TcoF overview
TcoF: Kdm2a
GeneID: 225876
Name: Lysine-specific demethylase 2A
Ensembl: ENSMUSG00000054611
Species: Mouse
Class: NA
Family: Lysine demethylase
Disease: --
Go-trem: 20
Pathway: 2
Super Enhancer:

chr19:4332627-4334702 chr19:4332551-4335079 chr19:4332531-4334718 chr19:4369994-4372933 chr19:4332519-4335162 chr19:4332542-4335161 chr19:4332607-4335351 chr19:4332407-4334582 chr19:4332514-4335720 chr19:4328824-4335561 chr19:4328559-4334588 chr19:4332763-4335286 chr19:4332441-4334723 chr19:4332791-4334902 chr19:4387409-4400057 chr19:4329964-4334866 chr19:4332633-4334972 chr19:4332395-4334536 chr19:4332440-4335129 chr19:4332455-4335438 chr19:4321688-4334808 chr19:4332614-4335167 chr19:4333261-4334851 chr19:4332617-4335155 chr19:4330879-4335191 chr19:4329909-4335209 chr19:4387206-4388338 chr19:4332541-4335256 chr19:4332566-4335368 chr19:4333234-4334692 chr19:4332437-4334788 chr19:4332635-4334807 chr19:4332143-4334497 chr19:4328913-4334360 chr19:4332608-4333135 chr19:4321894-4347024

Enhancer:

chr19:3647650-3649400 chr19:3659640-3686350 chr19:3767730-3768020 chr19:3831220-3834050 chr19:3852410-3858880 chr19:3878900-3884470 chr19:3904700-3905070 chr19:3922320-3923730 chr19:3972610-3975980 chr19:3986610-3986820 chr19:3998560-3998950 chr19:4000840-4001190 chr19:4001320-4001620 chr19:4011420-4012550 chr19:4033830-4035410 chr19:4035930-4036680 chr19:4036790-4037100 chr19:4037190-4037280 chr19:4037390-4037580 chr19:4037620-4037860 chr19:4041480-4041580 chr19:4086590-4087110 chr19:4097500-4097810 chr19:4097910-4098000 chr19:4098130-4098490 chr19:4100210-4100620 chr19:4101260-4102600 chr19:4110650-4110840 chr19:4111690-4111860 chr19:4112250-4112320 chr19:4116170-4117560 chr19:4121570-4125720 chr19:4126200-4127050 chr19:4127120-4127540 chr19:4127630-4127750 chr19:4127830-4131030 chr19:4137210-4138540 chr19:4138690-4138770 chr19:4138800-4139200 chr19:4140400-4142420 chr19:4148730-4149340 chr19:4149540-4149860 chr19:4149980-4150080 chr19:4150210-4150430 chr19:4150620-4150700 chr19:4150820-4151390 chr19:4151720-4152520 chr19:4152570-4153220 chr19:4153490-4153590 chr19:4154700-4155920 chr19:4156710-4156970 chr19:4162720-4162820 chr19:4162860-4163160 chr19:4166560-4168320 chr19:4168380-4169520 chr19:4169800-4169890 chr19:4170130-4170820 chr19:4171170-4171410 chr19:4171890-4172140 chr19:4173220-4173880 chr19:4190830-4191010 chr19:4192270-4192740 chr19:4192870-4193020 chr19:4193250-4193760 chr19:4194690-4194770 chr19:4194900-4194980 chr19:4196080-4196180 chr19:4196380-4197110 chr19:4197250-4197330 chr19:4197400-4197470 chr19:4197580-4197670 chr19:4197780-4200270 chr19:4200570-4200920 chr19:4201050-4201320 chr19:4201390-4201480 chr19:4214630-4215730 chr19:4220340-4222070 chr19:4238650-4241330 chr19:4282300-4282880 chr19:4293980-4294840 chr19:4294920-4305120 chr19:4305190-4305900 chr19:4326890-4328120 chr19:4328250-4328950 chr19:4329220-4331180 chr19:4331260-4337350 chr19:4394890-4396310 chr19:4408420-4410050 chr19:4436980-4439210 chr19:4439420-4439550 chr19:4451060-4452270 chr19:4452390-4453760 chr19:4461480-4467520 chr19:4487280-4496780 chr19:4510580-4515650 chr19:4594440-4601590 chr19:4602370-4602470 chr19:4602870-4603050 chr19:4604580-4607530 chr19:4607690-4609860 chr19:4610040-4611780 chr19:4612630-4613150 chr19:4614510-4614960 chr19:4615660-4617570 chr19:4617720-4617960 chr19:4618050-4618140 chr19:4618520-4618950 chr19:4619190-4619310 chr19:4620020-4620110 chr19:4620290-4620360 