TcoF overview
TcoF: Rad21
GeneID: 19357
Name: Double-strand-break repair protein rad21 homolog
Ensembl: ENSMUSG00000022314
Species: Mouse
Class: class 2
Family: Others
Disease: --
Go-trem: 22
Pathway: 24
Super Enhancer:

chr15:51950063-51953129 chr15:51982900-51986319 chr15:51980104-51985956 chr15:51957765-51958806 chr15:51977686-51978408 chr15:51951634-51952547 chr15:51987543-52020343 chr15:51957822-51959316 chr15:51951554-51952565 chr15:51987268-51988020 chr15:51951596-51952461 chr15:51982798-51986157 chr15:51940792-51942261 chr15:51985172-51986840 chr15:51977723-51978827 chr15:51950983-51978858 chr15:51999662-52002633 chr15:51949526-51951041 chr15:51951559-51952303 chr15:52005532-52011231 chr15:51983546-51984302

Enhancer:

chr15:51074580-51081420 chr15:51194310-51195920 chr15:51358120-51359880 chr15:51400600-51409080 chr15:51512850-51514620 chr15:51560200-51564700 chr15:51632250-51639900 chr15:51663920-51671490 chr15:51684900-51696870 chr15:51811850-51814070 chr15:51814240-51823090 chr15:51592650-51594720 chr15:51641850-51646450 chr15:51696020-51696870 chr15:51696710-51696870 chr15:51466360-51467070 chr15:51541920-51542110 chr15:51696360-51696870 chr15:51654550-51655080 chr15:51695880-51696870 chr15:51695940-51696870 chr15:51696100-51696870 chr15:51695990-51696870 chr15:51604890-51608080 chr15:51696160-51696870 chr15:51872070-51873270 chr15:51629540-51630730 chr15:51636000-51637490 chr15:51696040-51696870 chr15:51696560-51696870 chr15:51782320-51784240 chr15:51683320-51687530 chr15:51694480-51696870 chr15:51783160-51784890 chr15:51872070-51872410 chr15:51696290-51696870 chr15:51872070-51873280 chr15:51696470-51696870 chr15:51604460-51608360 chr15:51626440-51627930 chr15:51628080-51629150 chr15:51629250-51630730 chr15:51630900-51632670 chr15:51696280-51696870 chr15:51628870-51629150 chr15:51630900-51631730 chr15:51648710-51671490 chr15:51690020-51696870 chr15:51659750-51661010 chr15:51694530-51696870 chr15:51665550-51666060 chr15:51685050-51687110 chr15:51696080-51696870 chr15:51696590-51696870 chr15:51540920-51543320 chr15:51561600-51563420 chr15:51606240-51607940 chr15:51685160-51687520 chr15:51730630-51731130 chr15:51696670-51696870 chr15:51809720-51814070 chr15:51696120-51696870 chr15:51772700-51773280 chr15:51783080-51783830 chr15:51815010-51815980 chr15:51696000-51696870 chr15:51552000-51553180 chr15:51630900-51631120 chr15:51783110-51783870 chr15:51483480-51484440 chr15:51552030-51553260 chr15:51577810-51578680 chr15:51606160-51608180 chr15:51629570-51630730 chr15:51667400-51668300 chr15:51685430-51687570 chr15:51696580-51696870 chr15:51660060-51660830 chr15:51630900-51631080 chr15:51685070-51686340 chr15:51696150-51696870 chr15:51540590-51545040 chr15:51630900-51639780 chr15:51694220-51696870 chr15:51815020-51823090 chr15:51504410-51506480 chr15:51520850-51521500 chr15:51637850-51639470 chr15:51654610-51655510 chr15:51659400-51661430 chr15:51695900-51696870 chr15:51896780-51897170 chr15:52066830-52068750 chr15:51696350-51696870 chr15:51695890-51696870 chr15:51872070-51872570 chr15:51653640-51655290 chr15:51540470-51543330 chr15:51696460-51696870 chr15:51642050-51643770 chr15:51696390-51696870 chr15:51783260-51784680 chr15:51694560-51696870 chr15:51812700-51814070 chr15:51814240-51818370 chr15:51641010-51643760 chr15:51696490-51696870 chr15:51695700-51696870 chr15:51696700-51696870 chr15:51685190-51687280 chr15:51696130-51696870 chr15:51696640-51696870 chr15:51872070-51873510 chr15:51654060-51655700 chr15:51659580-51660270 chr15:51653820-51655560 chr15:51659720-51660130 chr15:51696410-51696870 chr15:51627170-51627810 chr15:51696790-51696870

