TcoF overview
TcoF: Kdm1a
GeneID: 99982
Name: Lysine-specific histone demethylase 1A
Ensembl: ENSMUSG00000036940
Species: Mouse
Class: NA
Family: Lysine demethylase
Disease: --
Go-trem: 63
Pathway: 7
Super Enhancer:

chr4:136566647-136567318 chr4:136546631-136547782 chr4:136544880-136560320 chr4:136546602-136549413 chr4:136569397-136575963 chr4:136566424-136568381 chr4:136547552-136549441 chr4:136548599-136549475 chr4:136541863-136577631 chr4:136587360-136588458 chr4:136547979-136549520 chr4:136546957-136549464 chr4:136568439-136573694 chr4:136557221-136558496 chr4:136547985-136549477 chr4:136569722-136570583 chr4:136587787-136589103

Enhancer:

chr4:135996780-135997660 chr4:136056150-136063380 chr4:136066020-136077250 chr4:136125100-136126370 chr4:136126450-136127150 chr4:136155620-136158140 chr4:136283480-136293000 chr4:136335520-136341250 chr4:136387640-136391680 chr4:135872390-135872990 chr4:136360520-136365600 chr4:136157900-136158140 chr4:136158000-136158140 chr4:135867000-135867750 chr4:136157230-136158140 chr4:136254500-136255270 chr4:136258390-136258740 chr4:136272270-136272690 chr4:136289180-136289690 chr4:136290210-136290900 chr4:136305460-136307330 chr4:136310100-136313990 chr4:136328050-136329920 chr4:136349320-136349630 chr4:136372510-136372990 chr4:136375620-136376840 chr4:136417180-136418690 chr4:136420950-136421810 chr4:136472590-136473530 chr4:136297810-136298580 chr4:136157970-136158140 chr4:135842390-135842910 chr4:135867000-135867910 chr4:135867000-135867570 chr4:136125450-136126370 chr4:136156430-136158140 chr4:136182030-136182600 chr4:136182730-136183260 chr4:135867000-135868090 chr4:136304540-136308260 chr4:136308350-136311640 chr4:136384600-136390940 chr4:136295540-136300770 chr4:135867000-135869010 chr4:135867000-135867860 chr4:136125340-136126370 chr4:136156460-136158140 chr4:136156820-136158140 chr4:136251420-136251910 chr4:136288220-136292940 chr4:136336060-136340430 chr4:136296420-136300800 chr4:136156390-136158140 chr4:136192270-136193010 chr4:136194020-136196200 chr4:136271400-136273450 chr4:136284930-136290980 chr4:136304320-136314130 chr4:136331050-136344780 chr4:136348350-136351920 chr4:136375540-136391680 chr4:136419930-136424930 chr4:136466320-136476380 chr4:135867000-135870000 chr4:136125760-136126330 chr4:136244540-136245740 chr4:136267900-136271540 chr4:136328150-136328950 chr4:136372390-136373200 chr4:136061030-136062540 chr4:136158080-136158140 chr4:136072200-136076680 chr4:136125350-136126370 chr4:135804030-135806640 chr4:135814550-135816190 chr4:136284830-136288130 chr4:136288200-136290920 chr4:136304570-136308580 chr4:136310170-136313760 chr4:136433890-136434520 chr4:136539380-136540720 chr4:136286140-136287220 chr4:136288240-136289830 chr4:135980040-135980520 chr4:136155510-136158140 chr4:136191840-136193010 chr4:136194020-136195390 chr4:136285240-136291150 chr4:136304200-136308570 chr4:136310000-136312540 chr4:136316730-136323350 chr4:136389780-136391680 chr4:136157450-136158140 chr4:136157470-136158140 chr4:136288260-136290930 chr4:136304580-136308670 chr4:136308790-136315480 chr4:136316670-136319080 chr4:136327550-136330490 chr4:136332050-136333940 chr4:136341870-136344150 chr4:136375580-136377170 chr4:136390720-136391680 chr4:136417250-136419740 chr4:136297880-136300170 chr4:136362650-136365480 chr4:136304520-136315530 chr4:136375440-136379880 chr4:136157630-136158140 chr4:136316570-136319240 chr4:136141680-136147000 chr4:136211340-136211820 chr4:136211980-136213310 chr4:136213510-136214840 chr4:136214990-136215470 chr4:136215690-136216560 chr4:135811430-135813830 chr4:135843230-135843700 chr4:136156180-136158140 chr4:136156070-136158140 chr4:136133700-136134030 chr4:136157380-136158140 chr4:136187050-136188000 chr4:136287010-136288110 chr4:136448470-136448750 chr4:136296630-136299140 chr4:135980110-135980520 chr4:136157480-136158140 chr4:136194020-136194220 chr4:136254330-136255540 chr4:136288350-136290870 chr4:136304600-136309580 chr4:136309800-136315190 