chr19:4620960-4621030 chr19:4623240-4623500 chr19:4623560-4623820 chr19:4623950-4624010 chr19:4624180-4624680 chr19:4624760-4625010 chr19:4625090-4625190 chr19:4625290-4625430 chr19:4626190-4627160 chr19:4756660-4757240 chr19:4757660-4761970 chr19:4765940-4766910 chr19:4785560-4787360 chr19:4801800-4802470 chr19:4804010-4811170 chr19:4833510-4834170 chr19:4927050-4928210 chr19:5094800-5098180 chr19:4603210-4604460 chr19:4794000-4800560 chr19:4193870-4194460 chr19:4214630-4215240 chr19:4268880-4269010 chr19:4294370-4294840 chr19:4333300-4334120 chr19:4058840-4059250 chr19:4101260-4102580 chr19:4110990-4111070 chr19:4172230-4172950 chr19:4175030-4175390 chr19:4296170-4305120 chr19:4330880-4331180 chr19:4331260-4335220 chr19:4460870-4463670 chr19:4476280-4476930 chr19:4492350-4494240 chr19:4495760-4496780 chr19:4533350-4538030 chr19:4553580-4561710 chr19:4576870-4580390 chr19:4594440-4600520 chr19:4620610-4620810 chr19:4518560-4526100 chr19:4293560-4294510 chr19:4302470-4305120 chr19:4333260-4334240 chr19:4169180-4169520 chr19:4268720-4269010 chr19:4332620-4334110 chr19:4170130-4170420 chr19:4172230-4172340 chr19:4395270-4396310 chr19:4510580-4512040 chr19:4615660-4616230 chr19:4295360-4298090 chr19:4303660-4305120 chr19:4395860-4396310 chr19:4055000-4057480 chr19:4116170-4118080 chr19:4185070-4185350 chr19:4185500-4187940 chr19:4189050-4189210 chr19:4189310-4189400 chr19:4189510-4189860 chr19:4189960-4190660 chr19:4282620-4282880 chr19:4293490-4294840 chr19:4294920-4297130 chr19:4331260-4335130 chr19:4475260-4476080 chr19:3922950-3923730 chr19:3928720-3929690 chr19:3973320-3974750 chr19:4103480-4104810 chr19:4188130-4188240 chr19:4290160-4290390 chr19:4290520-4290600 chr19:4290870-4291230 chr19:4292840-4294840 chr19:4332010-4334980 chr19:4214630-4215490 chr19:4293550-4294840 chr19:4297270-4305120 chr19:4475250-4476660 chr19:4510580-4511300 chr19:4268580-4269010 chr19:4295940-4305120 chr19:4331470-4335560 chr19:4470500-4476930 chr19:4487140-4496780 chr19:4510580-4512180 chr19:4711640-4715860 chr19:4111180-4111580 chr19:4151820-4152520 chr19:4162320-4162600 chr19:4170910-4170990 chr19:4172230-4172600 chr19:4174720-4175000 chr19:4190160-4190660 chr19:4197780-4199160 chr19:4200370-4200460 chr19:4266630-4267740 chr19:4295660-4305120 chr19:4319280-4319660 chr19:4331730-4335520 chr19:4394970-4396310 chr19:4437830-4439210 chr19:4472380-4476930 chr19:4510580-4512120 chr19:4577080-4580310 chr19:4609170-4609860 chr19:4626190-4626960 chr19:4190320-4190660 chr19:4218900-4219160 chr19:4281200-4281910 chr19:4293780-4294840 chr19:4294920-4297040 chr19:4331730-4334550 chr19:4438720-4439210 chr19:4510580-4511320 chr19:4333700-4334530 chr19:4409110-4409690 chr19:4175200-4175390 chr19:4268810-4269010 chr19:4333280-4334240 chr19:4756660-4756810 chr19:4811060-4811170 chr19:4112010-4112100 chr19:4115490-4115980 chr19:4151490-4151570 chr19:4151890-4152520 chr19:4197780-4198120 chr19:4329970-4331180 chr19:4331260-4335780 chr19:4214630-4215410 chr19:4294920-4295850 chr19:4298800-4305120 chr19:4329220-4330680 chr19:4192270-4192350 chr19:4332880-4334090 chr19:4293020-4294840 chr19:4331260-4335770 chr19:4475650-4476930 chr19:4510580-4511890 chr19:4718990-4722950 chr19:4717890-4718810 chr19:4127830-4128000 chr19:4172230-4172430 chr19:4190370-4190660 chr19:4267360-4267740 chr19:4332450-4334930 chr19:4395840-4396310 chr19:4332740-4335070 chr19:4396190-4396310 chr19:4332280-4335330 chr19:4127830-4128090 