Promoter:

chr15:51989760-51993760

 ChIP-seq based regulatory details of Rad21
Sample ID Experiment target Biosample term name Cell type Tissue type Source
TcoF_01_30267 Rad21 Embryonic limb Embryo None ChIP_Atlas
TcoF_01_30266 Rad21 Embryonic limb Embryo None ChIP_Atlas
TcoF_01_30265 Rad21 Embryonic limb Embryo None ChIP_Atlas
TcoF_01_30231 Rad21 Olfactory Nerve Neural None ChIP_Atlas
TcoF_01_30230 Rad21 Olfactory Nerve Neural None ChIP_Atlas
TcoF_01_30228 Rad21 B-Lymphocytes None Blood ChIP_Atlas
TcoF_01_30227 Rad21 B-Lymphocytes None Blood ChIP_Atlas
TcoF_01_30226 Rad21 B-Lymphocytes None Blood ChIP_Atlas
TcoF_01_30225 Rad21 B-Lymphocytes None Blood ChIP_Atlas
TcoF_01_30224 Rad21 B-Lymphocytes None Blood ChIP_Atlas
TcoF_01_30185 Rad21 Macrophages None Blood ChIP_Atlas
TcoF_01_30184 Rad21 Macrophages None Blood ChIP_Atlas
TcoF_01_30183 Rad21 Macrophages None Blood ChIP_Atlas
TcoF_01_30182 Rad21 Macrophages None Blood ChIP_Atlas
TcoF_01_30181 Rad21 Macrophages None Blood ChIP_Atlas
TcoF_01_30180 Rad21 Macrophages None Blood ChIP_Atlas
TcoF_01_30154 Rad21 None None Liver ChIP_Atlas
TcoF_01_30153 Rad21 None None Liver ChIP_Atlas
TcoF_01_30152 Rad21 None None Liver ChIP_Atlas
TcoF_01_30151 Rad21 None None Liver ChIP_Atlas
TcoF_01_30144 Rad21 None None Liver ChIP_Atlas
TcoF_01_30143 Rad21 None None Liver ChIP_Atlas
TcoF_01_30142 Rad21 None None Liver ChIP_Atlas
TcoF_01_30141 Rad21 Embryonic Stem Cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_30140 Rad21 Embryonic Stem Cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_30135 Rad21 mESC derived neural cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_30134 Rad21 mESC derived neural cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_30133 Rad21 mESC derived neural cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_30132 Rad21 mESC derived neural cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_30105 Rad21 CH12 None Blood ChIP_Atlas
TcoF_01_30104 Rad21 CH12 None Blood ChIP_Atlas
TcoF_01_30103 Rad21 CH12 None Blood ChIP_Atlas
TcoF_01_30102 Rad21 CH12 None Blood ChIP_Atlas
TcoF_01_30101 Rad21 CH12 None Blood ChIP_Atlas
TcoF_01_30100 Rad21 CH12 None Blood ChIP_Atlas
TcoF_01_30099 Rad21 CH12 None Blood ChIP_Atlas
TcoF_01_30098 Rad21 CH12 None Blood ChIP_Atlas
TcoF_01_30097 Rad21 CH12 None Blood ChIP_Atlas
TcoF_01_30096 Rad21 None T Lymphocyte Blood ChIP_Atlas
TcoF_01_30095 Rad21 None T Lymphocyte Blood ChIP_Atlas
TcoF_01_30094 Rad21 None T Lymphocyte Blood ChIP_Atlas
TcoF_01_30093 Rad21 None T Lymphocyte Blood ChIP_Atlas
