TcoF overview
| TcoF: | Rb1 | |
| GeneID: | 19645 | |
| Name: | Retinoblastoma-associated protein | |
| Ensembl: | ENSMUSG00000022105 | |
| Species: | Mouse | |
| Class: | NA | |
| Family: | Other_Co-activator/repressors | |
| Disease: | -- | |
| Go-trem: | 73 | |
| Pathway: | 12 | |
| Super Enhancer: | chr14:73253359-73255865 chr14:73312748-73314288 chr14:73252493-73255997 chr14:73307938-73308713 chr14:73293393-73294520 chr14:73252292-73256652 chr14:73313074-73314272 chr14:73254315-73254878 chr14:73252477-73255998 chr14:73252062-73254969 chr14:73252246-73254895 chr14:73252550-73258908 chr14:73300017-73308735 chr14:73252289-73253155 chr14:73252511-73254816 chr14:73252292-73255829 chr14:73254314-73255849 chr14:73253340-73254843 chr14:73253321-73259069 chr14:73311717-73314384 chr14:73278838-73280175 chr14:73253348-73254758 chr14:73313382-73313786 chr14:73249902-73254059 chr14:73262046-73262851 |
|
| Enhancer: |
chr14:73509700-73511780 chr14:73542400-73542590 chr14:73542990-73546500 chr14:73570000-73573520 chr14:73574320-73576800 chr14:73607250-73611410 chr14:73611550-73612280 chr14:73616580-73619750 chr14:73630150-73636380 chr14:73640160-73642180 chr14:73693310-73694230 chr14:73722420-73725320 chr14:73768230-73784810 chr14:73807750-73816550 chr14:73840680-73846350 chr14:73848780-73854000 chr14:73909990-73910960 chr14:73925120-73925950 chr14:73952700-73955100 chr14:73578370-73582260 chr14:73528650-73532310 chr14:73505220-73505510 chr14:73516780-73517120 chr14:73542990-73543610 chr14:73909990-73910160 chr14:73952700-73953000 chr14:73542990-73544440 chr14:73561900-73562130 chr14:73562280-73563460 chr14:73569700-73573520 chr14:73573720-73574190 chr14:73575410-73576800 chr14:73607360-73611410 chr14:73611550-73612790 chr14:73616580-73618370 chr14:73640160-73643520 chr14:73651290-73655720 chr14:73655780-73659420 chr14:73746610-73750850 chr14:73772940-73776080 chr14:73578370-73581460 chr14:73529390-73532310 chr14:73542440-73542590 chr14:73542990-73544160 chr14:73724540-73725320 chr14:73909990-73910080 chr14:73952700-73953060 chr14:73542990-73544030 chr14:73725210-73725320 chr14:73825340-73826240 chr14:73869160-73869610 chr14:73542990-73544130 chr14:73516720-73517120 chr14:73542430-73542590 chr14:73542990-73543900 chr14:73724400-73725320 chr14:73486400-73488490 chr14:73509800-73513530 chr14:73513860-73520670 chr14:73542990-73546110 chr14:73653240-73653950 chr14:73655110-73655640 chr14:73723550-73725320 chr14:73748260-73751920 chr14:73807870-73808530 chr14:73542990-73545660 chr14:73574480-73576510 chr14:73724560-73725320 chr14:73807300-73808860 chr14:73870260-73870930 chr14:74008530-74009370 chr14:73513830-73521540 chr14:73542990-73547260 chr14:73640160-73641010 chr14:73724410-73725320 chr14:73542990-73544700 chr14:73569610-73573520 chr14:73574320-73575570 chr14:73616580-73618040 chr14:73724050-73725320 chr14:73795070-73796370 chr14:73817950-73831700 chr14:73866520-73869900 chr14:73909990-73910880 chr14:73925120-73925960 chr14:73952700-73953750 chr14:73542990-73544780 chr14:73571560-73573520 chr14:73818440-73827820 chr14:73505040-73505720 chr14:73509990-73511070 chr14:73518830-73520430 chr14:73542990-73544650 chr14:73563240-73563840 chr14:73573410-73573520 chr14:73573720-73573860 chr14:73575410-73575880 chr14:73622270-73622680 chr14:73711950-73714110 