chr4:136317160-136318340 chr4:136328000-136330490 chr4:136331900-136333620 chr4:136342620-136343860 chr4:136375580-136377030 chr4:136390790-136391680 chr4:136417380-136419000 chr4:136420100-136422170 chr4:136298080-136300420 chr4:136362850-136364120 chr4:135804930-135805860 chr4:136157850-136158140 chr4:136144710-136148870 chr4:136149040-136158140 chr4:136284130-136291080 chr4:136302880-136309110 chr4:136316450-136323680 chr4:136356330-136365020 chr4:135851180-135852520 chr4:135912590-135913910 chr4:136157400-136158140 chr4:136260130-136261500 chr4:136262070-136263820 chr4:136282690-136283620 chr4:136359960-136361430 chr4:136523830-136524730 chr4:135922800-135925000 chr4:135993600-135996400 chr4:136069600-136077250 chr4:136124580-136126370 chr4:136126450-136128130 chr4:136156400-136158140 chr4:136275740-136277400 chr4:136316200-136322600 chr4:136355600-136362200 chr4:136380400-136391680 chr4:136303600-136307000 chr4:136307800-136314400 chr4:136327600-136330490 chr4:136330550-136335200 chr4:136372400-136378600 chr4:136388200-136390600 chr4:136363400-136365400 chr4:135700290-135700790 chr4:135736490-135736690 chr4:135775780-135776680 chr4:135779610-135780700 chr4:135804030-135805910 chr4:136192910-136193010 chr4:136240750-136242960 chr4:136259800-136261800 chr4:136280210-136281320 chr4:136304580-136307740 chr4:136310100-136312490 chr4:136316200-136320080 chr4:136328090-136330090 chr4:136339070-136340580 chr4:136341720-136343860 chr4:136353240-136354390 chr4:136387490-136391680 chr4:136420660-136421700 chr4:136504950-136506530 chr4:135774140-135775680 chr4:136297920-136299890 chr4:136362250-136364990 chr4:135762560-135763680 chr4:135773690-135777210 chr4:135804030-135805400 chr4:135867000-135867940 chr4:136156340-136158140 chr4:136280250-136281370 chr4:136310190-136312320 chr4:136316870-136318420 chr4:136331940-136333580 chr4:136335520-136340320 chr4:136387680-136391000 chr4:136362190-136365000 chr4:136286460-136288040 chr4:136310760-136312370 chr4:136331940-136333250 chr4:136372440-136373490 chr4:136391540-136391680 chr4:136490590-136490960 chr4:136491050-136491460 chr4:136297390-136299060 chr4:136361920-136363220 chr4:136067700-136068090 chr4:136061690-136062350 chr4:136067540-136068170 chr4:136157620-136158140 chr4:136268260-136268580 chr4:136311190-136311920 chr4:136298490-136298940 chr4:135804030-135807150 chr4:135867000-135867700 chr4:135989060-135990920 chr4:135996600-135997660 chr4:136125150-136126370 chr4:136126450-136127170 chr4:136155660-136158140 chr4:136267370-136268960 chr4:136291060-136293190 chr4:136336060-136341080 chr4:136360310-136365510 chr4:136387650-136391680 chr4:136489820-136490430 chr4:136490500-136490960 chr4:136491050-136491950 chr4:135429010-135429580 chr4:135465200-135466170 chr4:135477060-135478300 chr4:135481110-135481460 chr4:135481600-135483730 chr4:135527620-135528430 chr4:135540420-135541850 chr4:135541930-135542300 chr4:135590580-135591860 chr4:135607210-135607520 chr4:135780950-135781330 chr4:135811560-135813610 chr4:135842390-135842940 chr4:135867000-135869230 chr4:136007460-136008230 chr4:136060740-136062300 chr4:136073940-136076410 chr4:136143600-136145130 chr4:136156730-136158140 chr4:136213570-136214740 chr4:136220920-136221420 chr4:136228190-136228350 chr4:136228420-136228980 chr4:136267140-136268830 chr4:136275680-136276520 chr4:136280360-136281080 chr4:135461780-135463210 chr4:136439110-136441950 chr4:136303880-136315130 chr4:136153870-136155110 chr4:136157260-136158140 chr4:136194020-136194410 chr4:136304760-136307790 chr4:136348260-136351120 chr4:136388960-136391680 chr4:136125820-136126330 chr4:135822140-135823820 chr4:135736840-135737200 chr4:135867000-135867990 chr4:136157120-136158140 chr4:136187050-136187560 chr4:136245280-136247020 chr4:136253970-136255420 chr4:136272180-136273600 chr4:136304560-136315440 chr4:136330550-136341070 chr4:136389590-136391680 chr4:136297730-136300420 chr4:136453900-136454660 chr4:136453750-136454660 chr4:135796110-135796260 