TcoF_01_30073 Rad21 Embryonic Stem Cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_30072 Rad21 Embryonic Stem Cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_30071 Rad21 Embryonic Stem Cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_30070 Rad21 Embryonic Stem Cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_30069 Rad21 Embryonic Stem Cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_30068 Rad21 Embryonic Stem Cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_30067 Rad21 Embryonic Stem Cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_30066 Rad21 Embryonic Stem Cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_30059 Rad21 Macrophages None Blood ChIP_Atlas
TcoF_01_30058 Rad21 Embryonic Stem Cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_30005 Rad21 Embryonic Stem Cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_30004 Rad21 Embryonic Stem Cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_30003 Rad21 mESC derived neural cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_30002 Rad21 mESC derived neural cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_20790 Rad21 AML12 None AML12 cells Cistrome
TcoF_01_20789 Rad21 AML12 None AML12 cells Cistrome
TcoF_01_20788 Rad21 AML12 None AML12 cells Cistrome
TcoF_01_20770 Rad21 None Embryonic Stem Cell None Cistrome
TcoF_01_20767 Rad21 CD-1 None Forelimb Cistrome
TcoF_01_20766 Rad21 None Macrophage Bone Marrow Cistrome
TcoF_01_20765 Rad21 HPC-7 Progenitor Cells None Cistrome
TcoF_01_20760 Rad21 None Macrophage Bone Marrow Cistrome
TcoF_01_20759 Rad21 None Embryonic Stem Cell None Cistrome
TcoF_01_20754 Rad21 None resting Spleen Cistrome
TcoF_01_20753 Rad21 None resting Spleen Cistrome
TcoF_01_20752 Rad21 SCLC-24H B Lymphocyte Spleen Cistrome
TcoF_01_20751 Rad21 SCLC-24H B Lymphocyte Spleen Cistrome
TcoF_01_20744 Rad21 None Embryonic Stem Cell None Cistrome
TcoF_01_20739 Rad21 None Embryonic Stem Cell None Cistrome
TcoF_01_20737 Rad21 None Embryonic Stem Cell None Cistrome
TcoF_01_20730 Rad21 None Embryonic Stem Cell None Cistrome
TcoF_01_20729 Rad21 None Embryonic Stem Cell None Cistrome
TcoF_01_20728 Rad21 None Embryonic Stem Cell None Cistrome
TcoF_01_20727 Rad21 None Embryonic Stem Cell None Cistrome
TcoF_01_20726 Rad21 None Embryonic Stem Cell None Cistrome
TcoF_01_20723 Rad21 None None Forelimb Cistrome
TcoF_01_20722 Rad21 None None Forelimb Cistrome
TcoF_01_20714 Rad21 None None Liver Cistrome
TcoF_01_20713 Rad21 None None Liver Cistrome
TcoF_01_20712 Rad21 None T Lymphocyte None Cistrome
TcoF_01_20711 Rad21 None B Lymphocyte Spleen Cistrome
TcoF_01_20710 Rad21 None resting Spleen Cistrome
TcoF_01_20709 Rad21 None resting Spleen Cistrome
TcoF_01_20708 Rad21 None B Lymphocyte None Cistrome
TcoF_01_20707 Rad21 None Embryonic Fibroblast None Cistrome
TcoF_01_20706 Rad21 None resting None Cistrome
TcoF_01_20699 Rad21 None Macrophage Bone Marrow Cistrome
TcoF_01_20698 Rad21 HPC-7 Progenitor Cells None Cistrome
TcoF_01_20697 Rad21 HPC-7 Progenitor Cells None Cistrome
TcoF_01_20696 Rad21 HPC-7 Progenitor Cells None Cistrome
TcoF_01_20695 Rad21 None Macrophage Bone Marrow Cistrome
TcoF_01_20693 Rad21 None Embryonic Stem Cell None Cistrome
TcoF_01_20691 Rad21 None Embryonic Stem Cell None Cistrome
TcoF_01_20683 Rad21 None Embryonic Stem Cell None Cistrome
TcoF_01_20679 Rad21 None resting Spleen Cistrome
TcoF_01_20674 Rad21 None Embryonic Stem Cell None Cistrome
TcoF_01_20670 Rad21 None Embryonic Stem Cell None Cistrome
