TcoF overview
TcoF: Ldb1
GeneID: 16825
Name: LIM domain-binding protein 1
Ensembl: ENSMUSG00000025223
Species: Mouse
Class: NA
Family: LIM
Disease: --
Go-trem: 43
Pathway: 3
Super Enhancer:

chr19:46050244-46051189 chr19:46029197-46032627 chr19:46029340-46030504 chr19:46028682-46033223 chr19:46024885-46025807 chr19:46050220-46051111 chr19:46049319-46051231 chr19:46042346-46043031 chr19:46049364-46051421 chr19:46041933-46042843 chr19:46029547-46032428

Enhancer:

chr19:45822770-45823030 chr19:45823120-45823230 chr19:46131230-46131550 chr19:46286800-46292220 chr19:46295320-46302830 chr19:46363040-46368350 chr19:46379310-46380180 chr19:46380510-46380770 chr19:46380850-46380970 chr19:46388280-46388660 chr19:46388820-46388950 chr19:46389020-46389100 chr19:46389290-46390520 chr19:46390560-46391420 chr19:46392720-46393960 chr19:46394050-46394140 chr19:46394200-46394740 chr19:46395090-46395250 chr19:46395450-46396540 chr19:46396980-46397610 chr19:46403010-46403160 chr19:46403310-46403570 chr19:46404080-46404300 chr19:46405320-46405400 chr19:46407190-46412800 chr19:46412910-46413050 chr19:46442870-46443720 chr19:46449740-46451300 chr19:46471770-46475420 chr19:46522730-46524310 chr19:46524460-46525060 chr19:46525150-46525380 chr19:46527800-46529220 chr19:46529330-46535400 chr19:46538620-46548060 chr19:46548190-46549990 chr19:46558150-46560340 chr19:46587300-46587590 chr19:46589220-46589540 chr19:46594980-46602330 chr19:46645000-46647520 chr19:46647940-46650080 chr19:46673780-46677680 chr19:46698060-46699830 chr19:46718940-46720570 chr19:46447680-46448930 chr19:46563290-46566130 chr19:45823630-45823920 chr19:46379740-46380180 chr19:46471770-46472010 chr19:46605870-46606470 chr19:46647010-46647520 chr19:46379700-46380180 chr19:46469760-46470110 chr19:46471770-46472070 chr19:45757360-45758640 chr19:45917220-45919730 chr19:45928280-45930640 chr19:46111400-46113540 chr19:46355230-46357520 chr19:46469500-46470110 chr19:46111670-46113540 chr19:45870820-45871580 chr19:46111550-46113540 chr19:45885380-45886680 chr19:45894880-45897530 chr19:46109430-46109910 chr19:46110080-46110220 chr19:46110320-46110410 chr19:46110480-46110590 chr19:46110640-46110750 chr19:46322820-46324470 chr19:46390560-46393960 chr19:46394850-46395010 chr19:46397970-46398400 chr19:46398500-46398760 chr19:46399500-46400650 chr19:46400710-46401570 chr19:46405470-46405540 chr19:46406540-46407100 chr19:46443500-46443720 chr19:46468690-46470110 chr19:46471770-46473820 chr19:46527800-46528140 chr19:46605870-46607690 chr19:45885050-45886680 chr19:45894880-45898030 chr19:46109660-46109910 chr19:46322570-46324990 chr19:46382550-46382660 chr19:46382740-46382830 chr19:46383240-46383350 chr19:46384250-46384330 chr19:46384540-46384690 chr19:46406300-46406400 chr19:46468220-46470110 chr19:46471770-46475260 chr19:46382970-46383110 chr19:46447900-46448930 chr19:46529330-46531770 chr19:46301870-46302350 chr19:46391350-46392290 chr19:46392660-46393440 chr19:46067450-46069280 chr19:45815320-45815980 chr19:45816160-45816400 chr19:45816480-45816810 chr19:45817040-45817140 chr19:45870190-45870760 chr19:45885160-45886680 chr19:46066790-46070180 chr19:46105360-46107090 chr19:46390590-46393960 chr19:46394200-46394570 chr19:46411210-46412800 chr19:45955670-45957700 chr19:46112410-46113540 chr19:46112550-46113540 chr19:46471770-46472190 chr19:45724220-45724960 chr19:45729900-45734260 chr19:46107830-46108520 chr19:46108670-46108870 chr19:46109000-46109100 chr19:46109180-46109310 chr19:46381010-46381260 chr19:46381350-46381430 chr19:46381580-46381850 chr19:46382200-46382440 chr19:46384860-46384980 chr19:46387410-46387790 chr19:46387930-46388140 chr19:46407190-46407900 chr19:46411690-46412800 chr19:46467850-46470110 chr19:46528460-46529220 chr19:46538800-46547090 