chr4:135867000-135867760 chr4:135875740-135876540 chr4:136061210-136062590 chr4:135867000-135868160 chr4:136182190-136182600 chr4:136182730-136183320 chr4:136269030-136270230 chr4:135804030-135806780 chr4:135843230-135845350 chr4:135989130-135991020 chr4:135993240-135996080 chr4:136006190-136008500 chr4:136136160-136144450 chr4:136157830-136158140 chr4:135867000-135867880 chr4:136157820-136158140 chr4:136157870-136158140 chr4:135804030-135806710 chr4:135812000-135812380 chr4:135867000-135868040 chr4:136275850-136276400 chr4:136288310-136289460 chr4:136306740-136307280 chr4:136311180-136312180 chr4:136332200-136333280 chr4:136417530-136418390 chr4:135842390-135842690 chr4:135867000-135868200 chr4:136157130-136158140 chr4:136194020-136194080 chr4:135804030-135806580 chr4:136361900-136366300 chr4:135868540-135869200 chr4:135989900-135990590 chr4:136125710-136126370 chr4:136126450-136126880 chr4:136153850-136154950 chr4:135822620-135823920 chr4:136154020-136154550 chr4:136181910-136182600 chr4:136182730-136183230 chr4:136269160-136271080 chr4:136304620-136307360 chr4:136157860-136158140 chr4:136317540-136318670 chr4:136297710-136299170 chr4:136284770-136290840 chr4:136304550-136308580 chr4:136310610-136312040 chr4:136440470-136441950 chr4:136454050-136454660 chr4:135994730-135995270 chr4:136154180-136154590 chr4:136228420-136229100 chr4:136286300-136286860 chr4:136288290-136289130 chr4:136306650-136307080 chr4:136311110-136311770 chr4:136332260-136333110 chr4:136434100-136434500

Promoter:

chr4:136600723-136604723

 ChIP-seq based regulatory details of Kdm1a
Sample ID Experiment target Biosample term name Cell type Tissue type Source
TcoF_01_21668 Kdm1a C2C12 Myoblast Muscle Cistrome
TcoF_01_21667 Kdm1a None Macrophage Bone Marrow Cistrome
TcoF_01_21666 Kdm1a None Macrophage Bone Marrow Cistrome
TcoF_01_21665 Kdm1a None Macrophage Bone Marrow Cistrome
TcoF_01_21664 Kdm1a None Macrophage Bone Marrow Cistrome
TcoF_01_21663 Kdm1a None Trophoblast Stem Cell None Cistrome
TcoF_01_21662 Kdm1a C2C12 Myoblast Muscle Cistrome
TcoF_01_21661 Kdm1a C2C12 Myoblast Muscle Cistrome
TcoF_01_21660 Kdm1a None Embryonic Stem Cell None Cistrome
TcoF_01_21659 Kdm1a Ba/F3 B Lymphocyte None Cistrome
TcoF_01_21658 Kdm1a Ba/F3 B Lymphocyte None Cistrome
TcoF_01_21657 Kdm1a Ba/F3 B Lymphocyte None Cistrome
TcoF_01_21656 Kdm1a Ba/F3 B Lymphocyte None Cistrome
TcoF_01_21655 Kdm1a None Neural Stem Cell None Cistrome
TcoF_01_21654 Kdm1a None Neural Stem Cell None Cistrome
TcoF_01_21653 Kdm1a MEL Erythroid Progenitor Cell None Cistrome
TcoF_01_21652 Kdm1a None Cortical Neuron Neuric Cistrome
TcoF_01_21651 Kdm1a None Cortical Neuron Neuric Cistrome
TcoF_01_21650 Kdm1a None Cortical Neuron Neuric Cistrome
TcoF_01_21649 Kdm1a None Cortical Neuron Neuric Cistrome
TcoF_01_21648 Kdm1a None Cortical Neuron Neuric Cistrome
TcoF_01_21647 Kdm1a None Cortical Neuron Neuric Cistrome
TcoF_01_21646 Kdm1a None Cortical Neuron Neuric Cistrome
TcoF_01_21645 Kdm1a None Cortical Neuron Neuric Cistrome
TcoF_01_21644 Kdm1a J1 Embryonic Stem Cell Embryo Cistrome
TcoF_01_21643 Kdm1a J1 Embryonic Stem Cell Embryo Cistrome
TcoF_01_21642 Kdm1a J1 Embryonic Stem Cell Embryo Cistrome
TcoF_01_21641 Kdm1a J1 Embryonic Stem Cell Embryo Cistrome
TcoF_01_21640 Kdm1a 3T3-L1 Preadipocyte Adipose Cistrome
TcoF_01_21639 Kdm1a 3T3-L1 Preadipocyte Adipose Cistrome
TcoF_01_21638 Kdm1a 3T3-L1 Preadipocyte Adipose Cistrome
TcoF_01_21637 Kdm1a 3T3-L1 Preadipocyte Adipose Cistrome
TcoF_01_21636 Kdm1a C2C12 Myoblast Muscle Cistrome
TcoF_01_21635 Kdm1a C2C12 Myoblast Muscle Cistrome
TcoF_01_21634 Kdm1a None Embryonic Stem Cell Embryo Cistrome
TcoF_01_21633 Kdm1a None Granulocytic Progenitor Cell Bone Marrow Cistrome
TcoF_01_21632 Kdm1a None Pachynema Cell None Cistrome
TcoF_01_21631 Kdm1a None Spermatid None Cistrome
TcoF_01_21630 Kdm1a V6.5 Embryonic Stem Cell Embryo Cistrome
TcoF_01_21629 Kdm1a V6.5 Embryonic Stem Cell Embryo Cistrome
 Downstream target genes of Kdm1a