TcoF_01_20668 Rad21 None Embryonic Stem Cell None Cistrome
TcoF_01_20667 Rad21 None Embryonic Stem Cell None Cistrome
TcoF_01_20651 Rad21 None Macrophage Bone Marrow Cistrome
TcoF_01_20650 Rad21 None Embryonic Stem Cell None Cistrome
TcoF_01_20649 Rad21 None Erythroid Cell Spleen Cistrome
TcoF_01_20648 Rad21 None Erythroid Cell Spleen Cistrome
TcoF_01_20631 Rad21 JM8.N4 Embryonic Stem Cell None Cistrome
TcoF_01_20630 Rad21 JM8.N4 Embryonic Stem Cell None Cistrome
TcoF_01_20613 Rad21 None Embryonic Fibroblast None Cistrome
TcoF_01_20612 Rad21 None Embryonic Fibroblast None Cistrome
TcoF_01_20611 Rad21 None Embryonic Fibroblast None Cistrome
TcoF_01_20610 Rad21 None Embryonic Fibroblast None Cistrome
TcoF_01_20609 Rad21 None Embryonic Fibroblast None Cistrome
TcoF_01_20608 Rad21 None Embryonic Fibroblast None Cistrome
TcoF_01_20607 Rad21 None Embryonic Fibroblast None Cistrome
TcoF_01_20606 Rad21 None Embryonic Fibroblast None Cistrome
TcoF_01_20605 Rad21 None Embryonic Fibroblast None Cistrome
TcoF_01_20604 Rad21 None Embryonic Fibroblast None Cistrome
TcoF_01_20603 Rad21 None Embryonic Fibroblast None Cistrome
TcoF_01_20602 Rad21 None Embryonic Fibroblast None Cistrome
TcoF_01_20601 Rad21 None Embryonic Fibroblast None Cistrome
TcoF_01_20600 Rad21 None Embryonic Fibroblast None Cistrome
TcoF_01_20599 Rad21 None Embryonic Fibroblast None Cistrome
TcoF_01_20598 Rad21 None Embryonic Fibroblast None Cistrome
TcoF_01_20597 Rad21 None Embryonic Fibroblast None Cistrome
TcoF_01_20596 Rad21 None Embryonic Fibroblast None Cistrome
TcoF_01_20595 Rad21 None Embryonic Fibroblast None Cistrome
TcoF_01_20594 Rad21 None Embryonic Fibroblast None Cistrome
TcoF_01_20593 Rad21 None Embryonic Fibroblast None Cistrome
TcoF_01_20592 Rad21 None Embryonic Fibroblast None Cistrome
TcoF_01_20591 Rad21 None Embryonic Fibroblast None Cistrome
TcoF_01_20590 Rad21 None Embryonic Fibroblast None Cistrome
TcoF_01_20589 Rad21 None Embryonic Fibroblast None Cistrome
TcoF_01_20588 Rad21 None Embryonic Fibroblast None Cistrome
TcoF_01_20586 Rad21 None Progenitor Cells Bone Marrow Cistrome
TcoF_01_20585 Rad21 None Progenitor Cells Bone Marrow Cistrome
TcoF_01_20553 Rad21 None Neutrophil cell None Cistrome
TcoF_01_20552 Rad21 None Myeloid Progenitor Cell None Cistrome
TcoF_01_20551 Rad21 None None Forelimb Cistrome
TcoF_01_20550 Rad21 None None Forelimb Cistrome
TcoF_01_20549 Rad21 None None Forelimb Cistrome
TcoF_01_20548 Rad21 None None Forelimb Cistrome
TcoF_01_20547 Rad21 None None Forelimb Cistrome
TcoF_01_20546 Rad21 None None Forelimb Cistrome
TcoF_01_20545 Rad21 None None Hindlimb Cistrome
TcoF_01_20544 Rad21 None None Hindlimb Cistrome
TcoF_01_20543 Rad21 None None Hindlimb Cistrome
TcoF_01_20542 Rad21 None None Hindlimb Cistrome
TcoF_01_20541 Rad21 None None Hindlimb Cistrome
TcoF_01_20540 Rad21 None None Hindlimb Cistrome
TcoF_01_20539 Rad21 None None Midbrain Cistrome
TcoF_01_20538 Rad21 None None Midbrain Cistrome
TcoF_01_20349 Rad21 None Fibroblast None Cistrome
TcoF_01_20348 Rad21 None Fibroblast None Cistrome
TcoF_01_20347 Rad21 None Fibroblast None Cistrome
TcoF_01_20346 Rad21 None Fibroblast None Cistrome
TcoF_01_20345 Rad21 None Fibroblast None Cistrome
TcoF_01_20344 Rad21 None Fibroblast None Cistrome