chr19:46605870-46608870 chr19:46627050-46630300 chr19:46529330-46532740 chr19:45749660-45751830 chr19:46400820-46401570 chr19:46411870-46412800 chr19:46471770-46473370 chr19:46111490-46113540 chr19:46289050-46291740 chr19:46110340-46110410 chr19:45909780-45910580 chr19:45911400-45912570 chr19:45974900-45979370 chr19:46088930-46090000 chr19:46106080-46107090 chr19:46111710-46113540 chr19:46162220-46163190 chr19:45734180-45734260 chr19:45911500-45912660 chr19:46469790-46470110 chr19:45750470-45750680 chr19:45870410-45870720 chr19:45886440-45886680 chr19:45887100-45887460 chr19:46112440-46113540 chr19:46404080-46404190 chr19:46411780-46412800 chr19:46471770-46472320 chr19:45895310-45896260 chr19:45976260-45977700 chr19:46067400-46069360 chr19:46113030-46113540 chr19:46272470-46273810 chr19:46272470-46275600 chr19:46381010-46381220 chr19:46401200-46401570 chr19:46468000-46470110 chr19:46287200-46292600 chr19:45384940-45386460 chr19:45496300-45497040 chr19:45533020-45533750 chr19:45549890-45550960 chr19:45608520-45610910 chr19:45639480-45641620 chr19:45643210-45644900 chr19:45648830-45651410 chr19:45681200-45682810 chr19:45696260-45697330 chr19:45702850-45703980 chr19:45720620-45722150 chr19:45733510-45734260 chr19:45750230-45751660 chr19:45799440-45801040 chr19:45811770-45812600 chr19:45815310-45815980 chr19:45886780-45887560 chr19:45889770-45890220 chr19:46393170-46393870 chr19:46400990-46401570 chr19:46412060-46412800 chr19:46469650-46470110 chr19:46471770-46472080 chr19:46605870-46608600 chr19:46782020-46782240 chr19:46782280-46782550 chr19:46564910-46565650 chr19:46112240-46113540 chr19:46471770-46474780 chr19:46605870-46607970 chr19:46300020-46300740 chr19:46109550-46109910 chr19:46400320-46400650 chr19:46089150-46089700 chr19:46469640-46470110 chr19:46111510-46113540 chr19:46286020-46293150 chr19:46293210-46304320 chr19:45665660-45666210 chr19:45666280-45667220 chr19:45729950-45734260 chr19:45754770-45755690 chr19:45823350-45823540 chr19:46018340-46018640 chr19:46206660-46207510 chr19:46301800-46302420 chr19:46316940-46317220 chr19:46388380-46388660 chr19:46390560-46391220 chr19:46395500-46396510 chr19:46411000-46412800 chr19:46468390-46470110 chr19:46483690-46484460 chr19:46553000-46554200 chr19:46300460-46301530 chr19:46565140-46565600 chr19:46529330-46530610 chr19:46111590-46113540 chr19:46404080-46404250 chr19:46407190-46408160 chr19:46411590-46412800 chr19:46471770-46473590 chr19:46448670-46448930 chr19:45848070-45848150 chr19:45848250-45849360 chr19:45886480-45886680 chr19:45991650-45993450 chr19:46250960-46251920 chr19:46288970-46291200 chr19:46323000-46324670 chr19:46392520-46393960 chr19:46401000-46401570 chr19:46411790-46412800 chr19:46471770-46474430 chr19:46533460-46535330 chr19:46601760-46602330 chr19:46605870-46607320 chr19:45956070-45957520 chr19:46299060-46300920 chr19:46564380-46565630 chr19:46131230-46131510 chr19:46313830-46317420 chr19:45929940-45930520 chr19:46113410-46113540 chr19:45848250-45849470 chr19:45852190-45853070 chr19:45885140-45886680 chr19:46111470-46113540 chr19:46289520-46290560 chr19:45889800-45890220 chr19:46469450-46470110 chr19:46471770-46471890 chr19:45844690-45846170 chr19:45848250-45850530 chr19:45851500-45853070 chr19:45886460-45886680 chr19:45917870-45918490 chr19:46400850-46401570 chr19:46404080-46404140 chr19:46468490-46470110 chr19:46471770-46472000 chr19:45757420-45758940 chr19:46471770-46471980 chr19:45757700-45758570 chr19:46471770-46471850 chr19:45758230-45758610 chr19:45886370-45886680 chr19:45886780-45887350 chr19:45917340-45919090 chr19:45928210-45929720 chr19:46111060-46113540 chr19:46113010-46113540 chr19:45955720-45957810 chr19:45870240-45870760 chr19:45871210-45871580 chr19:46067940-46068820 chr19:46111650-46112300 chr19:46412720-46412800

