TcoF overview
TcoF: Paf1
GeneID: 54624
Name: RNA polymerase II-associated factor 1 homolog
Ensembl: ENSMUSG00000003437
Species: Mouse
Class: class 1
Family: Others
Disease: --
Go-trem: 25
Pathway: 12
Super Enhancer:

chr7:28400577-28411485 chr7:28387552-28412093 chr7:28386061-28402659

Enhancer:

chr7:28834220-28835000 chr7:28954830-28958520 chr7:28975250-28982700 chr7:29021840-29022840 chr7:29040800-29042890 chr7:29096030-29096940 chr7:29118280-29123370 chr7:29123450-29123710 chr7:29135870-29136010 chr7:29136110-29136550 chr7:29137710-29144620 chr7:29176160-29177460 chr7:29178270-29178680 chr7:29201100-29207550 chr7:29215110-29221150 chr7:29222590-29223050 chr7:29368150-29383050 chr7:29403820-29405120 chr7:29430240-29431600 chr7:29525340-29526500 chr7:29526570-29526780 chr7:29603940-29605170 chr7:29610430-29610890 chr7:29633880-29636580 chr7:29701260-29703690 chr7:29712550-29747030 chr7:29765560-29766690 chr7:29163510-29164190 chr7:29178710-29180060 chr7:29193450-29198680 chr7:29552690-29556820 chr7:29704080-29712300 chr7:28834770-28835000 chr7:28955100-28955320 chr7:29096540-29096940 chr7:29225770-29225950 chr7:29226060-29226450 chr7:29227780-29227980 chr7:29163850-29164190 chr7:28834250-28835000 chr7:28954830-28955960 chr7:28978560-28982560 chr7:28987990-28989120 chr7:29095340-29095880 chr7:29122890-29123370 chr7:29377770-29379460 chr7:29382240-29383050 chr7:29598410-29598870 chr7:29178710-29179300 chr7:28954830-28955420 chr7:29123220-29123370 chr7:29172040-29172120 chr7:29178270-29178360 chr7:29222590-29222870 chr7:29226540-29226680 chr7:29226730-29227530 chr7:29096720-29096940 chr7:29122980-29123370 chr7:29155510-29156130 chr7:29156260-29156650 chr7:29382340-29383050 chr7:29136110-29136420 chr7:29177340-29177460 chr7:29225860-29225950 chr7:28954830-28955870 chr7:29096380-29096940 chr7:29122660-29123370 chr7:29136650-29137190 chr7:29138820-29140790 chr7:29176490-29177460 chr7:29219580-29221150 chr7:29225000-29225950 chr7:29226730-29228230 chr7:29229950-29230930 chr7:29231000-29231160 chr7:29382680-29383050 chr7:28954830-28956460 chr7:29452120-29453080 chr7:29575760-29577250 chr7:29605290-29605560 chr7:29768070-29768230 chr7:29768290-29768400 chr7:29768490-29769100 chr7:29342270-29343830 chr7:29605760-29606230 chr7:29769160-29769840 chr7:29121900-29123370 chr7:29225060-29225950 chr7:28954830-28957390 chr7:29096190-29096940 chr7:29122760-29123370 chr7:29137710-29143550 chr7:29177200-29177460 chr7:29225150-29225950 chr7:29382270-29383050 chr7:28833990-28834120 chr7:28954830-28957240 chr7:28962810-28963220 chr7:28993620-28994530 chr7:29083750-29083910 chr7:29121860-29123370 chr7:29136650-29136810 chr7:29176220-29177460 chr7:29219280-29221150 chr7:29222590-29223220 chr7:29230540-29230930 chr7:29231000-29231390 chr7:29237060-29237250 chr7:29237350-29239510 chr7:29248730-29251600 chr7:29252560-29253900 chr7:29344820-29345160 chr7:29345290-29345810 chr7:29346000-29347550 chr7:29347680-29347960 chr7:29348100-29349220 chr7:29349660-29349830 chr7:29350290-29353050 chr7:29354880-29359080 chr7:29379930-29383050 chr7:29477990-29478160 chr7:29478660-29479740 chr7:29479860-29480020 chr7:29502050-29502960 chr7:29525640-29526500 chr7:29178710-29179290 chr7:29342320-29343830 chr7:29555350-29556820 chr7:28966690-28967370 chr7:28954830-28956220 