TcoF overview
| TcoF: | Pdlim1 | |
| GeneID: | 54132 | |
| Name: | PDZ and LIM domain protein 1 | |
| Ensembl: | ENSMUSG00000055044 | |
| Species: | Mouse | |
| Class: | NA | |
| Family: | Others | |
| Disease: | -- | |
| Go-trem: | 21 | |
| Pathway: | -- | |
| Super Enhancer: | chr19:40257085-40267873 chr19:40235295-40258805 chr19:40278332-40278981 chr19:40296827-40308464 chr19:40289979-40306702 chr19:40240287-40254344 chr19:40297617-40305103 chr19:40230310-40258534 chr19:40275294-40277132 chr19:40240396-40241989 chr19:40230771-40231671 chr19:40275433-40276543 chr19:40240596-40242031 chr19:40300203-40300963 chr19:40293508-40332397 chr19:40240288-40254524 chr19:40277706-40279260 chr19:40240847-40242033 chr19:40231417-40247659 chr19:40289994-40308530 chr19:40296137-40308716 chr19:40246511-40279211 chr19:40225644-40227130 chr19:40266528-40269141 chr19:40240824-40241631 chr19:40299862-40301144 chr19:40240707-40241711 chr19:40240442-40241792 chr19:40323083-40324252 chr19:40231457-40276526 chr19:40296267-40308861 chr19:40256287-40276160 chr19:40239643-40241461 chr19:40307345-40308031 chr19:40314193-40314935 chr19:40238983-40241577 chr19:40297065-40298193 chr19:40256087-40267951 chr19:40240452-40242025 chr19:40275690-40281088 chr19:40253623-40254172 chr19:40225473-40225698 chr19:40302729-40307994 chr19:40241234-40247695 chr19:40278319-40278838 chr19:40296807-40298192 chr19:40247282-40249822 chr19:40297322-40298142 chr19:40267475-40267832 chr19:40266993-40269231 chr19:40247064-40249905 chr19:40237990-40238788 |
|
| Enhancer: |
chr19:40314080-40316720 chr19:40327260-40332780 chr19:40359880-40366520 chr19:40371910-40372890 chr19:40526960-40574860 chr19:40581890-40585280 chr19:40586160-40587340 chr19:40315700-40315990 chr19:40329870-40333740 chr19:40341340-40343800 chr19:40330370-40333000 chr19:40330210-40333150 chr19:40341600-40343640 chr19:40551620-40552520 chr19:40544540-40548700 chr19:40550990-40554300 chr19:40534300-40549020 chr19:40551020-40556200 chr19:40331580-40332370 chr19:40573360-40574230 chr19:40341640-40342580 chr19:40587030-40587340 chr19:40314060-40316960 chr19:40327800-40329700 chr19:40321080-40322230 chr19:40327680-40329660 chr19:40561190-40568240 chr19:40314040-40316890 chr19:40327350-40329850 chr19:40362650-40363690 chr19:40405390-40407070 chr19:40416900-40418840 chr19:40541150-40556350 chr19:40560490-40574860 chr19:40696170-40696500 chr19:40710640-40713990 chr19:40321000-40322550 chr19:40315390-40315860 chr19:40538710-40539480 chr19:40327020-40345830 chr19:40550530-40553490 chr19:40319600-40324100 chr19:40324190-40326390 chr19:40326550-40345830 chr19:40549200-40555800 chr19:40558600-40560600 chr19:40572400-40574860 chr19:40415650-40415830 chr19:40315410-40316320 chr19:40561180-40562830 chr19:40323000-40324100 chr19:40324190-40326060 chr19:40327940-40329300 chr19:40330160-40333120 chr19:40341520-40344790 chr19:40546000-40547120 chr19:40560920-40568900 chr19:40568960-40571100 chr19:40321030-40322890 chr19:40328150-40328600 chr19:40332020-40332340 chr19:40341780-40342850 chr19:40562950-40564870 chr19:40586310-40586840 chr19:40712040-40713100 chr19:40532950-40534430 chr19:40312410-40317360 chr19:40327020-40336990 chr19:40341780-40345830 chr19:40535280-40545430 chr19:40549560-40556130 chr19:40560100-40564920 chr19:40582200-40585280 chr19:40374010-40375840 chr19:40315020-40316200 chr19:40561240-40562990 chr19:40340400-40343770 chr19:40331470-40333370 chr19:40340550-40345830 chr19:40710600-40716520 chr19:40721460-40722980 chr19:40321390-40322500 chr19:40327610-40329030 chr19:40341610-40342390 chr19:40569730-40571550 chr19:40297650-40297870 chr19:40323770-40324100 chr19:40326550-40327510 chr19:40340330-40345830 chr19:40331540-40332830 chr19:40341340-40342300 chr19:40315430-40316640 chr19:40328410-40329580 chr19:40330410-40331260 chr19:40342550-40343700 chr19:40340380-40344800 chr19:40331630-40333060 chr19:40340960-40343720 chr19:40330460-40332900 chr19:40341590-40342410 chr19:40362810-40366520 chr19:40376200-40378620 chr19:40415240-40415830 chr19:40545590-40547480 chr19:40551490-40553340 chr19:40560920-40564080 chr19:40581890-40582520 chr19:40315310-40315550 chr19:40328280-40328770 chr19:40586190-40586830 |
|
| Promoter: |
chr19:40269616-40273616 |
ChIP-seq based regulatory details of Pdlim1
| Sample ID | Experiment target | Biosample term name | Cell type | Tissue type | Source |
|---|
Downstream target genes of Pdlim1
Protein-protein interaction of Pdlim1
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| Pdlim1 | Actn4 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Pdlim1 | Ctnnb1 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Pdlim1 | Gfap | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Pdlim1 | Nubp1 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Pdlim1 | Vim | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
Annotation of Pdlim1
Expression of Pdlim1
Disease information of Pdlim1