TcoF overview
| TcoF: | Rprd1b | |
| GeneID: | 70470 | |
| Name: | Regulation of nuclear pre-mRNA domain-containing protein 1B | |
| Ensembl: | ENSMUSG00000027651 | |
| Species: | Mouse | |
| Class: | NA | |
| Family: | Others | |
| Disease: | -- | |
| Go-trem: | 10 | |
| Pathway: | 5 | |
| Super Enhancer: | chr2:158056484-158057421 chr2:158065132-158067195 chr2:158063881-158065015 chr2:158036927-158037700 chr2:158059120-158059767 chr2:158058038-158060481 chr2:158066201-158067113 chr2:158064293-158065518 chr2:158062913-158063603 chr2:158039519-158039988 chr2:158036823-158048461 chr2:158036797-158037317 |
|
| Enhancer: |
chr2:157574500-157580000 chr2:157614860-157614980 chr2:157696920-157705100 chr2:157854780-157860700 chr2:157896390-157898980 chr2:157952000-157952840 chr2:157955190-157957060 chr2:157960100-157964440 chr2:157968910-157972020 chr2:157990550-157997750 chr2:158014220-158017740 chr2:158017790-158018800 chr2:157957240-157958160 chr2:157958870-157959220 chr2:157854780-157856190 chr2:157954470-157955050 chr2:157969640-157972020 chr2:157854780-157854940 chr2:157854780-157855280 chr2:157992370-157992720 chr2:157569420-157574440 chr2:157854780-157857220 chr2:157990790-157994920 chr2:158147850-158150240 chr2:158185160-158186190 chr2:158186330-158186670 chr2:157643840-157645180 chr2:157854780-157856640 chr2:157992020-157993830 chr2:157854780-157855890 chr2:157992000-157993100 chr2:158148540-158149530 chr2:158186930-158187140 chr2:157391210-157391980 chr2:157571980-157573000 chr2:157854780-157855780 chr2:157993120-157993910 chr2:158235830-158236520 chr2:157683870-157686240 chr2:157770450-157771110 chr2:157824050-157825520 chr2:157854780-157855620 chr2:157880930-157884380 chr2:157884560-157886790 chr2:157958290-157959120 chr2:157969970-157972020 chr2:158030540-158031430 chr2:158041740-158042160 chr2:158043510-158044430 chr2:158066640-158069230 chr2:158108430-158109960 chr2:158201620-158201810 chr2:158202060-158202720 chr2:158039220-158041560 chr2:157614860-157619910 chr2:157683370-157688310 chr2:157746560-157750480 chr2:157770450-157771000 chr2:157881340-157884380 chr2:157884560-157887160 chr2:157958290-157959250 chr2:157963450-157964440 chr2:157969610-157972020 chr2:158053420-158054810 chr2:158065810-158069230 chr2:158185350-158186190 chr2:157522260-157522540 chr2:157632810-157634740 chr2:157666190-157666820 chr2:157712900-157713930 chr2:158044020-158045220 chr2:158054230-158054730 chr2:158182990-158184910 chr2:157892040-157892630 chr2:157958290-157959410 chr2:157982120-157982930 chr2:157991730-157992800 chr2:158004620-158005150 chr2:158132520-158132920 chr2:157854780-157854880 chr2:157960100-157963240 chr2:157969670-157972020 chr2:157489380-157490090 chr2:157530060-157534200 chr2:157665570-157667830 chr2:157782650-157784420 chr2:157799710-157802480 chr2:157971540-157972020 chr2:158003390-158006000 chr2:157854780-157855390 chr2:158185770-158186190 chr2:157713500-157713920 chr2:157516520-157518810 chr2:157800150-157801930 chr2:157854780-157854960 chr2:157854780-157855490 chr2:157854780-157855900 chr2:157617300-157621730 chr2:157759210-157761060 chr2:157854780-157861730 chr2:157861860-157865630 chr2:157884560-157887120 chr2:157937560-157941250 chr2:157952670-157952840 chr2:157953090-157954370 chr2:157982120-157988380 chr2:158181770-158182930 chr2:158235830-158242670 chr2:158407600-158411490 chr2:158430170-158436260 chr2:158452290-158453790 chr2:157854780-157857360 chr2:157885060-157886040 chr2:157937670-157942140 chr2:157958720-157959570 chr2:157982120-157982840 chr2:157992030-157993850 