chr7:28962740-28963220 chr7:28993460-28994540 chr7:29074500-29075340 chr7:29078940-29079050 chr7:29079940-29080820 chr7:29086580-29086700 chr7:29091040-29091440 chr7:29091540-29091840 chr7:29093610-29095090 chr7:29095110-29095310 chr7:29122720-29123370 chr7:29136650-29137080 chr7:29176610-29177460 chr7:29219940-29221150 chr7:29222590-29222970 chr7:29237350-29239320 chr7:29248530-29251600 chr7:29252560-29254170 chr7:29354880-29365350 chr7:29376520-29383050 chr7:29502050-29503040 chr7:29525790-29526500 chr7:29552690-29553480 chr7:29557220-29559910 chr7:29567910-29570390 chr7:29582260-29582570 chr7:29596180-29597840 chr7:29611090-29611200 chr7:29178710-29179080 chr7:29556700-29556820 chr7:29122620-29123370 chr7:29137710-29141600 chr7:29156430-29156650 chr7:29249440-29250260 chr7:28834730-28835000 chr7:28954830-28955400 chr7:29177130-29177460 chr7:29178270-29178580 chr7:29225250-29225950 chr7:29227670-29228230 chr7:29163760-29164190 chr7:29213990-29221150 chr7:29225120-29225950 chr7:29354880-29383050 chr7:29178710-29179210 chr7:28954830-28956100 chr7:28993500-28995030 chr7:29073740-29075340 chr7:29096640-29096940 chr7:29122940-29123370 chr7:29141010-29144470 chr7:29203000-29203780 chr7:29249010-29251600 chr7:29252560-29253240 chr7:29354880-29358780 chr7:29360100-29365660 chr7:29376010-29379330 chr7:29096220-29096940 chr7:29123060-29123370 chr7:29163790-29164190 chr7:29163870-29164190 chr7:28797550-28799030 chr7:28834480-28835000 chr7:28954830-28959520 chr7:29073860-29075340 chr7:29079940-29080650 chr7:29120480-29123370 chr7:29137710-29139960 chr7:29140130-29144200 chr7:29178270-29178630 chr7:29218440-29221150 chr7:29222590-29223380 chr7:29248820-29250880 chr7:29252560-29253380 chr7:29329570-29330250 chr7:29330350-29331170 chr7:29331220-29331300 chr7:29331370-29331760 chr7:29354880-29366190 chr7:29375070-29383050 chr7:29440380-29442680 chr7:29525250-29526500 chr7:29596180-29598290 chr7:28833610-28833810 chr7:28954830-28955750 chr7:28962290-28963220 chr7:29073620-29075340 chr7:29079940-29080520 chr7:29095600-29095880 chr7:29137290-29137380 chr7:29137420-29137510 chr7:29137760-29143810 chr7:29154820-29155070 chr7:29155180-29155250 chr7:29176780-29177460 chr7:29252560-29253450 chr7:29380040-29383050 chr7:29178710-29179030 chr7:29381430-29382680 chr7:28954830-28955620 chr7:29122840-29123370 chr7:29141790-29142820 chr7:29155790-29156130 chr7:29252560-29252750 chr7:29123100-29123370 chr7:29163540-29164190 chr7:28797580-28799030 chr7:28831800-28832000 chr7:28832090-28832190 chr7:28832300-28832380 chr7:28832530-28833810 chr7:28959700-28959800 chr7:28959910-28960000 chr7:28960090-28960870 chr7:28962830-28963220 chr7:28969540-28970080 chr7:28992890-28994950 chr7:29093430-29095090 chr7:29121790-29123370 chr7:29153900-29155070 chr7:29214120-29221150 chr7:29222590-29224630 chr7:29346990-29347550 chr7:29549240-29551260 chr7:29551880-29552650 chr7:29556870-29557110 chr7:29579420-29579840 chr7:29579910-29579990 chr7:29580060-29580670 chr7:29580820-29580900 chr7:29582740-29582820 chr7:29583980-29585770 chr7:29599110-29599220 chr7:29603550-29603660 chr7:29606290-29606410 chr7:29606500-29606860 chr7:29649500-29649840 chr7:29649930-29650550 chr7:29655140-29656670 chr7:29666970-29667560 chr7:29670910-29671380 chr7:29671460-29671550 