TcoF overview
| TcoF: | Per2 | |
| GeneID: | 18627 | |
| Name: | period circadian clock 2 | |
| Ensembl: | ENSMUSG00000055866 | |
| Species: | Mouse | |
| Class: | class HC | |
| Family: | Others | |
| Disease: | 1 | |
| Go-trem: | 43 | |
| Pathway: | 3 | |
| Super Enhancer: | chr1:91435883-91438730 chr1:91455698-91456819 chr1:91434791-91447420 chr1:91435428-91457124 chr1:91421903-91456639 chr1:91435388-91437670 chr1:91441760-91452720 chr1:91435590-91437357 chr1:91445579-91449891 chr1:91465175-91465719 chr1:91435254-91437130 chr1:91455422-91456685 chr1:91435703-91466391 chr1:91435268-91465895 chr1:91442993-91456437 chr1:91435379-91447299 chr1:91463306-91465865 chr1:91435158-91449676 chr1:91464339-91466374 chr1:91453268-91454702 chr1:91455783-91456937 chr1:91435757-91436743 chr1:91435307-91446792 chr1:91436035-91455079 chr1:91435102-91466573 chr1:91436026-91437308 chr1:91455696-91456803 chr1:91435784-91437215 chr1:91464924-91465802 chr1:91435629-91437199 chr1:91455784-91457148 chr1:91455482-91456709 chr1:91436036-91437327 chr1:91435891-91449129 chr1:91436048-91456956 chr1:91453920-91454393 chr1:91435744-91449412 chr1:91453749-91454512 chr1:91436173-91437008 |
|
| Enhancer: |
chr1:93111520-93117480 chr1:93167300-93171720 chr1:93195020-93197100 chr1:93197210-93199340 chr1:93288020-93295220 chr1:93309050-93309290 chr1:93309370-93309460 chr1:93309550-93309630 chr1:93327950-93329380 chr1:93334980-93336460 chr1:93341360-93342070 chr1:93348080-93355740 chr1:93437750-93440720 chr1:93587500-93595980 chr1:93337460-93340020 chr1:93132060-93132280 chr1:93147010-93147430 chr1:93195020-93195260 chr1:93195020-93196990 chr1:93318130-93320260 chr1:93327710-93329380 chr1:93329460-93329970 chr1:93330090-93331190 chr1:93331300-93331590 chr1:93331740-93332220 chr1:93336600-93337400 chr1:93347420-93355740 chr1:93337460-93341160 chr1:93354820-93355740 chr1:93655240-93655990 chr1:93656630-93657330 chr1:93147010-93147510 chr1:93195020-93195870 chr1:93173580-93174830 chr1:93197210-93197800 chr1:93511380-93513880 chr1:93520360-93530390 chr1:93546320-93547580 chr1:93575110-93576390 chr1:93309110-93309290 chr1:93263220-93264940 chr1:93301750-93302070 chr1:93302190-93302480 chr1:93330760-93331190 chr1:93352820-93355740 chr1:93101900-93102970 chr1:93219000-93220050 chr1:93519410-93524040 chr1:93602730-93607020 chr1:93117040-93117340 chr1:93208840-93212060 chr1:93355410-93355740 chr1:93355100-93355740 chr1:93110600-93117450 chr1:93207620-93208340 chr1:93195020-93195710 chr1:93215280-93215610 chr1:93215690-93216650 chr1:93219000-93219460 chr1:93265050-93265940 chr1:93267100-93267200 chr1:93654800-93656090 chr1:93255550-93255910 chr1:93266050-93266660 chr1:93266910-93266990 chr1:93267290-93267950 chr1:93268030-93268950 chr1:93270790-93272400 chr1:93272650-93272890 chr1:93275160-93276180 chr1:93281930-93283790 chr1:93283910-93284920 chr1:93287240-93287700 chr1:93287770-93295220 chr1:93314590-93315490 chr1:93345430-93346380 chr1:93346450-93347180 chr1:93272970-93275040 chr1:93456160-93460410 chr1:93247710-93248510 chr1:93346450-93346800 chr1:93247710-93248590 chr1:93719560-93721700 chr1:93331480-93331590 chr1:93354210-93355740 chr1:93005280-93006930 chr1:93112590-93116630 chr1:93247710-93248450 chr1:93346450-93346810 chr1:93351230-93355740 chr1:93720020-93720440 chr1:93263220-93263630 chr1:93443800-93444450 chr1:93644240-93644540 chr1:93339430-93340260 chr1:93197640-93199340 