TcoF overview
| TcoF: | Nipbl | |
| GeneID: | 71175 | |
| Name: | Nipped-B-like protein | |
| Ensembl: | ENSMUSG00000022141 | |
| Species: | Mouse | |
| Class: | NA | |
| Family: | Others | |
| Disease: | -- | |
| Go-trem: | 63 | |
| Pathway: | 1 | |
| Super Enhancer: | chr15:8448581-8449347 chr15:8462220-8463315 chr15:8511698-8512203 chr15:8511176-8522052 chr15:8339894-8341432 chr15:8433055-8434334 chr15:8413277-8413814 chr15:8401511-8402180 chr15:8518102-8520169 chr15:8447191-8449344 chr15:8512906-8513648 chr15:8462991-8463519 chr15:8469062-8473047 chr15:8472517-8473085 chr15:8429554-8430878 chr15:8469042-8469888 chr15:8447140-8447676 chr15:8485029-8485624 chr15:8409857-8414072 chr15:8432056-8434342 chr15:8325238-8326023 chr15:8468116-8470322 chr15:8429592-8430834 chr15:8448797-8449356 chr15:8348146-8348493 chr15:8451413-8451964 chr15:8462293-8465600 chr15:8448520-8452037 chr15:8511520-8512952 chr15:8402314-8417218 chr15:8469111-8469680 chr15:8331399-8332158 chr15:8410989-8411685 chr15:8450890-8451649 chr15:8325457-8332194 chr15:8411171-8411641 chr15:8460908-8461201 chr15:8429259-8430094 chr15:8409784-8413576 chr15:8450870-8463386 chr15:8324524-8332188 chr15:8511707-8512465 |
|
| Enhancer: |
chr15:8049020-8049110 chr15:8119480-8120300 chr15:8144480-8145800 chr15:8227020-8231420 chr15:8387420-8394120 chr15:8412800-8414640 chr15:8586650-8589050 chr15:8593130-8595480 chr15:8602520-8624920 chr15:8625380-8638280 chr15:8638420-8658560 chr15:8658830-8660330 chr15:8734580-8737080 chr15:8754760-8757550 chr15:8682800-8685280 chr15:8746980-8749150 chr15:8765520-8768580 chr15:8048610-8048950 chr15:8631240-8638280 chr15:8638420-8644800 chr15:8645890-8649650 chr15:8755680-8757500 chr15:8747290-8748600 chr15:8393460-8394120 chr15:8468220-8470030 chr15:8119480-8119770 chr15:8391160-8394120 chr15:8461590-8462540 chr15:8048460-8048950 chr15:8229180-8229850 chr15:8390720-8394120 chr15:8048140-8048950 chr15:8391180-8394120 chr15:8048530-8048950 chr15:8119480-8119810 chr15:8229090-8230720 chr15:8392170-8394120 chr15:8391680-8394120 chr15:8119480-8120230 chr15:8392110-8394120 chr15:8531020-8534130 chr15:8780390-8782970 chr15:8119480-8119880 chr15:8229180-8230230 chr15:8391500-8394120 chr15:8630840-8631630 chr15:8617560-8619400 chr15:8048890-8048950 chr15:8393420-8394120 chr15:8390800-8394120 chr15:8461170-8463620 chr15:8048860-8048950 chr15:8391950-8394120 chr15:8646170-8649680 chr15:8392200-8394120 chr15:8391990-8394120 chr15:8119480-8119860 chr15:8393220-8394120 chr15:8119480-8119710 chr15:8393210-8394120 chr15:8393350-8394120 chr15:8391980-8394120 chr15:8390540-8394120 chr15:8275260-8275680 chr15:8275770-8276030 chr15:8391510-8394120 chr15:8405280-8406110 chr15:8613690-8614200 chr15:8391840-8394120 chr15:8647550-8649210 chr15:8048780-8048950 chr15:8229390-8229800 chr15:8393250-8394120 chr15:8393190-8394120 chr15:8391880-8394120 chr15:8565010-8565960 chr15:8617780-8618670 chr15:8393410-8394120 chr15:8119480-8119600 chr15:8660100-8660330 chr15:8393330-8394120 chr15:8391920-8394120 chr15:8764860-8774880 chr15:8393270-8394120 chr15:8390600-8394120 chr15:8119480-8119660 chr15:8393200-8394120 chr15:8660080-8660330 