chr7:29671630-29671710 chr7:29671790-29672590 chr7:29674850-29675170 chr7:29675240-29675340 chr7:29675400-29675920 chr7:29676000-29677630 chr7:29677750-29677840 chr7:29677900-29677980 chr7:29679670-29680450 chr7:29680530-29681100 chr7:29681250-29681890 chr7:29682070-29682860 chr7:29683000-29683080 chr7:29683270-29683350 chr7:29694730-29696500 chr7:29698470-29700230 chr7:29700310-29701170 chr7:29703810-29703970 chr7:29704080-29718380 chr7:29718580-29727330 chr7:29729750-29747030 chr7:29765230-29765460 chr7:29928620-29930150 chr7:29065140-29067280 chr7:29178710-29179350 chr7:29769160-29769680 chr7:28797680-28799030 chr7:28833470-28833810 chr7:28954830-28959210 chr7:28993500-28994550 chr7:29121870-29123370 chr7:29137710-29139600 chr7:29172040-29172240 chr7:29220220-29221150 chr7:29222590-29223130 chr7:29357660-29371250 chr7:29380500-29383050 chr7:29525320-29526500 chr7:29552690-29553240 chr7:29580480-29580670 chr7:29136110-29136220 chr7:29227520-29228230 chr7:29136650-29137180 chr7:29141550-29144450 chr7:29154890-29155070 chr7:29122800-29123370 chr7:29141220-29144460 chr7:29220090-29221150 chr7:29361390-29366160 chr7:29379890-29383050 chr7:29178710-29179250 chr7:28954830-28956050 chr7:28981360-28982400 chr7:28993700-28994630 chr7:29141720-29144160 chr7:29176920-29177460 chr7:29201510-29204770 chr7:29218980-29221150 chr7:29225660-29225950 chr7:29227650-29228230 chr7:29252560-29253610 chr7:29371650-29372990 chr7:29377580-29379220 chr7:29382300-29383050 chr7:29502050-29502350 chr7:29526070-29526500 chr7:29552690-29553720 chr7:29580520-29580670 chr7:29584950-29585900 chr7:29616300-29616400 chr7:29616470-29616730 chr7:29616880-29617020 chr7:29650340-29650550 chr7:29684770-29686890 chr7:29735360-29742800 chr7:29742820-29747030 chr7:29766090-29766690 chr7:29194670-29198440 chr7:29704080-29712470 chr7:29123270-29123370 chr7:29220720-29221150 chr7:29354590-29354810 chr7:29079940-29080160 chr7:29094860-29095090 chr7:29122810-29123370 chr7:29141920-29143270 chr7:29381900-29383050 chr7:28967490-28967590 chr7:29119290-29123370 chr7:29172040-29173650 chr7:29218870-29221150 chr7:29222590-29223500 chr7:29439890-29442820 chr7:28954830-28955930 chr7:29107330-29107480 chr7:29107580-29108740 chr7:29122990-29123370 chr7:29136650-29137130 chr7:29141670-29143510 chr7:29155560-29156130 chr7:29249350-29251050 chr7:29315420-29315900 chr7:29354420-29354810 chr7:29360890-29365750 chr7:29371630-29373860 chr7:29379990-29383050 chr7:29526030-29526500 chr7:29612180-29612830 chr7:29633980-29636310 chr7:29685750-29686890 chr7:29696050-29696500 chr7:29696590-29697250 chr7:29697340-29698390 chr7:29698470-29699230 chr7:29720900-29723020 chr7:29729720-29732150 chr7:29735420-29738350 chr7:29766140-29766690 chr7:29343380-29343830 chr7:29621680-29622630 chr7:28713350-28714310 chr7:28856270-28856590 chr7:28954830-28956200 chr7:29122600-29123370 chr7:29176800-29177460 chr7:29217400-29221150 chr7:29222590-29223600 chr7:29326320-29327090 chr7:29352400-29353050 chr7:29526000-29526500 chr7:29611290-29614810 chr7:29626320-29626500 chr7:29632550-29637000 chr7:29650750-29651090 chr7:29704080-29747030 chr7:29178710-29178950 chr7:28713460-28714310 chr7:28798590-28799030 chr7:28954830-28955560 chr7:29123080-29123370 chr7:29141680-29143350 chr7:29237350-29237670 