TcoF overview
TcoF: Rnf4
GeneID: 19822
Name: E3 ubiquitin-protein ligase RNF4
Ensembl: ENSMUSG00000029110
Species: Mouse
Class: NA
Family: Ring finger protein
Disease: --
Go-trem: 36
Pathway: 4
Super Enhancer:

chr5:34363379-34363759 chr5:34292428-34304416 chr5:34326045-34326984 chr5:34326263-34327592 chr5:34325735-34327484 chr5:34358769-34361159 chr5:34294681-34295895 chr5:34326257-34327670 chr5:34294123-34295500 chr5:34346943-34347776 chr5:34326389-34327700 chr5:34381785-34382749 chr5:34324658-34325661 chr5:34325992-34346972 chr5:34293529-34296039 chr5:34326667-34328579 chr5:34326419-34327667 chr5:34326805-34327466

Enhancer:

chr5:34276050-34278670 chr5:34326290-34326400 chr5:34326780-34327540 chr5:34341180-34343420 chr5:34348560-34349820 chr5:34374400-34375390 chr5:34375470-34376420 chr5:34447870-34449650 chr5:34509000-34510050 chr5:34511090-34512030 chr5:34519790-34520240 chr5:34521570-34526960 chr5:34526990-34529970 chr5:34689550-34690910 chr5:34713070-34729080 chr5:34868550-34880080 chr5:34916560-34916790 chr5:34916860-34922700 chr5:34922980-34934980 chr5:34977610-34977690 chr5:34977800-34978010 chr5:34978180-34978250 chr5:34978410-34978660 chr5:34978770-34979050 chr5:34979150-34979240 chr5:34979430-34979570 chr5:35000650-35002490 chr5:35003650-35004620 chr5:35104750-35106600 chr5:34667750-34668890 chr5:34511720-34512030 chr5:34713070-34713450 chr5:34885750-34886010 chr5:34278010-34278670 chr5:34398020-34399820 chr5:34447080-34447820 chr5:34447870-34449390 chr5:34511370-34512030 chr5:34522840-34526960 chr5:34530070-34530150 chr5:34713070-34714170 chr5:34868550-34870450 chr5:34916860-34917520 chr5:35001800-35002490 chr5:35003650-35004190 chr5:34339850-34341010 chr5:34884660-34886010 chr5:34511770-34512030 chr5:34594330-34595250 chr5:34892080-34892220 chr5:34924610-34925170 chr5:34511960-34512030 chr5:34916860-34917170 chr5:34511580-34512030 chr5:34507980-34508560 chr5:34528460-34529970 chr5:34538740-34539220 chr5:34539320-34540130 chr5:34541540-34542240 chr5:34713070-34715000 chr5:34809090-34810530 chr5:34886230-34887480 chr5:34916860-34918740 chr5:34976980-34977070 chr5:34977160-34977230 chr5:34977340-34977490 chr5:34506500-34508490 chr5:34574890-34575950 chr5:34576040-34576930 chr5:34583520-34585820 chr5:34590300-34597850 chr5:34509940-34510050 chr5:34541540-34542120 chr5:34511350-34512030 chr5:34528910-34529970 chr5:34886230-34888020 chr5:34891370-34892220 chr5:34892440-34893660 chr5:34748690-34750960 chr5:34277750-34278670 chr5:34327650-34328380 chr5:34511130-34512030 chr5:34540230-34541320 chr5:34713070-34714780 chr5:34868550-34869940 chr5:34891360-34892220 chr5:34892440-34894200 chr5:34916860-34918450 chr5:34924070-34931760 chr5:34975770-34976290 chr5:34976660-34976770 chr5:34976860-34976940 chr5:35001550-35002490 chr5:35003650-35004330 chr5:35104750-35105820 chr5:34520400-34521450 chr5:34946710-34947330 chr5:34511160-34512030 chr5:34522520-34526960 chr5:34540230-34541420 chr5:34583660-34585820 chr5:34624180-34630740 chr5:34640970-34643090 chr5:34713070-34714210 chr5:34891210-34892220 chr5:34916860-34918410 chr5:34924060-34925920 chr5:34668640-34668890 chr5:34584770-34585820 chr5:34886230-34887370 chr5:34916860-34919190 chr5:34924330-34925690 chr5:34932650-34933690 chr5:34511470-34512030 chr5:34868550-34869730 chr5:34916860-34917890 chr5:34924120-34926080 chr5:34511150-34512030 chr5:34528860-34529970 chr5:34628690-34630740 chr5:34713070-34713670 chr5:34868550-34870090 chr5:34891710-34892220 chr5:34892440-34892960 chr5:34930660-34934970 chr5:34975210-34976290 chr5:35003650-35004120 chr5:34511500-34512030 chr5:34528750-34529970 chr5:34628660-34630740 chr5:34713070-34713470 chr5:34916860-34917410 chr5:34628850-34630740 chr5:34891910-34892220 chr5:34892440-34893420 chr5:34668830-34668890 chr5:34326780-34327030 chr5:34511360-34512030 chr5:34892000-34892220 chr5:34892440-34893200 chr5:34916860-34917450 chr5:34511400-34512030 chr5:34506400-34508560 chr5:34713070-34714290 chr5:34868550-34871760 chr5:34916860-34928450 chr5:34974950-34976290 chr5:34981690-34981830 chr5:34981950-34983480 chr5:35001540-35002490 chr5:35003650-35004080 chr5:35104750-35111640 chr5:35316500-35317860 chr5:35142160-35146360 chr5:34713070-34714190 chr5:34809090-34812540 chr5:34525200-34526960 chr5:34526990-34528060 chr5:34560510-34561220 chr5:34868580-34869410 chr5:34916860-34918480 chr5:34924160-34925710 chr5:34511690-34512030 chr5:34524910-34526960 