chr1:93199440-93200360 chr1:93205390-93206370 chr1:93206480-93207640 chr1:93212370-93213640 chr1:93213720-93214160 chr1:93214260-93215610 chr1:93215690-93215890 chr1:93330910-93331190 chr1:93349800-93355740 chr1:93426490-93427140 chr1:93514660-93515800 chr1:93338090-93341160 chr1:93103360-93106000 chr1:93268030-93268400 chr1:93286000-93287180 chr1:93287770-93290000 chr1:93456160-93456800 chr1:93076710-93079800 chr1:93337800-93341160 chr1:93314590-93314800 chr1:93263220-93264110 chr1:93354830-93355740 chr1:93461040-93462060 chr1:93492840-93493820 chr1:93506700-93512210 chr1:93514450-93516400 chr1:93581470-93582240 chr1:93582350-93583650 chr1:93625270-93630110 chr1:93644130-93644860 chr1:93653250-93654370 chr1:93655070-93656170 chr1:93656490-93657970 chr1:93501620-93503220 chr1:93665920-93667810 chr1:93354380-93355740 chr1:93505670-93512670 chr1:93514540-93516680 chr1:93526300-93528380 chr1:93528560-93530380 chr1:93604580-93605560 chr1:93610800-93613060 chr1:93628950-93630040 chr1:93653230-93654460 chr1:93655030-93656100 chr1:93656560-93657940 chr1:93501690-93503920 chr1:93666680-93667830 chr1:93195020-93195220 chr1:93354720-93355740 chr1:93440580-93440720 chr1:93440870-93443500 chr1:93443800-93444830 chr1:93272970-93273300 chr1:93195020-93195290 chr1:93611500-93612820 chr1:93656560-93657550 chr1:93719910-93720480 chr1:93350370-93355740 chr1:93379040-93380190 chr1:93338210-93340520 chr1:93128520-93129210 chr1:93263270-93263850 chr1:93350400-93355740 chr1:93379010-93379390 chr1:93338990-93341160 chr1:93167080-93171400 chr1:93247710-93250180 chr1:93334980-93335240 chr1:93351310-93355740 chr1:93627580-93630020 chr1:93208830-93211880 chr1:93123580-93126830 chr1:93131090-93133200 chr1:93136390-93136890 chr1:93174050-93174510 chr1:93195020-93196530 chr1:93219000-93219810 chr1:93440870-93442690 chr1:93463460-93464390 chr1:93076710-93077120 chr1:93195020-93195840 chr1:93351860-93355740 chr1:93351270-93355740 chr1:93076710-93077020 chr1:93195020-93197060 chr1:93147010-93148330 chr1:93195020-93195310 chr1:93354240-93355740 chr1:93041740-93044340 chr1:93195020-93196420 chr1:93546800-93547560 chr1:93617030-93617640 chr1:93147010-93147820 chr1:93345430-93346310 chr1:93339230-93339940 chr1:93195020-93195190 chr1:93355380-93355740 chr1:93195020-93195320 chr1:93723140-93725320 chr1:93617000-93618220 chr1:93334980-93336170 chr1:93516900-93518330 chr1:93523310-93524570 chr1:93528520-93530450 chr1:93546320-93547550 chr1:93547750-93549320 chr1:93560350-93561790 chr1:93575240-93575590 chr1:93195020-93195890 chr1:93122700-93125330 chr1:93147010-93147160 chr1:93195020-93195200 chr1:93263860-93264940 chr1:93268030-93268880 chr1:93548720-93549890 chr1:93593580-93594200 chr1:93698720-93698810 chr1:93719270-93721610 chr1:93735920-93737600 chr1:93740660-93743330 chr1:93753280-93756050 chr1:93775060-93776040 chr1:93799440-93801230 chr1:93666340-93668530 chr1:93331840-93332220 chr1:93334980-93335120 chr1:93351600-93355740 |
|
| Promoter: |
chr1:91457328-91461328 |
ChIP-seq based regulatory details of Per2
| Sample ID | Experiment target | Biosample term name | Cell type | Tissue type | Source |
|---|---|---|---|---|---|
| TcoF_01_20141 | Per2 | None | Epithelium | Liver | Cistrome |
| TcoF_01_20140 | Per2 | None | Epithelium | Liver | Cistrome |
| TcoF_01_20133 | Per2 | None | Epithelium | Liver | Cistrome |
| TcoF_01_20132 | Per2 | None | Epithelium | Liver | Cistrome |