chr7:29252560-29253200 chr7:29371730-29373500 chr7:29377470-29380060 chr7:29381300-29383050 chr7:29450040-29451110 chr7:29574020-29575340 chr7:29596180-29596520 chr7:29634180-29636120 chr7:29651300-29651710 chr7:29714110-29715670 chr7:29729700-29735190 chr7:29735520-29739390 chr7:29746370-29747030 chr7:28954830-28956330 chr7:29096680-29096940 chr7:29123020-29123370 chr7:29177220-29177460 chr7:29361280-29363100 chr7:29371380-29373840 chr7:29525980-29526500 chr7:29685690-29686890 chr7:29728530-29733190 chr7:29733270-29735110 chr7:29735430-29739380 chr7:29746540-29747030 chr7:29765930-29766690 chr7:29704080-29706470 chr7:28954830-28957490 chr7:29154620-29155070 chr7:29214870-29219660 chr7:29222590-29223060 chr7:29354880-29371230 chr7:29374900-29382940 chr7:29704080-29710910 chr7:29769160-29769360 chr7:28954830-28955520 chr7:29095810-29095880 chr7:29122690-29123370 chr7:29137290-29137360 chr7:29141730-29143870 chr7:29154590-29155070 chr7:29354880-29357450 chr7:29359310-29371370 chr7:29371400-29373910 chr7:29377160-29379360 chr7:29380740-29383050 chr7:28966690-28966840 chr7:29141800-29143750 chr7:29155870-29156130 chr7:29203070-29203730 chr7:29225070-29225950 chr7:29227640-29228230 chr7:29354880-29364130 chr7:29368440-29374170 chr7:29377760-29383050 chr7:29195350-29196500 chr7:29141370-29144560 chr7:29220070-29221150 chr7:29354880-29359040 chr7:29359320-29364210 chr7:29366860-29374220 chr7:29377770-29379160 chr7:29380840-29383050 chr7:29195440-29196470 chr7:29172040-29172220 chr7:29220860-29221150 chr7:29360120-29365500 chr7:28713880-28714310 chr7:28798230-28799030 chr7:28975700-28977370 chr7:28993450-28994970 chr7:29096130-29096940 chr7:29110340-29110960 chr7:29123000-29123370 chr7:29215120-29220670 chr7:29247610-29248160 chr7:29249790-29250220 chr7:29381710-29383050 chr7:29655520-29656670 chr7:29740850-29746070 chr7:29746780-29747030 chr7:29766110-29766690 chr7:29928640-29929470 chr7:29163710-29164190 chr7:29178270-29178480 chr7:29220580-29221150 chr7:29225300-29225950 chr7:28954830-28957060 chr7:29079940-29080200 chr7:29155780-29156130 chr7:29176600-29177460 chr7:29219130-29221150 chr7:29248790-29251010 chr7:29178710-29179710 chr7:29225020-29225950 chr7:28834530-28835000 chr7:28954830-28957230 chr7:29079940-29080020 chr7:29094760-29095090 chr7:29122350-29123370 chr7:29141660-29144500 chr7:29177120-29177460 chr7:29203130-29204570 chr7:29354980-29356220 chr7:29361430-29364020 chr7:29371600-29373830 chr7:29378190-29383050 chr7:29604280-29605170 chr7:28966690-28966860 chr7:29326320-29326430 chr7:29355200-29355870 chr7:29380520-29381280 chr7:29359510-29383050 chr7:29096530-29096940 chr7:29176880-29177460 chr7:29378450-29379200 chr7:29381880-29383050 chr7:29122860-29123370 chr7:29141690-29143930 chr7:29155760-29156130 chr7:29361320-29362980 chr7:29380520-29383050 chr7:28977060-28977410 chr7:29107580-29107960 chr7:29350290-29351380 chr7:29361370-29365180 chr7:29377810-29379170 chr7:29377580-29379690 chr7:29095380-29095880 chr7:29117910-29123370 chr7:29137710-29137790 chr7:29172040-29172270 chr7:29202920-29205340 chr7:29215000-29221070 chr7:29225230-29225950 chr7:29227550-29228230 chr7:29352420-29353050 chr7:29455720-29457300 chr7:29096410-29096940 chr7:29122960-29123370 chr7:29136110-29136530 chr7:29156410-29156650 chr7:29177070-29177460 