TcoF_01_20288 Rad21 None None Spleen Cistrome
TcoF_01_20287 Rad21 None None Spleen Cistrome
TcoF_01_20286 Rad21 None None Spleen Cistrome
TcoF_01_20285 Rad21 None None Spleen Cistrome
TcoF_01_20284 Rad21 None None Spleen Cistrome
TcoF_01_20283 Rad21 None None Spleen Cistrome
TcoF_01_20282 Rad21 None None Spleen Cistrome
TcoF_01_20281 Rad21 None None Spleen Cistrome
TcoF_01_20280 Rad21 None None Spleen Cistrome
TcoF_01_20278 Rad21 None None Small Intestine Cistrome
TcoF_01_20277 Rad21 None None Intestinal Crypt Cistrome
TcoF_01_20223 Rad21 MEL Erythroid Progenitor Cell None Cistrome
TcoF_01_20222 Rad21 MEL Erythroid Progenitor Cell None Cistrome
TcoF_01_20218 Rad21 CH12 Lymphoblastoid Blood Cistrome
TcoF_01_20188 Rad21 None Astrocyte None Cistrome
TcoF_01_20187 Rad21 None Neural Stem Cell None Cistrome
TcoF_01_20172 Rad21 None None Brain Cistrome
TcoF_01_20171 Rad21 None None Brain Cistrome
TcoF_01_20157 Rad21 V6.5 Embryonic Stem Cell Embryo Cistrome
TcoF_01_20156 Rad21 V6.5 Embryonic Stem Cell Embryo Cistrome
TcoF_01_20118 Rad21 None Pre-B Lymphocyte None Cistrome
TcoF_01_20117 Rad21 None Pre-B Lymphocyte None Cistrome
TcoF_01_20113 Rad21 None Pre-B Lymphocyte None Cistrome
TcoF_01_20104 Rad21 None Thymocyte Blood Cistrome
TcoF_01_20033 Rad21 None Embryonic Stem Cell Embryo Cistrome
TcoF_01_20032 Rad21 None Embryonic Stem Cell Embryo Cistrome
TcoF_01_20031 Rad21 None B Lymphocyte Bone Marrow Cistrome
TcoF_01_20030 Rad21 None Lymphocyte Blood Cistrome
TcoF_01_10008 Rad21 MEL cell line None None ENCODE
TcoF_01_10007 Rad21 MEL cell line None None ENCODE
TcoF_01_10006 Rad21 CH12.LX None None ENCODE
 Downstream target genes of Rad21
 Upstream regulatory details of Rad21
 Protein-protein interaction of Rad21
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
Rad21 SMC1A Affinity Capture-MS 20360068 10090 9606 BIOGRID
Rad21 STAG2 Affinity Capture-MS 20360068 10090 9606 BIOGRID
Rad21 SMC3 Affinity Capture-MS 20360068 10090 9606 BIOGRID
Rad21 WAPAL Affinity Capture-MS 20360068 10090 9606 BIOGRID
Rad21 PDS5A Affinity Capture-MS 20360068 10090 9606 BIOGRID
Rad21 STAG1 Affinity Capture-MS 20360068 10090 9606 BIOGRID
Rad21 RAD21 Affinity Capture-MS 20360068 10090 9606 BIOGRID
Rad21 PDS5B Affinity Capture-MS 20360068 10090 9606 BIOGRID
Rad21 Nanog Co-localization 21589869 10090 10090 BIOGRID
Rad21 Sox2 Co-localization 21589869 10090 10090 BIOGRID
Rad21 Pou5f1 Co-localization 21589869 10090 10090 BIOGRID
Rad21 Klf4 Co-localization 21589869 10090 10090 BIOGRID
Rad21 Esrrb Co-localization 21589869 10090 10090 BIOGRID
Rad21 SMC1A Affinity Capture-MS 26496610 10090 9606 BIOGRID
Rad21 SMC3 Affinity Capture-MS 26496610 10090 9606 BIOGRID
Rad21 STAG2 Affinity Capture-MS 26496610 10090 9606 BIOGRID
Rad21 PDS5B Affinity Capture-MS 26496610 10090 9606 BIOGRID
Rad21 WAPAL Affinity Capture-MS 26496610 10090 9606 BIOGRID
Rad21 PDS5A Affinity Capture-MS 26496610 10090 9606 BIOGRID
Rad21 AURKAIP1 Affinity Capture-MS 26496610 10090 9606 BIOGRID
Rad21 ZNF768 Affinity Capture-MS 26496610 10090 9606 BIOGRID
Rad21 CDCA5 Affinity Capture-MS 26496610 10090 9606 BIOGRID
Rad21 STAG1 Affinity Capture-MS 26496610 10090 9606 BIOGRID
 Annotation of Rad21
 Disease information of Rad21