chr14:73724030-73725320 chr14:73739380-73740530 chr14:73815040-73815580 chr14:73824490-73826250 chr14:73833180-73834860 chr14:73835210-73836530 chr14:73843790-73847230 chr14:73531380-73532220 chr14:73542990-73544090 chr14:73621820-73622940 chr14:73724310-73724800 chr14:73833040-73833670 chr14:73542990-73543670 chr14:73725090-73725320 chr14:73952700-73952940 chr14:73542990-73545260 chr14:73568900-73573520 chr14:73576940-73578230 chr14:73621780-73625880 chr14:73832650-73837310 chr14:73776390-73784810 chr14:73721950-73723200 chr14:73723860-73725320 chr14:73925120-73925280 chr14:73586030-73587410 chr14:73587660-73589270 chr14:73630630-73631880 chr14:73724330-73725320 chr14:73542990-73544300 chr14:73586690-73587910 chr14:73909990-73910760 chr14:73925120-73925540 chr14:73952700-73953300 chr14:73652710-73654050 chr14:73542990-73544590 chr14:73542990-73545180 chr14:73657340-73658870 chr14:73542990-73544000 chr14:73542990-73545200 chr14:73710470-73717720 chr14:73721950-73725320 chr14:73768230-73772640 chr14:73925120-73926020 chr14:73952700-73954780 chr14:73578370-73579340 chr14:73504630-73508680 chr14:73514890-73526130 chr14:73542990-73545040 chr14:73562280-73563870 chr14:73574340-73576800 chr14:73692290-73694710 chr14:73720090-73721820 chr14:73739080-73739980 chr14:73578370-73580130 chr14:73694830-73696710 chr14:73487030-73487900 chr14:73504940-73505570 chr14:73518440-73520740 chr14:73562280-73562640 chr14:73571600-73573420 chr14:73575670-73576480 chr14:73621890-73623290 chr14:73841580-73842470 chr14:73542990-73544170 chr14:73640160-73640240 chr14:73725020-73725320 chr14:73542990-73544340 chr14:73572380-73572810 chr14:73609000-73610080 chr14:73630260-73632160 chr14:73651520-73655700 chr14:73657530-73658530 chr14:73724220-73725320 chr14:73739080-73740300 chr14:73746680-73749640 chr14:73768230-73776170 chr14:73925120-73925800 chr14:73952700-73953800 chr14:74031040-74033790 chr14:73578370-73582250 chr14:73776310-73784810 chr14:73841540-73842180 chr14:73923890-73924860 chr14:73713180-73713610 chr14:73770620-73771630 chr14:73845270-73846110 chr14:73815170-73815730 chr14:73542990-73544220 chr14:73725030-73725320 chr14:73952700-73953230 chr14:73583860-73589730 chr14:73629800-73637690 chr14:73640160-73643780 chr14:73542990-73544390 chr14:73577620-73578230 chr14:73724360-73725320 chr14:73746930-73747680 chr14:73748110-73749500 chr14:73749880-73752180 chr14:73768230-73772540 chr14:73772790-73774780 chr14:73821320-73822900 chr14:73824680-73826180 chr14:73844460-73847650 chr14:73852530-73853500 chr14:73578370-73580780 chr14:73776460-73777450 chr14:73841540-73842690 chr14:73515000-73520040 chr14:73542990-73544800 chr14:73640160-73648800 chr14:73649000-73657800 chr14:73768230-73778200 chr14:73795070-73795600 chr14:73844400-73854200 chr14:73952700-73954000 chr14:73694830-73696800 chr14:73542990-73543890 chr14:73542990-73544540 chr14:73630830-73631910 chr14:73724990-73725320 chr14:73814590-73816220 chr14:73823090-73824300 chr14:73952700-73953650 chr14:73542990-73544280 chr14:73724770-73725320 chr14:73815020-73815860 chr14:73860220-73861060 chr14:73872120-73872880 chr14:73909990-73910270 chr14:73722060-73723680 chr14:73723820-73725320 chr14:73542990-73544310 chr14:73572100-73572660 chr14:73652480-73653980 chr14:73768830-73771810 chr14:73773900-73774580 chr14:73849700-73850640 