TcoF overview
TcoF: Kdm5b
GeneID: 75605
Name: Lysine-specific demethylase 5B
Ensembl: ENSMUSG00000042207
Species: Mouse
Class: NA
Family: Lysine demethylase
Disease: --
Go-trem: 31
Pathway: 3
Super Enhancer:

chr1:134587736-134588102 chr1:134577610-134578203 chr1:134582968-134584288 chr1:134643584-134644574 chr1:134596131-134607637 chr1:134608746-134609798 chr1:134606204-134615468 chr1:134614540-134615534 chr1:134595850-134615551 chr1:134573002-134581434 chr1:134629292-134629917

Enhancer:

chr1:136258200-136258330 chr1:136303720-136304150 chr1:136304280-136304980 chr1:136312160-136312240 chr1:136312560-136319490 chr1:136391380-136394480 chr1:136645990-136658480 chr1:136695580-136699670 chr1:136700290-136703000 chr1:136712020-136717750 chr1:136728400-136730320 chr1:136795180-136798950 chr1:136799080-136800550 chr1:136804380-136814420 chr1:136457110-136472950 chr1:136609130-136612150 chr1:136303240-136303410 chr1:136312560-136312770 chr1:136423100-136424050 chr1:136713220-136713460 chr1:136092540-136092870 chr1:136129380-136130190 chr1:136391380-136391570 chr1:136596050-136596310 chr1:136616180-136616670 chr1:136610080-136611000 chr1:136312560-136313450 chr1:136404460-136407610 chr1:136761880-136762350 chr1:136405860-136407280 chr1:136674030-136675280 chr1:135974280-135975480 chr1:135988520-135997810 chr1:136239990-136242110 chr1:136303030-136303170 chr1:136405570-136407220 chr1:136859360-136859980 chr1:137030500-137031010 chr1:137164770-137165550 chr1:136312560-136313200 chr1:136473390-136475180 chr1:136631570-136635890 chr1:136645990-136656770 chr1:136196040-136197040 chr1:136303240-136303620 chr1:136409650-136410780 chr1:136114190-136115100 chr1:136604450-136606100 chr1:136616040-136616980 chr1:136117420-136118370 chr1:136197110-136200180 chr1:136697040-136699670 chr1:136700290-136703150 chr1:135962940-135964660 chr1:136223530-136223830 chr1:136240530-136241320 chr1:136256940-136257330 chr1:136315270-136316860 chr1:136436970-136437510 chr1:136329920-136331050 chr1:136422400-136424740 chr1:136241070-136241740 chr1:136436910-136437510 chr1:136195400-136195600 chr1:136196040-136196330 chr1:136305060-136306170 chr1:136319730-136320530 chr1:136312560-136313280 chr1:136605290-136606410 chr1:136609840-136611000 chr1:136604980-136606740 chr1:136609800-136611080 chr1:136409840-136410410 chr1:135985730-135986220 chr1:135986750-135997810 chr1:136046060-136047050 chr1:136047180-136047680 chr1:136090300-136090390 chr1:136090520-136091150 chr1:136093630-136093920 chr1:136094120-136094300 chr1:136094440-136094970 chr1:136095130-136095790 chr1:136100160-136116910 chr1:136253750-136257330 chr1:136312560-136319070 chr1:136319140-136319490 chr1:136320650-136321320 chr1:136321490-136322480 chr1:136322670-136324650 chr1:136324840-136325830 chr1:136355240-136355690 chr1:136356050-136359450 chr1:136472980-136481660 chr1:136643460-136644050 chr1:137031200-137031400 chr1:137034030-137034340 chr1:137034450-137035700 chr1:137035850-137037730 chr1:137052840-137054600 chr1:137094960-137097020 chr1:136457110-136462480 chr1:136312560-136314670 chr1:136314800-136317720 chr1:136320650-136320870 chr1:136322670-136324460 chr1:136356710-136358630 chr1:136391380-136393750 chr1:136501200-136502280 chr1:136200350-136200860 chr1:136240810-136241950 chr1:136312560-136317740 chr1:136648500-136652760 chr1:136653640-136654260 chr1:136655150-136657590 chr1:136697440-136699670 chr1:136700290-136701550 chr1:136713130-136714510 chr1:136719250-136720280 chr1:136743570-136744720 chr1:136754140-136756160 chr1:136788150-136788730 chr1:136815260-136816150 chr1:136312560-136312700 chr1:136409810-136410140 chr1:136312560-136312680 chr1:136312560-136319200 chr1:136425120-136437510 chr1:136457110-136481730 chr1:136240560-136241680 chr1:136304380-136304980 chr1:136305060-136305280 chr1:136312560-136312800 chr1:136699360-136699670 chr1:136700290-136701290 chr1:136409650-136411200 chr1:136106720-136108870 chr1:136195710-136195860 chr1:136240190-136241450 chr1:136257500-136258110 chr1:136409710-136410660 chr1:136604800-136606850 chr1:136663860-136664720 chr1:136700290-136700780 chr1:136412340-136414110 chr1:136107280-136108650 chr1:136198910-136200180 chr1:136217160-136217630 chr1:136240540-136241790 