chr5:35002210-35002490 chr5:34523690-34526960 chr5:34584180-34585820 chr5:34629150-34630740 chr5:34868550-34868920 chr5:34511640-34512030 chr5:34529480-34529970 chr5:34594250-34595200 chr5:34629110-34630360 chr5:34713070-34713490 chr5:34868550-34868900 chr5:34892150-34892220 chr5:34893050-34893450 chr5:34916860-34917060 chr5:34713070-34714430 chr5:34929870-34938690 chr5:34981950-34983510 chr5:34525260-34526960 chr5:34527360-34529970 chr5:34629120-34630740 chr5:34916860-34918420 chr5:34924460-34925760 chr5:34932310-34933210 chr5:34713070-34713660 chr5:34868550-34869620 chr5:34891000-34892220 chr5:34892440-34893550 chr5:34916860-34922400 chr5:35001000-35002490 chr5:35003650-35004400 chr5:35104750-35106000 chr5:34591800-34597800 chr5:34528290-34529970 chr5:34629140-34630740 chr5:34713070-34713400 chr5:34868550-34869220 chr5:34891760-34892220 chr5:34892440-34893810 chr5:35104750-35105310 chr5:34511670-34512030 chr5:34528050-34529970 chr5:34592010-34593290 chr5:34594460-34595630 chr5:34713070-34713200 chr5:34868550-34868940 chr5:34892110-34892220 chr5:34892440-34892910 chr5:34916860-34917100 chr5:35003650-35003980 chr5:35104750-35105860 chr5:34123250-34125120 chr5:34511660-34512030 chr5:34810150-34812460 chr5:34868550-34873070 chr5:34916580-34916790 chr5:34916860-34921870 chr5:34924120-34927470 chr5:35001660-35002490 chr5:35104750-35105470 chr5:35313580-35317860 chr5:34529120-34529970 chr5:34592190-34593050 chr5:34892100-34892220 chr5:34523020-34526960 chr5:34924660-34925820 chr5:34523820-34526960 chr5:34584650-34585820 chr5:34713070-34714240 chr5:34868550-34869840 chr5:34891780-34892220 chr5:34892440-34892800 chr5:34916860-34917720 chr5:34583810-34585820 chr5:34591770-34597300 chr5:34713070-34718240 chr5:34916860-34920240 chr5:35003650-35007220 chr5:34667170-34668890 chr5:34585360-34585820 chr5:34585960-34586400 chr5:34507480-34508560 chr5:34612320-34613060 chr5:34713070-34714760 chr5:34885590-34886010 chr5:34916860-34919960 chr5:34920580-34922590 chr5:35001400-35002490 chr5:35072690-35073570 chr5:35104750-35106330 chr5:35142160-35144610 chr5:34527430-34529970 chr5:34583280-34585820 chr5:34626840-34630740 chr5:34713070-34714400 chr5:34892440-34893070 chr5:34924290-34927260 chr5:34511380-34512030 chr5:34525150-34526960 chr5:34584120-34585820 chr5:34585960-34586210 chr5:34591610-34596320 chr5:34628930-34630740 chr5:34713070-34713750 chr5:34916860-34917240 chr5:34668580-34668890 chr5:34629130-34629440 chr5:34577130-34578650 chr5:34511320-34512030 chr5:34583720-34585820 chr5:34585960-34586920 chr5:34886230-34887680 chr5:34540230-34540480 chr5:34584400-34585820 chr5:34585960-34586130 chr5:34885150-34886010 chr5:34522700-34526960 chr5:34924180-34932030 chr5:34529240-34529970 chr5:34713070-34713460 chr5:34509970-34510050 chr5:34523770-34526960 chr5:34868550-34870810 chr5:34916860-34917870 chr5:34511610-34512030 chr5:34868550-34869260 chr5:34917270-34918290 chr5:34924540-34925160 chr5:34511480-34512030 chr5:34528400-34529970 chr5:34629760-34630740 chr5:34713070-34713790 chr5:34868550-34869370 chr5:34527810-34529970 chr5:34809090-34811230 chr5:34747580-34753050 chr5:34508460-34508560 chr5:34541540-34542180 chr5:34868550-34870300 chr5:34916860-34918580 chr5:34530080-34530150 chr5:34540970-34541420 chr5:34590840-34593870 chr5:34594150-34597340 chr5:34597730-34598110 chr5:34629770-34630740 chr5:34891740-34892220 chr5:34750070-34750990 chr5:34511450-34512030 chr5:34529490-34529970 chr5:34892040-34892220 chr5:34892440-34892820 chr5:34511780-34512030 chr5:34529010-34529970 chr5:34628830-34630740 chr5:34446200-34446540 chr5:34446610-34446820 chr5:34447870-34448900 chr5:34511600-34512030 chr5:34524850-34526930 chr5:34527690-34529970 chr5:34868550-34869860 chr5:34916860-34917070 chr5:34978810-34979050 chr5:34629140-34630060 chr5:34924660-34925000 chr5:34932760-34933170

Promoter:

chr5:34334389-34338389

 ChIP-seq based regulatory details of Rnf4
Sample ID Experiment target Biosample term name Cell type Tissue type Source
 Downstream target genes of Rnf4
 Upstream regulatory details of Rnf4
 Protein-protein interaction of Rnf4
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
Rnf4 Gsc2 Affinity Capture-Western 10822263 10090 10090 BIOGRID
Rnf4 SUMO2 Biochemical Activity 24912682 10090 9606 BIOGRID
Rnf4 SUMO3 Co-crystal Structure 24969970 10090 9606 BIOGRID
Rnf4 Rnf4 Co-crystal Structure 20681948 10090 10090 BIOGRID
 Annotation of Rnf4
 Disease information of Rnf4