chr14:73880300-73882720 chr14:73882890-73884880 chr14:73925120-73925460 chr14:73924220-73924860 chr14:73516710-73517300 chr14:73542990-73544040 chr14:73609060-73609880 chr14:73653230-73654060 chr14:73773860-73774780 chr14:73849440-73850500 chr14:73870590-73871080 chr14:73952700-73953560 chr14:73580400-73580800 chr14:73413040-73415400 chr14:73515940-73518290 chr14:73542990-73545360 chr14:73723620-73725320 chr14:73807960-73812080 chr14:73843730-73848310 chr14:73848870-73854510 chr14:73925120-73925860 chr14:73952700-73953100 chr14:73505040-73505840 chr14:73562780-73563810 chr14:73574010-73574190 chr14:73575390-73576800 chr14:73577470-73578230 chr14:73574580-73576800 chr14:73720000-73721820 chr14:73739520-73740030 chr14:73769110-73772420 chr14:73952700-73953690 chr14:73542990-73543950 chr14:73571610-73573520 chr14:73542990-73544060 chr14:73486670-73488620 chr14:73511780-73528710 chr14:73542990-73545080 chr14:73739340-73740190 chr14:73807850-73808720 chr14:73413430-73414390 chr14:73505100-73505940 chr14:73516680-73517170 chr14:73651870-73654570 chr14:73724350-73725320 chr14:73909990-73910460 chr14:73952700-73953280 chr14:74032130-74033180 chr14:73725160-73725320 chr14:73514600-73525090 chr14:73518880-73520630 chr14:73542990-73544140 chr14:73567930-73573520 chr14:73609010-73609830 chr14:73621750-73623400 chr14:73723780-73725320 chr14:73833010-73835480 chr14:73844250-73846820 chr14:73909990-73910490 chr14:73925120-73925440 chr14:73952700-73953540 chr14:73579880-73581680 chr14:73833220-73833660 chr14:73542990-73545100 chr14:73651540-73655810 chr14:73746230-73748010 chr14:73768230-73783710 chr14:73844380-73848730 chr14:73848900-73853810 chr14:73952700-73954940 chr14:73542990-73544020 chr14:73542990-73546430 chr14:73739460-73739630 chr14:73952700-73952830 chr14:73924400-73924860 chr14:73542990-73544530 chr14:73653360-73654590 chr14:73655180-73655660 chr14:73770570-73771800 chr14:73909990-73910120 chr14:73925120-73925200 chr14:73952700-73952920 chr14:73542990-73545520 chr14:73725040-73725320 chr14:73952700-73953900 chr14:73414880-73415400 chr14:73542990-73548230 chr14:73560140-73561740 chr14:73562280-73564400 chr14:73569290-73570710 chr14:73738580-73740520 chr14:73746760-73751880 chr14:73815560-73817130 chr14:73833100-73834920 chr14:73414910-73415400 chr14:73487010-73489080 chr14:73511950-73513120 chr14:73515830-73520580 chr14:73561160-73561740 chr14:73562280-73563740 chr14:73739260-73740360 chr14:73415190-73415400 chr14:73487600-73488150 chr14:73504910-73505850 chr14:73506300-73507670 chr14:73511790-73512990 chr14:73514750-73520710 chr14:73561140-73561740 chr14:73575640-73576560 chr14:73653270-73653610 chr14:73655220-73655680 chr14:73725120-73725320 chr14:73807700-73808580 chr14:73833280-73833790 chr14:73836240-73836680 chr14:73517420-73518260 chr14:73518350-73519760 chr14:73542990-73544010 chr14:73724480-73725320 chr14:73909990-73910370 chr14:73768230-73773100 chr14:73776150-73779430 chr14:73586830-73588150 chr14:73631200-73631770 chr14:73653050-73653990 chr14:73571820-73573090 chr14:73608840-73609880 chr14:73616410-73616470 chr14:73616580-73617550 chr14:73640160-73643540 chr14:73651930-73654480 chr14:73657660-73658900 chr14:73723920-73725320 chr14:73909990-73910170 chr14:73952700-73953050 chr14:73578830-73579980 chr14:73529890-73532310 chr14:73542990-73543510 |