 Upstream regulatory details of Kdm1a
 Protein-protein interaction of Kdm1a
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
Kdm1a Nanog Affinity Capture-Western 18454139 10090 10090 BIOGRID
Kdm1a Ar Affinity Capture-Western 16079795 10090 10090 BIOGRID
Kdm1a Ar Co-localization 16079795 10090 10090 BIOGRID
Kdm1a Kdm4c Affinity Capture-Western 17277772 10090 10090 BIOGRID
Kdm1a Kdm4c Co-purification 17277772 10090 10090 BIOGRID
Kdm1a Ar Co-purification 17277772 10090 10090 BIOGRID
Kdm1a Kdm4c Reconstituted Complex 17277772 10090 10090 BIOGRID
Kdm1a Mef2d Affinity Capture-Western 20833138 10090 10090 BIOGRID
Kdm1a Myod1 Affinity Capture-Western 20833138 10090 10090 BIOGRID
Kdm1a Chaf1a Affinity Capture-Western 26365490 10090 10090 BIOGRID
Kdm1a Rcor1 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Gse1 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Rreb1 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Zfp516 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Sfmbt2 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Rcor2 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Hdac1 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Zmym2 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Rcor3 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Hdac2 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Supt5 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Trim14 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Xpo5 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Adnp Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Ctbp2 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Ctbp1 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Polr2a Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Kdm5a Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Cope Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Rnf2 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Trim21 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Sepsecs Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Supt16 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Hmg20b Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Pds5a Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Hmg20a Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Dhx15 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Esrrb Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Msh6 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Phf21a Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Mcm2 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Hmgb2 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Chd4 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Mta3 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Usp7 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Phc2 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Rpa1 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Lta4h Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Pspc1 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Fpgs Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Tfap2c Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Dnaja1 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Eml2 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Sec23ip Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Polr2b Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Sugt1 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Ik Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Ap2m1 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Cdc23 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Edc3 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Ddx1 Affinity Capture-MS 26206133 10090 10090 BIOGRID
Kdm1a Rbpj Affinity Capture-Western 27112428 10090 10090 BIOGRID
Kdm1a Rcor2 Affinity Capture-Western 27112428 10090 10090 BIOGRID
Kdm1a Hes1 Co-localization 27112428 10090 10090 BIOGRID
 Annotation of Kdm1a
 Disease information of Kdm1a