36832480-36833460 chr10:37116960-37117840 chr10:36766910-36768630 chr10:36913570-36915630 chr10:36969410-36971970 chr10:36797530-36799620 chr10:36961050-36962340 chr10:36951660-36955710 chr10:36814060-36816750 chr10:36796600-36800120 chr10:36814720-36816810 chr10:36797740-36799650 chr10:36751260-36756820 chr10:36765490-36771260 chr10:36850500-36853040 chr10:36965910-36972100 chr10:36909190-36910670 chr10:36950130-36952990 chr10:37000190-37000970 chr10:36909110-36915840 chr10:36976360-36982090 chr10:36331220-36331670 chr10:36889540-36891350 chr10:36969160-36972260 chr10:37034500-37035880 chr10:37099590-37100760 chr10:37116610-37117860 chr10:36797300-36799300 chr10:36890200-36890800 chr10:36913970-36914420 chr10:36983380-36983770 chr10:36995020-36996570 chr10:36983400-36983760 chr10:36913670-36915860 chr10:36946780-36949230 chr10:36953590-36957440 chr10:37038590-37041450 chr10:37052530-37059840 chr10:36797500-36799470 chr10:36798080-36798590 chr10:36890240-36890900 chr10:36637640-36638120 chr10:36913940-36915470 chr10:36951640-36952820 chr10:36911710-36913310 chr10:36850010-36853040 chr10:36798180-36798900 |
|
| Promoter: |
chr10:36972543-36976543 |
ChIP-seq based regulatory details of Hdac2
| Sample ID | Experiment target | Biosample term name | Cell type | Tissue type | Source |
|---|---|---|---|---|---|
| TcoF_01_30220 | Hdac2 | NIH/3T3 | Fibroblast | Embryo | ChIP_Atlas |
| TcoF_01_30219 | Hdac2 | Scid.adh.2c2 | None | Blood | ChIP_Atlas |
| TcoF_01_30218 | Hdac2 | Scid.adh.2c2 | None | Blood | ChIP_Atlas |
| TcoF_01_30213 | Hdac2 | Bone Marrow Cells | None | Blood | ChIP_Atlas |
| TcoF_01_30212 | Hdac2 | Bone Marrow Cells | None | Blood | ChIP_Atlas |
| TcoF_01_30211 | Hdac2 | CD4 CD8 double negative cells | None | Blood | ChIP_Atlas |
| TcoF_01_30210 | Hdac2 | CD4 CD8 double negative cells | None | Blood | ChIP_Atlas |
| TcoF_01_30139 | Hdac2 | mESC derived haemogenic endothelium | Pluripotent stem cell | None | ChIP_Atlas |
| TcoF_01_30138 | Hdac2 | mESC derived haemogenic endothelium | Pluripotent stem cell | None | ChIP_Atlas |
| TcoF_01_30137 | Hdac2 | mESC derived haemogenic endothelium | Pluripotent stem cell | None | ChIP_Atlas |
| TcoF_01_20773 | Hdac2 | None | resting | Spleen | Cistrome |
| TcoF_01_20720 | Hdac2 | None | Macrophage | Bone Marrow | Cistrome |
| TcoF_01_20700 | Hdac2 | SCLC-24H | B Lymphocyte | Spleen | Cistrome |
| TcoF_01_20657 | Hdac2 | None | Macrophage | Bone Marrow | Cistrome |
| TcoF_01_20656 | Hdac2 | None | Macrophage | Bone Marrow | Cistrome |
| TcoF_01_20655 | Hdac2 | None | Macrophage | Bone Marrow | Cistrome |
| TcoF_01_20637 | Hdac2 | None | Cardiomyocyte | Heart | Cistrome |
| TcoF_01_20636 | Hdac2 | None | Cardiomyocyte | Heart | Cistrome |
| TcoF_01_20635 | Hdac2 | 3T3-L1 | Adipocyte | None | Cistrome |
| TcoF_01_20634 | Hdac2 | 3T3-L1 | Adipocyte | None | Cistrome |
| TcoF_01_20633 | Hdac2 | 3T3-L1 | Adipocyte | None | Cistrome |
| TcoF_01_20632 | Hdac2 | 3T3-L1 | Adipocyte | None | Cistrome |
| TcoF_01_20081 | Hdac2 | None | Myoblast | Skeletal Muscle | Cistrome |
| TcoF_01_20063 | Hdac2 | V6.5 | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_20062 | Hdac2 | V6.5 | Embryonic Stem Cell | Embryo | Cistrome |
Downstream target genes of Hdac2
Protein-protein interaction of Hdac2
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| Hdac2 | THRB | Reconstituted Complex | 10508171 | 10090 | 9606 | BIOGRID |
| Hdac2 | THRA | Reconstituted Complex | 10508171 | 10090 | 9606 | BIOGRID |
| Hdac2 | Yy1 | Affinity Capture-Western | 17220375 | 10090 | 10090 | BIOGRID |
| Hdac2 | Hdac9 | Two-hybrid | 20211142 | 10090 | 10090 | BIOGRID |
| Hdac2 | Nanog | Affinity Capture-Western | 18454139 | 10090 | 10090 | BIOGRID |
| Hdac2 | Pou5f1 | Affinity Capture-Western | 18454139 | 10090 | 10090 | BIOGRID |
| Hdac2 | Sin3a | Affinity Capture-Western | 18454139 | 10090 | 10090 | BIOGRID |
| Hdac2 | Mta1 | Affinity Capture-Western | 18454139 | 10090 | 10090 | BIOGRID |
| Hdac2 | Mta2 | Affinity Capture-Western | 18454139 | 10090 | 10090 | BIOGRID |
| Hdac2 | Mbd3 | Affinity Capture-Western | 18454139 | 10090 | 10090 | BIOGRID |
| Hdac2 | Rbbp7 | Affinity Capture-Western | 18454139 | 10090 | 10090 | BIOGRID |
| Hdac2 | Sin3a | Affinity Capture-Western | 16109738 | 10090 | 10090 | BIOGRID |
| Hdac2 | Sp3 | Affinity Capture-Western | 16109738 | 10090 | 10090 | BIOGRID |
| Hdac2 | Pml | Affinity Capture-Western | 18454139 | 10090 | 10090 | BIOGRID |
| Hdac2 | Pdx1 | Affinity Capture-Western | 15496408 | 10090 | 10090 | BIOGRID |
| Hdac2 | Pdx1 | Reconstituted Complex | 15496408 | 10090 | 10090 | BIOGRID |
| Hdac2 | Zfp932 | Affinity Capture-Western | 21177534 | 10090 | 10090 | BIOGRID |
| Hdac2 | Zfp932 | Reconstituted Complex | 21177534 | 10090 | 10090 | BIOGRID |
| Hdac2 | Hist4h4 | Biochemical Activity | 22441348 | 10090 | 10090 | BIOGRID |
| Hdac2 | Lclat1 | Affinity Capture-Western | 26604221 | 10090 | 10090 | BIOGRID |
| Hdac2 | Chaf1a | Affinity Capture-Western | 26365490 | 10090 | 10090 | BIOGRID |
Annotation of Hdac2
Expression of Hdac2
Disease information of Hdac2