TcoF overview
TcoF: Rbm39
GeneID: 170791
Name: RNA-binding protein 39
Ensembl: ENSMUSG00000027620
Species: Mouse
Class: class 3
Family: RNA binding protein
Disease: --
Go-trem: 12
Pathway: --
Super Enhancer:

chr2:156189312-156191407 chr2:156189244-156191302 chr2:156189414-156205613 chr2:156202549-156205154 chr2:156189278-156209861 chr2:156189304-156203849 chr2:156199226-156203735 chr2:156202504-156203689 chr2:156202430-156203370 chr2:156202520-156203251 chr2:156202429-156203875 chr2:156202463-156203666 chr2:156189689-156203346 chr2:156202177-156203842 chr2:156189489-156224796 chr2:156202546-156203592 chr2:156190151-156203757 chr2:156155087-156155697 chr2:156189181-156203552 chr2:156189134-156203341 chr2:156202380-156203447 chr2:156189149-156203544 chr2:156189137-156191527 chr2:156202469-156203800 chr2:156199494-156209570 chr2:156199873-156200297 chr2:156189771-156191242

Enhancer:

chr2:155450770-155451370 chr2:155504500-155510550 chr2:155511150-155517870 chr2:155554730-155554960 chr2:155630300-155633130 chr2:155644810-155644900 chr2:155645840-155647800 chr2:155649770-155651860 chr2:155651940-155652060 chr2:155703980-155706500 chr2:155766040-155766760 chr2:155768150-155770170 chr2:155782390-155786480 chr2:155892360-155892540 chr2:155907520-155920610 chr2:155929160-155937520 chr2:155967980-155969100 chr2:155969190-155969750 chr2:155970320-155971330 chr2:155973920-155974020 chr2:155974090-155974970 chr2:155984970-155987300 chr2:155987360-155987560 chr2:155987700-155988460 chr2:155988610-155990540 chr2:156004970-156005160 chr2:156005310-156005620 chr2:156022530-156037050 chr2:156056920-156062120 chr2:156066020-156077510 chr2:156096600-156098270 chr2:156098390-156099410 chr2:156138130-156138200 chr2:156154190-156155680 chr2:156177780-156178930 chr2:156179040-156182260 chr2:156211510-156213790 chr2:156254200-156261420 chr2:156278050-156284080 chr2:156301740-156309480 chr2:156309580-156319630 chr2:156320850-156321000 chr2:156442940-156443940 chr2:156542740-156546440 chr2:156546820-156547010 chr2:156547830-156571020 chr2:156689150-156690990 chr2:156138530-156142820 chr2:155975070-155976470 chr2:155782390-155782710 chr2:155891400-155891570 chr2:155937160-155937520 chr2:155970320-155970490 chr2:156082930-156083600 chr2:156365000-156365240 chr2:155768150-155768670 chr2:155782390-155783230 chr2:155891400-155891860 chr2:155936100-155937520 chr2:155968980-155969100 chr2:155989200-155990540 chr2:156022530-156031330 chr2:156082160-156084900 chr2:156257850-156259910 chr2:156303710-156305990 chr2:156309890-156317210 chr2:156138530-156139190 chr2:156301740-156303020 chr2:155782390-155782720 chr2:155936780-155937520 chr2:155969570-155969750 chr2:155970320-155970380 chr2:156005040-156005160 chr2:155601510-155602030 chr2:155891400-155891490 chr2:155937280-155937520 chr2:156028960-156029240 chr2:156233920-156234230 chr2:156138530-156138790 chr2:155782390-155782750 chr2:155936860-155937520 chr2:155970320-155970690 chr2:156301740-156302280 chr2:155936380-155937520 chr2:155970320-155970510 chr2:156138530-156139010 chr2:155933990-155937520 chr2:156081680-156085980 chr2:156093270-156093980 chr2:155782390-155782700 chr2:155800210-155801400 