| TcoF_01_20131 | Per2 | None | Epithelium | Liver | Cistrome |
| TcoF_01_20130 | Per2 | None | Epithelium | Liver | Cistrome |
| TcoF_01_20126 | Per2 | None | Epithelium | Liver | Cistrome |
Downstream target genes of Per2
Protein-protein interaction of Per2
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| Per2 | Clock | Affinity Capture-Western | 14701732 | 10090 | 10090 | BIOGRID |
| Per2 | Per1 | Affinity Capture-Western | 14701732 | 10090 | 10090 | BIOGRID |
| Per2 | Per3 | Affinity Capture-Western | 14701732 | 10090 | 10090 | BIOGRID |
| Per2 | Cry1 | Affinity Capture-Western | 14701732 | 10090 | 10090 | BIOGRID |
| Per2 | Cry2 | Affinity Capture-Western | 14701732 | 10090 | 10090 | BIOGRID |
| Per2 | Per2 | Two-hybrid | 20211142 | 10090 | 10090 | BIOGRID |
| Per2 | Gtf2a1 | Two-hybrid | 20211142 | 10090 | 10090 | BIOGRID |
| Per2 | Foxp1 | Two-hybrid | 20211142 | 10090 | 10090 | BIOGRID |
| Per2 | Med16 | Two-hybrid | 20211142 | 10090 | 10090 | BIOGRID |
| Per2 | Sfpq | Affinity Capture-Western | 21680841 | 10090 | 10090 | BIOGRID |
| Per2 | Sin3a | Affinity Capture-Western | 21680841 | 10090 | 10090 | BIOGRID |
| Per2 | Clock | Affinity Capture-Western | 21680841 | 10090 | 10090 | BIOGRID |
| Per2 | Arntl | Affinity Capture-Western | 21680841 | 10090 | 10090 | BIOGRID |
| Per2 | Cry1 | Affinity Capture-Western | 21680841 | 10090 | 10090 | BIOGRID |
| Per2 | Csnk1e | Affinity Capture-Western | 21680841 | 10090 | 10090 | BIOGRID |
| Per2 | Clock | Affinity Capture-MS | 21680841 | 10090 | 10090 | BIOGRID |
| Per2 | Arntl | Affinity Capture-MS | 21680841 | 10090 | 10090 | BIOGRID |
| Per2 | Cry1 | Affinity Capture-MS | 21680841 | 10090 | 10090 | BIOGRID |
| Per2 | Csnk1e | Affinity Capture-MS | 21680841 | 10090 | 10090 | BIOGRID |
| Per2 | Csnk1d | Affinity Capture-MS | 21680841 | 10090 | 10090 | BIOGRID |
| Per2 | Nono | Affinity Capture-MS | 21680841 | 10090 | 10090 | BIOGRID |
| Per2 | Sfpq | Affinity Capture-MS | 21680841 | 10090 | 10090 | BIOGRID |
| Per2 | Btrc | Affinity Capture-Western | 15767683 | 10090 | 10090 | BIOGRID |
| Per2 | Csnk1e | Affinity Capture-Western | 15767683 | 10090 | 10090 | BIOGRID |
| Per2 | Cry1 | Affinity Capture-Western | 25127877 | 10090 | 10090 | BIOGRID |
| Per2 | Cry2 | Co-crystal Structure | 25127877 | 10090 | 10090 | BIOGRID |
| Per2 | Usp2 | Affinity Capture-Western | 23213472 | 10090 | 10090 | BIOGRID |
| Per2 | PML | Affinity Capture-Western | 22274616 | 10090 | 9606 | BIOGRID |
| Per2 | Pml | Affinity Capture-Western | 22274616 | 10090 | 10090 | BIOGRID |
| Per2 | Clock | Affinity Capture-Western | 22274616 | 10090 | 10090 | BIOGRID |
| Per2 | Arntl | Affinity Capture-Western | 22274616 | 10090 | 10090 | BIOGRID |
| Per2 | Cdk5 | Reconstituted Complex | 31687929 | 10090 | 10090 | BIOGRID |
| Per2 | Hlf | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Per2 | Per3 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Per2 | Timeless | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Per2 | Per2 | Affinity Capture-Western | 26903623 | 10090 | 10090 | BIOGRID |
| Per2 | Cry2 | Affinity Capture-Western | 26903623 | 10090 | 10090 | BIOGRID |
| Per2 | Arntl | Affinity Capture-Western | 26903623 | 10090 | 10090 | BIOGRID |
| Per2 | Nr1d1 | Affinity Capture-Western | 26903623 | 10090 | 10090 | BIOGRID |
Annotation of Per2
Expression of Per2
Disease information of Per2