chr1:136302630-136302880 chr1:136312560-136312820 chr1:136646410-136646950 chr1:136650290-136651250 chr1:136683480-136685350 chr1:136700290-136701500 chr1:136713170-136714450 chr1:136412500-136414040 chr1:136707710-136709530 chr1:136304280-136304820 chr1:136324840-136325760 chr1:136355240-136359650 chr1:136421650-136424180 chr1:136637180-136637410 chr1:136638550-136640080 chr1:136640200-136640530 chr1:136640700-136640960 chr1:136303720-136303790 chr1:136312560-136319050 chr1:136409840-136411020 chr1:136643750-136644050 chr1:136700290-136702620 chr1:136711180-136714900 chr1:136412430-136413990 chr1:136315010-136317550 chr1:136651840-136652460 chr1:136680640-136682380 chr1:136696880-136699670 chr1:136700290-136702050 chr1:136128820-136130410 chr1:136241260-136241520 chr1:136312560-136313130 chr1:136315040-136316970 chr1:136409760-136411120 chr1:136605510-136606160 chr1:136650620-136651250 chr1:136651400-136653470 chr1:136680040-136682390 chr1:136699040-136699670 chr1:136700290-136702510 chr1:136713150-136714230 chr1:136118370-136119680 chr1:136412470-136413680 chr1:136312560-136318850 chr1:136478450-136481730 chr1:136695700-136699670 chr1:136700290-136704540 chr1:136711090-136718410 chr1:136796730-136798950 chr1:136799080-136800700 chr1:136804320-136812820 chr1:136827950-136830780 chr1:136918040-136918350 chr1:136918420-136920180 chr1:136457110-136464820 chr1:136109600-136110800 chr1:136312560-136313590 chr1:136319830-136320530 chr1:136322670-136324150 chr1:136416020-136418860 chr1:136423120-136424150 chr1:136493610-136494150 chr1:136494260-136495010 chr1:136501220-136502280 chr1:136607670-136608890 chr1:136312560-136313520 chr1:136314730-136317600 chr1:136240310-136241900 chr1:136312560-136312870 chr1:136605140-136606470 chr1:136761820-136762350 chr1:136312560-136317160 chr1:136405640-136407370 chr1:136106560-136108160 chr1:136604000-136607960 chr1:136859360-136859600 chr1:136412290-136414000 chr1:136609170-136611460 chr1:136128930-136130200 chr1:136196180-136196780 chr1:136609240-136611490 chr1:136355240-136355770 chr1:136616240-136616680 chr1:136680490-136682520 chr1:136686860-136688630 chr1:136700290-136701240 chr1:136714440-136716270 chr1:136128910-136130430 chr1:136615800-136617070 chr1:136224020-136224570 chr1:136224660-136224860 chr1:136224940-136225220 chr1:136225380-136225720 chr1:136249010-136251230 chr1:136252290-136257330 chr1:136409650-136412120 chr1:136417190-136419660 chr1:136423150-136424120 chr1:136476960-136481730 chr1:136662650-136664740 chr1:136805170-136812760 chr1:136412210-136413880 chr1:136609180-136612700 chr1:136240630-136241910 chr1:136303240-136303430 chr1:136458510-136462470 chr1:136198980-136200180 chr1:136241280-136241470 chr1:136312560-136313540 chr1:136423460-136424110 chr1:136605800-136606360 chr1:136648540-136652880 chr1:136700290-136702660 chr1:136713630-136716710 chr1:136240540-136241920 chr1:136391380-136392060 chr1:136329960-136331520 chr1:135987400-135997700 chr1:136312560-136312650 chr1:136604730-136606300 chr1:136405610-136407340 chr1:136761440-136762350 chr1:136406660-136407160 chr1:136241120-136241430 chr1:136240300-136241920 chr1:136646090-136659660 chr1:136696290-136699670 chr1:136700290-136701480 chr1:136712980-136713980 chr1:136719610-136721750 chr1:136240620-136241830 chr1:136437060-136437510 chr1:136329920-136330190 chr1:136810000-136810800 chr1:136409910-136410440 chr1:136437040-136437510

Promoter:

chr1:134558177-134562177

 ChIP-seq based regulatory details of Kdm5b
Sample ID Experiment target Biosample term name Cell type Tissue type Source
TcoF_01_21714 Kdm5b R1 Embryonic Stem Cell Embryo Cistrome
TcoF_01_21713 Kdm5b E14 Embryonic Stem Cell Embryo Cistrome
TcoF_01_21712 Kdm5b E14 Embryonic Stem Cell Embryo Cistrome
 Downstream target genes of Kdm5b
 Upstream regulatory details of Kdm5b
 Protein-protein interaction of Kdm5b
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
Kdm5b Morf4l1 Affinity Capture-Western 21448134 10090 10090 BIOGRID
Kdm5b Hdac1 Affinity Capture-Western 21448134 10090 10090 BIOGRID
Kdm5b Sin3a Affinity Capture-Western 21448134 10090 10090 BIOGRID
Kdm5b Maats1 Co-fractionation 32325033 10090 10090 BIOGRID
 Annotation of Kdm5b
 Disease information of Kdm5b