chr2:155811100-155811550 chr2:155811890-155812730 chr2:155936520-155937520 chr2:155970320-155971120 chr2:156082080-156085120 chr2:156138530-156139120 chr2:155969280-155969750 chr2:155970320-155970970 chr2:155891400-155891850 chr2:155936430-155937520 chr2:156093270-156093840 chr2:155455410-155455990 chr2:155456120-155456210 chr2:155456320-155456410 chr2:155456610-155456740 chr2:155457090-155457210 chr2:155466290-155467320 chr2:155601370-155618260 chr2:155623910-155625420 chr2:155638090-155639630 chr2:155639890-155641440 chr2:155645840-155647690 chr2:155651260-155651860 chr2:155727610-155730920 chr2:155782390-155783400 chr2:155814160-155815230 chr2:155815350-155815950 chr2:155818510-155820300 chr2:155820420-155820580 chr2:155820720-155821050 chr2:155821150-155822000 chr2:155892600-155892820 chr2:155892860-155893040 chr2:155893070-155893190 chr2:155893290-155893480 chr2:155893550-155893670 chr2:155893780-155894100 chr2:155894270-155894870 chr2:155904150-155904300 chr2:155904390-155904480 chr2:155904550-155904630 chr2:155904710-155904790 chr2:155904970-155905070 chr2:155905200-155907580 chr2:155935940-155937520 chr2:155968520-155969100 chr2:155970320-155970810 chr2:156022530-156026240 chr2:156027530-156031400 chr2:156054910-156063190 chr2:156113810-156117450 chr2:156285710-156289280 chr2:156289480-156291310 chr2:156319830-156320690 chr2:156320850-156321590 chr2:156321700-156322220 chr2:156391040-156392600 chr2:156437770-156438200 chr2:156438310-156438680 chr2:156439590-156443790 chr2:156490710-156493960 chr2:156560420-156564250 chr2:156698200-156698650 chr2:156700270-156700610 chr2:156705680-156708340 chr2:155516370-155517870 chr2:156138530-156139860 chr2:156547830-156549340 chr2:155782390-155783430 chr2:155813690-155814040 chr2:155936000-155937520 chr2:155968120-155969100 chr2:155970320-155970890 chr2:156027380-156030850 chr2:156055450-156062810 chr2:156254560-156256760 chr2:156257030-156259870 chr2:156264360-156266700 chr2:156138530-156139890 chr2:155935820-155937520 chr2:156027100-156027730 chr2:156028000-156029250 chr2:156058520-156060470 chr2:156082520-156084830 chr2:155782390-155782630 chr2:155937230-155937520 chr2:156301740-156302790 chr2:155932250-155937520 chr2:155970930-155971330 chr2:156022530-156029290 chr2:156081410-156086350 chr2:156024910-156026720 chr2:156027770-156030370 chr2:155970320-155970790 chr2:156232650-156233600 chr2:155782390-155783620 chr2:155891970-155892300 chr2:155936210-155937520 chr2:156022530-156026940 chr2:156254480-156259860 chr2:156270350-156281850 chr2:156138530-156139020 chr2:155936270-155937520 chr2:155970320-155970770 chr2:155936420-155937520 chr2:155970320-155970700 chr2:156265780-156266710 chr2:155688280-155689870 chr2:155935980-155937520 chr2:155392620-155393420 chr2:155440230-155441130 chr2:155441230-155441540 chr2:155645840-155647530 chr2:155650810-155651860 chr2:155782390-155783560 chr2:155812850-155814040 chr2:155845360-155845440 chr2:155845720-155846070 chr2:155846310-155846470 chr2:155846570-155848250 chr2:155848340-155848830 chr2:155848990-155849680 chr2:155849830-155850200 chr2:155929340-155937520 chr2:156047690-156049070 chr2:156049180-156051890 chr2:156059030-156062120 