TcoF overview
| TcoF: | Kdm4c | |
| GeneID: | 76804 | |
| Name: | Jumonji domain containing 2C | |
| Ensembl: | ENSMUSG00000028397 | |
| Species: | Mouse | |
| Class: | class 3 | |
| Family: | Lysine demethylase | |
| Disease: | -- | |
| Go-trem: | 23 | |
| Pathway: | 2 | |
| Super Enhancer: | chr4:74296657-74296996 chr4:74271029-74271534 chr4:74585876-74586639 chr4:74340133-74340732 chr4:74796198-74798809 chr4:74408919-74409632 chr4:74292507-74294068 chr4:74748054-74748741 chr4:74259529-74260008 chr4:74254131-74271451 chr4:74367272-74368356 chr4:74580445-74580828 chr4:74256679-74262699 chr4:74280021-74280468 chr4:74261356-74262012 chr4:74259118-74259995 chr4:74796374-74799049 chr4:74257825-74259837 chr4:74367761-74368277 chr4:74231023-74231833 chr4:74793310-74793868 chr4:74580503-74580761 chr4:74419832-74420280 chr4:74419479-74420474 chr4:74279928-74280837 chr4:74357273-74360830 chr4:74261714-74262479 chr4:74399499-74400141 |
|
| Enhancer: |
chr4:73896560-73897780 chr4:73897990-73901020 chr4:73897590-73897780 chr4:73897990-73898530 chr4:73896830-73897780 chr4:73897990-73898970 chr4:73897270-73897780 chr4:73897990-73898570 chr4:73897210-73897780 chr4:73897990-73898680 chr4:73897990-73898670 chr4:73897240-73897780 chr4:73897990-73898950 chr4:73896760-73897780 chr4:73897990-73899380 chr4:73896800-73897780 chr4:73897990-73898500 chr4:73896650-73897780 chr4:73897990-73898690 chr4:73897990-73898940 chr4:73896350-73897780 chr4:73897990-73899370 chr4:73896810-73897780 chr4:73897990-73899300 chr4:73896700-73897780 chr4:73897990-73899470 chr4:73897290-73897780 chr4:73897990-73898510 chr4:73897990-73899290 chr4:73896910-73897780 chr4:73897990-73900600 chr4:73901770-73908710 chr4:73896970-73897780 chr4:73897990-73898980 chr4:73905400-73905840 chr4:73659820-73660430 chr4:73897990-73908710 chr4:73896900-73897780 chr4:73897990-73899220 chr4:73897990-73898620 chr4:73896610-73897780 chr4:73897990-73898640 chr4:73897230-73897780 chr4:73595830-73596470 chr4:73897990-73899050 chr4:74234510-74235050 chr4:73897370-73897780 chr4:73897990-73898660 chr4:73897380-73897780 chr4:73897220-73897780 chr4:73897990-73898230 chr4:73896470-73897780 chr4:73897990-73899400 chr4:73897300-73897780 chr4:73897990-73898770 chr4:73897990-73898630 chr4:73897990-73899260 chr4:73896660-73897780 chr4:73897990-73900300 chr4:73896850-73897780 chr4:73897990-73900770 chr4:73925460-73926800 chr4:73906420-73908710 chr4:73896870-73897780 chr4:73897990-73898830 chr4:73896920-73897780 chr4:73897990-73899210 chr4:73896770-73897780 chr4:73896860-73897780 chr4:73897990-73898840 chr4:73904850-73905610 chr4:73659820-73660840 chr4:73897430-73897780 chr4:73897990-73898700 chr4:73897030-73897780 chr4:73897990-73898850 chr4:73896750-73897780 chr4:73897990-73901890 chr4:73903200-73906820 chr4:73897390-73897780 chr4:73897990-73898870 chr4:73896240-73897780 chr4:73897150-73897780 chr4:73897990-73898380 chr4:73897990-73898960 chr4:73897350-73897780 chr4:73897990-73898580 chr4:73896990-73897780 chr4:73896840-73897780 chr4:73897990-73898170 chr4:73897080-73897780 chr4:73897990-73898160 chr4:73897250-73897780 chr4:73897990-73899130 chr4:73905200-73905700 chr4:73897990-73898730 chr4:73897990-73898710 chr4:73905270-73906020 |
|
| Promoter: |
chr4:74240496-74244496 |
ChIP-seq based regulatory details of Kdm4c
| Sample ID | Experiment target | Biosample term name | Cell type | Tissue type | Source |
|---|---|---|---|---|---|
| TcoF_01_20580 | Kdm4c | None | Embryonic Stem Cell | None | Cistrome |
| TcoF_01_20579 | Kdm4c | None | Embryonic Stem Cell | None | Cistrome |
| TcoF_01_20578 | Kdm4c | None | Embryonic Stem Cell | None | Cistrome |
| TcoF_01_20577 | Kdm4c | None | Embryonic Stem Cell | None | Cistrome |
| TcoF_01_20433 | Kdm4c | None | Granulocyte Monocyte Progenitor | None | Cistrome |
| TcoF_01_20432 | Kdm4c | None | Granulocyte Monocyte Progenitor | None | Cistrome |
| TcoF_01_20210 | Kdm4c | None | Embryonic Fibroblast | Embryo | Cistrome |
| TcoF_01_20209 | Kdm4c | None | Embryonic Fibroblast | Embryo | Cistrome |
| TcoF_01_20208 | Kdm4c | None | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_20207 | Kdm4c | None | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_20179 | Kdm4c | None | Embryonic Stem Cell | Embryo | Cistrome |
Downstream target genes of Kdm4c
Protein-protein interaction of Kdm4c
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| Kdm4c | Esr1 | Affinity Capture-Western | 21445275 | 10090 | 10090 | BIOGRID |
| Kdm4c | Pbrm1 | Affinity Capture-Western | 21445275 | 10090 | 10090 | BIOGRID |
| Kdm4c | Smarca4 | Affinity Capture-Western | 21445275 | 10090 | 10090 | BIOGRID |
| Kdm4c | Arid1b | Affinity Capture-Western | 21445275 | 10090 | 10090 | BIOGRID |
| Kdm4c | Ar | Affinity Capture-Western | 17277772 | 10090 | 10090 | BIOGRID |
| Kdm4c | HIST3H3 | Biochemical Activity | 17277772 | 10090 | 9606 | BIOGRID |
| Kdm4c | Kdm4b | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
Annotation of Kdm4c
Expression of Kdm4c
Disease information of Kdm4c