chr7:29178270-29178650 chr7:29220670-29221150 chr7:29382770-29383050 chr7:28954830-28956850 chr7:28962960-28963220 chr7:29073510-29075340 chr7:29079940-29081300 chr7:29095450-29095880 chr7:29122130-29123370 chr7:29222590-29224690 chr7:29178710-29179260 chr7:28994010-28994480 chr7:29096760-29096940 chr7:29178270-29178560 chr7:29225240-29225950 chr7:29141460-29143250 chr7:29380890-29383050 chr7:28954830-28955270 chr7:29096810-29096940 chr7:29123190-29123370 chr7:29382960-29383050 chr7:28954830-28955450 chr7:28993890-28994470 chr7:29075210-29075340 chr7:29079940-29080140 chr7:29123120-29123370 chr7:29136110-29136430 chr7:29219610-29221150 chr7:29380850-29383050 chr7:29450170-29451170 chr7:29478660-29479300 chr7:29526220-29526500 chr7:29231000-29231240 chr7:29382900-29383050 chr7:28954830-28956720 chr7:29096750-29096940 chr7:29123040-29123370 chr7:29178270-29178450 chr7:29227540-29228230 chr7:29140150-29140800 chr7:29223720-29224540 chr7:29225830-29225950 chr7:29226730-29227490 chr7:28954830-28955550 chr7:28993760-28994210 chr7:29096320-29096940 chr7:29156340-29156650 chr7:29220610-29221150 chr7:29225780-29225950 chr7:29226730-29227460 chr7:29382740-29383050 chr7:28834590-28835000 chr7:29141750-29144400 chr7:29155830-29156130 chr7:29177110-29177460 chr7:29222590-29222920 chr7:29382910-29383050 chr7:29178710-29178830 chr7:29196090-29196770 chr7:29343360-29343830 chr7:29360890-29365880 chr7:29375130-29383050 chr7:29440580-29441830 chr7:29462130-29463110 chr7:29479140-29479740 chr7:28954830-28955540 chr7:29095500-29095880 chr7:29123250-29123370 chr7:29136110-29136480 chr7:29155640-29156130 chr7:29222590-29222840 chr7:29225700-29225950 chr7:29226060-29226400 chr7:29227690-29228190 chr7:29382690-29383050 chr7:29650440-29650550 chr7:29696190-29696500 chr7:29698470-29699130 chr7:29768070-29768140 chr7:29178710-29179170 chr7:29195360-29197130 chr7:29704080-29705360 chr7:28954830-28955360 chr7:28993760-28994480 chr7:29138080-29139660 chr7:29142880-29143500 chr7:29172040-29172190 chr7:29203160-29203680 chr7:29225730-29225950 chr7:29249870-29250330 chr7:29252560-29253070 chr7:29330040-29330250 chr7:29330350-29330520 chr7:29362820-29364240 chr7:29381130-29383050 chr7:29462720-29463010 chr7:29479560-29479740 chr7:29596180-29596740

Promoter:

chr7:28390995-28394995

 ChIP-seq based regulatory details of Paf1
Sample ID Experiment target Biosample term name Cell type Tissue type Source
TcoF_01_30043 Paf1 C2C12 Muscle Skeletal Muscle ChIP_Atlas
TcoF_01_30042 Paf1 C2C12 Muscle Skeletal Muscle ChIP_Atlas
TcoF_01_20490 Paf1 KH2 Embryonic Stem Cell Embryo Cistrome
TcoF_01_20489 Paf1 KH2 Embryonic Stem Cell Embryo Cistrome
TcoF_01_20488 Paf1 KH2 Embryonic Stem Cell Embryo Cistrome
TcoF_01_20487 Paf1 KH2 Embryonic Stem Cell Embryo Cistrome
TcoF_01_20486 Paf1 KH2 Embryonic Stem Cell Embryo Cistrome
TcoF_01_20485 Paf1 KH2 Embryonic Stem Cell Embryo Cistrome
 Downstream target genes of Paf1
 Upstream regulatory details of Paf1
 Protein-protein interaction of Paf1
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
Paf1 Leo1 Affinity Capture-Western 25933433 10090 10090 BIOGRID
Paf1 CTR9 Affinity Capture-Western 25933433 10090 9606 BIOGRID
Paf1 Supt16 Co-fractionation 32325033 10090 10090 BIOGRID
 Annotation of Paf1
 Disease information of Paf1