chr2:156126700-156128510 chr2:156606370-156606720 chr2:156754610-156755660 chr2:156755700-156756950 chr2:155934230-155937520 chr2:155968630-155969100 chr2:156049180-156051350 chr2:156127080-156128510 chr2:156138530-156140180 chr2:155936590-155937520 chr2:156028190-156029510 chr2:156265210-156266770 chr2:155936450-155937520 chr2:155968790-155969100 chr2:155970320-155970870 chr2:156138530-156139200 chr2:155543030-155543270 chr2:155782390-155783500 chr2:155936090-155937520 chr2:156028320-156029250 chr2:156082080-156086070 chr2:155645840-155646710 chr2:155782390-155782550 chr2:155969590-155969750 chr2:155970320-155970480 chr2:155769210-155769620 chr2:155782390-155782900 chr2:155891400-155891470 chr2:155915380-155915790 chr2:155936800-155937520 chr2:156004980-156005160 chr2:156265840-156266580 chr2:156301740-156301970 chr2:155937270-155937520 chr2:155970320-155970420 chr2:155968470-155969100 chr2:156022530-156031380 chr2:156248770-156261940 chr2:156264360-156283240 chr2:155395070-155395820 chr2:155645840-155646480 chr2:155651540-155651860 chr2:155782390-155783000 chr2:155936360-155937520 chr2:155968900-155969100 chr2:155970320-155970850 chr2:156004990-156005160 chr2:156028140-156029310 chr2:156075750-156077410 chr2:156082230-156084800 chr2:156085550-156086200 chr2:156115160-156117150 chr2:156120600-156122380 chr2:156181590-156182260 chr2:156254790-156256820 chr2:156257040-156259630 chr2:156271700-156273720 chr2:156276890-156277530 chr2:156336610-156337520 chr2:156337550-156339200 chr2:156122480-156124250 chr2:156301740-156303490 chr2:155694400-155702600 chr2:155727580-155730600 chr2:155782390-155783800 chr2:155818510-155819000 chr2:155934000-155937520 chr2:155968740-155969100 chr2:156120010-156122380 chr2:156122480-156124200 chr2:156138530-156139600 chr2:155933800-155937520 chr2:155970600-155971330 chr2:155601480-155602170 chr2:155651110-155651860 chr2:155688780-155689770 chr2:155782390-155782930 chr2:155936740-155937520 chr2:155968850-155969100 chr2:156232600-156233780 chr2:156265400-156266700 chr2:156420600-156421780 chr2:156439590-156441230 chr2:156301740-156302920 chr2:155651420-155651860 chr2:155688650-155689690 chr2:155697660-155699780 chr2:155768870-155770170 chr2:155936480-155937520 chr2:156024940-156026810 chr2:156028210-156029280 chr2:156265310-156266640 chr2:156138530-156138810 chr2:155436990-155437320 chr2:155441230-155443250 chr2:155443280-155443380 chr2:155443470-155443590 chr2:155443660-155444460 chr2:155446260-155446510 chr2:155446630-155446720 chr2:155446870-155447000 chr2:155447170-155447500 chr2:155645840-155647180 chr2:155782390-155782850 chr2:155810760-155810960 chr2:155822070-155822540 chr2:155844650-155844870 chr2:155845180-155845260 chr2:155849830-155850080 chr2:155968680-155969100 chr2:156138530-156138970 chr2:155936400-155937520 chr2:155968800-155969100 chr2:156028250-156029480 chr2:155936830-155937520 chr2:155969300-155969750 chr2:156082240-156084750 chr2:156103280-156105060 chr2:155936460-155937520 chr2:156028320-156029240 chr2:156082140-156084030 chr2:156364360-156365290 chr2:155931100-155937520 chr2:156022530-156029610 chr2:156138530-156139840 chr2:155640390-155640930 chr2:155651410-155651860 