Promoter:

chr19:46043211-46047211

 ChIP-seq based regulatory details of Ldb1
Sample ID Experiment target Biosample term name Cell type Tissue type Source
TcoF_01_21794 Ldb1 None Embryonic Stem Cell None Cistrome
TcoF_01_21793 Ldb1 None Embryonic Stem Cell None Cistrome
TcoF_01_21792 Ldb1 None None Islets Cistrome
TcoF_01_21791 Ldb1 AtT-20 Corticotroph Pituitary Cistrome
TcoF_01_21790 Ldb1 None Hemangioblast Embryo Cistrome
TcoF_01_21789 Ldb1 None None Bone Marrow Cistrome
TcoF_01_21788 Ldb1 None Haematopoietic Progenitor Cell Bone Marrow Cistrome
 Downstream target genes of Ldb1
 Upstream regulatory details of Ldb1
 Protein-protein interaction of Ldb1
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
Ldb1 Lhx1 Two-hybrid 20211142 10090 10090 BIOGRID
Ldb1 Lhx2 Two-hybrid 20211142 10090 10090 BIOGRID
Ldb1 Lhx4 Two-hybrid 20211142 10090 10090 BIOGRID
Ldb1 Lhx5 Two-hybrid 20211142 10090 10090 BIOGRID
Ldb1 Lhx9 Two-hybrid 20211142 10090 10090 BIOGRID
Ldb1 Lmo2 Two-hybrid 20211142 10090 10090 BIOGRID
Ldb1 Lmo4 Two-hybrid 20211142 10090 10090 BIOGRID
Ldb1 Lmx1b Two-hybrid 20211142 10090 10090 BIOGRID
Ldb1 Ssbp2 Two-hybrid 20211142 10090 10090 BIOGRID
Ldb1 Zfp593 Two-hybrid 20211142 10090 10090 BIOGRID
Ldb1 Pygo1 Two-hybrid 20211142 10090 10090 BIOGRID
Ldb1 Ssbp3 Two-hybrid 20211142 10090 10090 BIOGRID
Ldb1 Ssbp4 Two-hybrid 20211142 10090 10090 BIOGRID
Ldb1 Isl2 Two-hybrid 20211142 10090 10090 BIOGRID
Ldb1 Csdc2 Two-hybrid 20211142 10090 10090 BIOGRID
Ldb1 Lmo3 Two-hybrid 20211142 10090 10090 BIOGRID
Ldb1 Lmo1 Two-hybrid 20211142 10090 10090 BIOGRID
Ldb1 Lmx1a Two-hybrid 20211142 10090 10090 BIOGRID
Ldb1 Tardbp Two-hybrid 20211142 10090 10090 BIOGRID
Ldb1 Tgif2lx1 Two-hybrid 20211142 10090 10090 BIOGRID
Ldb1 Zfp446 Two-hybrid 20211142 10090 10090 BIOGRID
Ldb1 Pitx2 Affinity Capture-Western 12464179 10090 10090 BIOGRID
 Annotation of Ldb1
 Disease information of Ldb1