chr15:8393480-8394120 chr15:8048730-8048950 chr15:8392150-8394120 chr15:8393260-8394120 chr15:8119480-8119540 chr15:8392020-8394120 chr15:8613160-8614020 chr15:8710000-8713870 chr15:8392220-8394120 chr15:8392140-8394120 chr15:8588680-8589050 chr15:8383650-8394120 chr15:8603350-8617310 chr15:8625600-8628820 chr15:8629510-8638280 chr15:8638420-8640420 chr15:8734110-8737130 chr15:8751240-8757600 chr15:8617420-8624940 chr15:8764720-8770680 chr15:8119480-8120160 chr15:8229130-8230800 chr15:8274650-8275680 chr15:8275770-8276440 chr15:8281480-8282010 chr15:8389220-8394120 chr15:8405230-8406300 chr15:8410550-8411330 chr15:8461500-8462270 chr15:8531110-8531600 chr15:8611740-8612360 chr15:8710620-8713980 chr15:8392630-8394120 chr15:8048640-8048950 chr15:8119480-8120120 chr15:8392300-8394120 chr15:8048720-8048950 chr15:8119480-8119730 chr15:8606800-8616650 chr15:8706320-8706850 chr15:8711620-8712210 chr15:8764590-8767320 chr15:8509630-8509870 chr15:8119480-8119670 chr15:8409990-8410840 chr15:8412330-8413990 chr15:8461410-8463000 chr15:8215360-8218750 chr15:8048760-8048950 chr15:8393520-8394120 chr15:8390690-8394120 chr15:8393720-8394120 chr15:8036760-8038000 chr15:8048670-8048950 chr15:8119480-8119800 chr15:8392650-8394120 chr15:8414890-8415620 chr15:8119480-8120070 chr15:8461500-8462760 chr15:8047960-8048360 chr15:8461530-8462660 chr15:8506230-8506890 chr15:8229240-8229800 chr15:8647340-8649460 chr15:8393360-8394120 chr15:8615420-8616520 chr15:8631330-8633560 chr15:8638550-8640630 chr15:8658970-8660330 chr15:8048880-8048950 chr15:8647930-8648340 chr15:8660160-8660330 |
|
| Promoter: |
chr15:8442463-8446463 |
ChIP-seq based regulatory details of Nipbl
| Sample ID | Experiment target | Biosample term name | Cell type | Tissue type | Source |
|---|---|---|---|---|---|
| TcoF_01_21939 | Nipbl | None | None | Liver | Cistrome |
| TcoF_01_21938 | Nipbl | None | None | Liver | Cistrome |
| TcoF_01_21937 | Nipbl | None | Embryonic Fibroblast | None | Cistrome |
| TcoF_01_21936 | Nipbl | None | T Lymphocyte | None | Cistrome |
| TcoF_01_21935 | Nipbl | None | Thymocyte | Blood | Cistrome |
| TcoF_01_21934 | Nipbl | V6.5 | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_21933 | Nipbl | V6.5 | Embryonic Stem Cell | Embryo | Cistrome |
Downstream target genes of Nipbl
Protein-protein interaction of Nipbl
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| Nipbl | KPNA6 | Affinity Capture-MS | 20360068 | 10090 | 9606 | BIOGRID |
| Nipbl | KPNA1 | Affinity Capture-MS | 20360068 | 10090 | 9606 | BIOGRID |
| Nipbl | NIPBL | Affinity Capture-MS | 20360068 | 10090 | 9606 | BIOGRID |
| Nipbl | MAML1 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Nipbl | PPP1R13L | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Nipbl | KLC2 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Nipbl | BRAT1 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Nipbl | Cdca8 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Nipbl | Lrif1 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Nipbl | Prr14 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
Annotation of Nipbl
Expression of Nipbl
Disease information of Nipbl