|
| Promoter: |
chr14:73323791-73327791 |
ChIP-seq based regulatory details of Rb1
| Sample ID | Experiment target | Biosample term name | Cell type | Tissue type | Source |
|---|---|---|---|---|---|
| TcoF_01_21980 | Rb1 | MEFs | Embryonic Fibroblast | None | Cistrome |
| TcoF_01_21979 | Rb1 | MEFs | Embryonic Fibroblast | None | Cistrome |
| TcoF_01_21978 | Rb1 | None | Embryonic Fibroblast | None | Cistrome |
| TcoF_01_21977 | Rb1 | None | Embryonic Fibroblast | None | Cistrome |
Downstream target genes of Rb1
Protein-protein interaction of Rb1
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| Rb1 | Hdac1 | Affinity Capture-Western | 11684023 | 10090 | 10090 | BIOGRID |
| Rb1 | Smarca4 | Two-hybrid | 7923370 | 10090 | 10090 | BIOGRID |
| Rb1 | GATA1 | Affinity Capture-Western | 19513100 | 10090 | 9606 | BIOGRID |
| Rb1 | Hmga2 | Affinity Capture-Western | 16766265 | 10090 | 10090 | BIOGRID |
| Rb1 | Hdac1 | Affinity Capture-Western | 10409740 | 10090 | 10090 | BIOGRID |
| Rb1 | Psmd10 | Affinity Capture-Western | 17292836 | 10090 | 10090 | BIOGRID |
| Rb1 | Rbak | Two-hybrid | 10702291 | 10090 | 10090 | BIOGRID |
| Rb1 | Rbak | Reconstituted Complex | 10702291 | 10090 | 10090 | BIOGRID |
| Rb1 | PPP1CA | Two-hybrid | 12434308 | 10090 | 9913 | BIOGRID |
| Rb1 | Neurod1 | Affinity Capture-Western | 15701640 | 10090 | 10090 | BIOGRID |
| Rb1 | Cebpb | Affinity Capture-Western | 8946919 | 10090 | 10090 | BIOGRID |
| Rb1 | Morf4l1 | Affinity Capture-Western | 15367658 | 10090 | 10090 | BIOGRID |
| Rb1 | Mrfap1 | Affinity Capture-Western | 15367658 | 10090 | 10090 | BIOGRID |
| Rb1 | Jarid2 | Affinity Capture-Western | 15870077 | 10090 | 10090 | BIOGRID |
| Rb1 | Pax2 | Affinity Capture-Western | 12200151 | 10090 | 10090 | BIOGRID |
| Rb1 | Prkcb | Affinity Capture-Western | 11805327 | 10090 | 10090 | BIOGRID |
| Rb1 | Abt1 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Rb1 | Ajuba | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Rb1 | Arnt | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Rb1 | Crebbp | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Rb1 | Deaf1 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Rb1 | Epas1 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Rb1 | Hmga2 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Rb1 | Ncor1 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Rb1 | Nfix | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Rb1 | Nr4a3 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Rb1 | Pax8 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Rb1 | Pou2f3 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Rb1 | Rarg | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Rb1 | Rbl1 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Rb1 | Rbl2 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Rb1 | Rcor2 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Rb1 | Smyd2 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Rb1 | Snapc1 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Rb1 | Tfdp1 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Rb1 | Wwtr1 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Rb1 | Yap1 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
Annotation of Rb1
Expression of Rb1
Disease information of Rb1