chr19:4157190-4157480 chr19:4157590-4157680 chr19:4157780-4157870 chr19:4297990-4305120 chr19:4329620-4331180 chr19:4331260-4335110 chr19:4161690-4162250 chr19:4331260-4335490 chr19:4437790-4439210 chr19:4510580-4511590 chr19:4293640-4294840 chr19:4294920-4295560 chr19:4322100-4322380 chr19:4333780-4334340 chr19:4408410-4409490 chr19:4461840-4462540 chr19:4510580-4510830 chr19:4395760-4396310 chr19:4395940-4396310 chr19:4300880-4303640 chr19:4332310-4335820 chr19:4190460-4190660 chr19:4294920-4297000 chr19:4304260-4305120 chr19:4332050-4335350 chr19:4475520-4476930 chr19:4492690-4493300 chr19:4510580-4511460 chr19:4439670-4440730 chr19:4332940-4334320 chr19:4428980-4430880 chr19:4301590-4303450 chr19:4305580-4305900 chr19:4333260-4334790 chr19:4396060-4396310 chr19:4332560-4334520 chr19:4190220-4190660 chr19:4299220-4305120 chr19:4331260-4335610 chr19:4395310-4396310 chr19:3852410-3852750 chr19:3854740-3856270 chr19:3928740-3929690 chr19:3986950-3987050 chr19:3987300-3987730 chr19:3988230-3988390 chr19:3994740-3995210 chr19:3995940-3996520 chr19:4055140-4057330 chr19:4098130-4098250 chr19:4305390-4305900 chr19:4437870-4439210 chr19:4492440-4494230 chr19:4496550-4496780 chr19:4510580-4511820 chr19:4555070-4555610 chr19:4592950-4594310 chr19:4595210-4596760 chr19:4597420-4598330 chr19:4615660-4616630 chr19:4626190-4626760 chr19:4718990-4722090 chr19:4757660-4758070 chr19:4810560-4811170 chr19:4855480-4855690 chr19:4855790-4856060 chr19:3832740-3834730 chr19:3997440-3997800 chr19:4568490-4571380 chr19:4193870-4193970 chr19:3630470-3637000 chr19:3678600-3686350 chr19:3831400-3836000 chr19:3852410-3854240 chr19:3928910-3929690 chr19:3968800-3969760 chr19:3972610-3973800 chr19:3987300-3987600 chr19:4032200-4035410 chr19:4035660-4035820 chr19:4041690-4041900 chr19:4041930-4042160 chr19:4267200-4267740 chr19:4295400-4305120 chr19:4331260-4336000 chr19:4438000-4439210 chr19:4475630-4476930 chr19:4494800-4496780 chr19:4510580-4511900 chr19:4592600-4594310 chr19:4594440-4597600 chr19:4615660-4616600 chr19:4624200-4624680 chr19:4626190-4626930 chr19:4672160-4674200 chr19:4715600-4718810 chr19:4718990-4722800 chr19:4808000-4811170 chr19:5105250-5106920 chr19:4563800-4573000 chr19:3664200-3672200 chr19:4150210-4150400 chr19:3852410-3852810 chr19:4101260-4101830 chr19:4170130-4170630 chr19:4239710-4241050 chr19:4300080-4303580 chr19:4305490-4305900 chr19:4332440-4334950 chr19:4396080-4396310 chr19:4438280-4439210 chr19:4476220-4476930 chr19:4711640-4713550 chr19:4810580-4811170 chr19:4439670-4440560 chr19:4300800-4304010 chr19:4305420-4305900 chr19:4332290-4335260 chr19:4439790-4440570 chr19:4131070-4131220 chr19:4131280-4131360 chr19:4166560-4167870 chr19:4297230-4305120 chr19:4332020-4335370 chr19:4553640-4571400 chr19:4170130-4170440 chr19:4219760-4220170 chr19:4268800-4269010 chr19:4294420-4294750 chr19:4300900-4305120 chr19:4162020-4162250 chr19:4565060-4572390 chr19:4304300-4305120 chr19:4332040-4334820 chr19:4170130-4170470 chr19:4193250-4193520 chr19:4294180-4294840 chr19:4294920-4295800 chr19:4304060-4305120 chr19:4332570-4335140 chr19:4396040-4396310 chr19:4438870-4439210 chr19:4476620-4476930 chr19:4578610-4579310 chr19:4589680-4590770 chr19:4626190-4626550 chr19:4719670-4721110 chr19:4173220-4175000 chr19:4220340-4221940 chr19:4282040-4282160 chr19:4301770-4305120 chr19:4331260-4336940 chr19:4437010-4439210 chr19:4476160-4476930 chr19:4490140-4494490 chr19:4510580-4512510 