chr2:155707920-155708550 chr2:155728720-155729240 chr2:155749590-155751920 chr2:155782390-155782950 chr2:155815350-155815810 chr2:155892360-155892450 chr2:155934220-155937520 chr2:156026920-156027720 chr2:156049320-156050320 chr2:156319940-156320690 chr2:156301740-156302070 chr2:155936040-155937520 chr2:156213190-156213790 chr2:155782390-155782890 chr2:155970320-155970750 chr2:156024910-156026600 chr2:156027980-156030100 chr2:156067280-156068040 chr2:156082030-156084340 chr2:156156870-156157710 chr2:156174870-156175650 chr2:156265680-156266380 chr2:156138530-156138930 chr2:156005100-156005160 chr2:155936840-155937520 chr2:155969390-155969750 chr2:156082140-156084900 chr2:156233300-156234540 chr2:156265240-156267060 chr2:155936580-155937520 chr2:155936680-155937520 chr2:156023970-156031320 chr2:156070450-156077510 chr2:156081280-156085910 chr2:156113160-156113530 chr2:156253140-156257260 chr2:156268060-156275160 chr2:156279680-156284780 chr2:156285010-156289360 chr2:156138530-156138800 chr2:155969490-155969750 chr2:155782390-155784210 chr2:155934810-155937520 chr2:155968590-155969100 chr2:155970320-155970500 chr2:156022530-156025850 chr2:156138530-156139320 chr2:155873720-155873920 chr2:155936650-155937520 chr2:156028280-156029180 chr2:156120680-156122380 chr2:155936900-155937520 chr2:156301740-156303090 chr2:155769080-155770170 chr2:155782390-155782770 chr2:155969380-155969750 chr2:156082040-156085920 chr2:156093270-156094110 chr2:155651520-155651860 chr2:155937210-155937520 chr2:155969400-155969750 chr2:155970320-155971240 chr2:156005020-156005160 chr2:156082240-156084940 chr2:156364650-156365300 chr2:156138530-156139210 chr2:155873660-155873920 chr2:155970320-155970450 chr2:156005000-156005160 chr2:156082400-156083420 chr2:156103930-156104670 chr2:156111220-156111630 chr2:156112040-156113530 chr2:156113810-156114340 chr2:156138530-156138750 chr2:155891400-155891620 chr2:155936660-155937520 chr2:155970320-155970610 chr2:155937150-155937520 chr2:155969560-155969750 chr2:156212290-156213790 chr2:156025010-156026720 chr2:156257150-156259640 chr2:155782390-155783170 chr2:155936910-155937520 chr2:155969320-155969750 chr2:156028340-156029370 chr2:155891400-155891780 chr2:155969440-155969750 chr2:155970320-155970620 chr2:156025680-156026330 chr2:156255560-156255890 chr2:156258470-156259140

Promoter:

chr2:156178240-156182240

 ChIP-seq based regulatory details of Rbm39
Sample ID Experiment target Biosample term name Cell type Tissue type Source
 Downstream target genes of Rbm39
 Upstream regulatory details of Rbm39
 Protein-protein interaction of Rbm39
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
Rbm39 NCOA6 Reconstituted Complex 11704680 10090 9606 BIOGRID
Rbm39 NCOA6 Two-hybrid 11704680 10090 9606 BIOGRID
Rbm39 Eif4a3 Co-fractionation 32325033 10090 10090 BIOGRID
Rbm39 Tardbp Co-fractionation 32325033 10090 10090 BIOGRID
Rbm39 Ctnnbl1 Co-fractionation 32325033 10090 10090 BIOGRID
Rbm39 Ddx39b Co-fractionation 32325033 10090 10090 BIOGRID
Rbm39 Prpf3 Co-fractionation 32325033 10090 10090 BIOGRID
Rbm39 Prpf8 Co-fractionation 32325033 10090 10090 BIOGRID
 Annotation of Rbm39
 Disease information of Rbm39