chr19:4535230-4538470 chr19:4546370-4549910 chr19:4615660-4617180 chr19:4515690-4523900 chr19:4295120-4297090 chr19:4475370-4476000 chr19:3852410-3853000 chr19:3929440-3929690 chr19:4033960-4035150 chr19:4126200-4126910 chr19:4293800-4294840 chr19:4294920-4295520 chr19:4301600-4305120 chr19:4330390-4331180 chr19:4331600-4335020 chr19:4408190-4409720 chr19:3832760-3833460 chr19:4267340-4267740 chr19:4331260-4335380 chr19:4396000-4396310 chr19:4101260-4102490 chr19:4292960-4294840 chr19:4437530-4439210 chr19:4474380-4476110 chr19:4170130-4170620 chr19:4196380-4196960 chr19:4301490-4305120 chr19:4331560-4335140 chr19:4570530-4572470 chr19:4718990-4719840 chr19:4220850-4221740 chr19:4293270-4294840 chr19:4332570-4334300 chr19:4395690-4396310 chr19:4408550-4409530 chr19:4510580-4510750 chr19:4115220-4115310 chr19:4219170-4220170 chr19:4217520-4220170 chr19:4294920-4297100 chr19:4298780-4303930 chr19:4111230-4111580 chr19:4127830-4128040 chr19:4172230-4172500 chr19:4190600-4190660 chr19:4199990-4200270 chr19:4264100-4264310 chr19:4264460-4265100 chr19:4281480-4281910 chr19:4329960-4331180 chr19:4437310-4439210 chr19:4476270-4476930 chr19:4492510-4494070 chr19:4510580-4511830 chr19:4627240-4627540 chr19:4716170-4718810 chr19:4567040-4572430 chr19:4305450-4305900 chr19:4333360-4334310 chr19:4127630-4127720 chr19:4627240-4627440 chr19:4218940-4220170 chr19:4293540-4294840 chr19:4332660-4334500 chr19:4226740-4227470 chr19:4220340-4221190 chr19:4303490-4305120 chr19:4332640-4335520 chr19:4476600-4476930 chr19:4496660-4496780 chr19:4719680-4721870 chr19:4568880-4571300 chr19:4333060-4334600 chr19:4333390-4334280 chr19:4605300-4606320 chr19:4440570-4441710 chr19:4151770-4152520 chr19:4163100-4163160 chr19:4395730-4396310 chr19:4408620-4409780 chr19:4437540-4439210 chr19:4474220-4476930 chr19:4510580-4511940 chr19:4712230-4714250 chr19:4718990-4721170 chr19:4717380-4718810 chr19:4163070-4163160 chr19:4190170-4190660 chr19:4192270-4192680 chr19:4217940-4220170 chr19:4293610-4294840 chr19:4294920-4302750 chr19:4302870-4305120 chr19:4332630-4335540 chr19:4408690-4409760 chr19:4474680-4476930 chr19:4103480-4104320 chr19:4190480-4190660 chr19:4510580-4511100 chr19:4589630-4590380 chr19:4098380-4098490 chr19:4126200-4126630 chr19:4293480-4294840 chr19:4296230-4299850 chr19:4332800-4334650 chr19:4170130-4170780 chr19:4319280-4320150 chr19:4332700-4334570 chr19:4329220-4329380 chr19:4055280-4057480 chr19:4301670-4305120 chr19:4332290-4334820 chr19:4492440-4495190 chr19:4510580-4512200 chr19:4535740-4537130 chr19:4578320-4579670 chr19:4592820-4594310 chr19:4594440-4596130 chr19:4597460-4598760 chr19:4617260-4617570 chr19:4214630-4214990 chr19:4268820-4269010 chr19:4282720-4282880 chr19:4294320-4294840 chr19:4333200-4334410 chr19:4510580-4511090 chr19:4720900-4721290 chr19:4440240-4440610

Promoter:

chr19:4395077-4399077

 ChIP-seq based regulatory details of Kdm2a
Sample ID Experiment target Biosample term name Cell type Tissue type Source
TcoF_01_21670 Kdm2a V6.5 Embryonic Stem Cell Embryo Cistrome
TcoF_01_21669 Kdm2a V6.5 Embryonic Stem Cell Embryo Cistrome
 Downstream target genes of Kdm2a
 Upstream regulatory details of Kdm2a
 Protein-protein interaction of Kdm2a
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
Kdm2a Elf1 Co-fractionation 32325033 10090 10090 BIOGRID
Kdm2a Vdac2 Co-fractionation 32325033 10090 10090 BIOGRID
 Annotation of Kdm2a
 Disease information of Kdm2a