chr2:158132520-158132930 chr2:158135780-158137600 chr2:157645330-157645880 chr2:157938600-157940230 chr2:157957240-157958020 chr2:157645330-157645730 chr2:157854780-157857670 chr2:157952780-157952840 chr2:157963520-157964440 chr2:157957240-157957890 chr2:157854780-157855730 chr2:157950120-157950270 chr2:157963720-157964440 chr2:157854780-157855600 chr2:157884560-157884670 chr2:157896430-157897610 chr2:157934200-157936320 chr2:157938540-157941180 chr2:157982330-157988090 chr2:157992180-157997180 chr2:158016040-158017740 chr2:158017790-158018360 chr2:158047690-158050010 chr2:158053460-158054810 chr2:158066860-158069230 chr2:158132520-158133170 chr2:157695420-157696390 chr2:157891860-157892650 chr2:158039990-158041560 chr2:157941230-157942140 chr2:157517520-157518910 chr2:157521380-157522840 chr2:157541420-157542300 chr2:157549360-157551470 chr2:157576660-157578830 chr2:157713480-157716150 chr2:157770450-157770550 chr2:157800080-157802070 chr2:157854780-157855050 chr2:158004460-158005010 chr2:158054520-158054810 chr2:158169280-158170060 chr2:158186410-158186670 chr2:158202060-158202140 chr2:158235830-158236220 chr2:157854780-157854990 chr2:157971410-157972020 chr2:158003440-158004880 chr2:157662420-157667830 chr2:157854780-157856510 chr2:157698800-157699480 chr2:157770450-157770750 chr2:157817700-157818700 chr2:157818790-157819080 chr2:157854780-157855560 chr2:157863270-157863900 chr2:157896410-157897980 chr2:157937780-157940210 chr2:157954030-157954370 chr2:157960680-157962970 chr2:157992150-157993080 chr2:158015990-158017740 chr2:158017790-158018640 chr2:158024820-158025580 chr2:158053630-158054810 chr2:158132520-158133030 chr2:157957240-157957670 chr2:158039580-158041560 chr2:157941350-157942140 chr2:157759310-157761060 chr2:157854780-157857400 chr2:157894400-157896090 chr2:157896390-157900660 chr2:157938000-157941400 chr2:157991000-157994000 chr2:158132520-158133200 chr2:158183520-158184910 chr2:158235830-158242000 chr2:157761230-157762800 chr2:157165300-157166580 chr2:157282260-157282810 chr2:157288540-157288710 chr2:157288810-157290360 chr2:157290510-157291600 chr2:157297570-157302810 chr2:157312980-157314070 chr2:157337920-157341120 chr2:157345190-157346620 chr2:157361630-157363860 chr2:157363940-157368990 chr2:157371730-157372970 chr2:157385990-157386180 chr2:157386270-157386600 chr2:157390940-157391980 chr2:157517330-157518980 chr2:157521720-157522520 chr2:157666000-157667830 chr2:157713440-157715010 chr2:157748600-157749790 chr2:157770450-157770710 chr2:157782820-157784210 chr2:157800080-157802180 chr2:157854780-157855210 chr2:157955830-157957060 chr2:158004360-158005800 chr2:158054580-158054810 chr2:158185320-158186190 chr2:157385280-157385810 chr2:157854780-157856630 chr2:157938880-157940240 chr2:158004860-158005770 chr2:158047860-158050480 chr2:157854780-157859240 chr2:157935260-157940230 chr2:157963430-157964440 chr2:157968910-157969560 chr2:157854780-157857730 chr2:157937840-157940230 chr2:157961400-157962670 chr2:158004860-158006030 chr2:158016740-158017260 chr2:158047870-158048810 chr2:158054490-158054810 chr2:158132520-158132980 chr2:157829280-157831620 chr2:157831990-157832750 chr2:157933100-157933460 chr2:157934470-157936550 chr2:157939590-157939820 chr2:157956030-157956420 chr2:157961170-157962880 chr2:157992030-157995890 chr2:158015900-158017740 chr2:158024500-158025410 chr2:157935160-157936190 chr2:157938780-157940110 chr2:157953090-157953890 chr2:158004760-158005760 chr2:158132520-158133160 chr2:157854780-157858280 chr2:157955860-157957060 chr2:157969510-157972020 chr2:157991480-157997010 chr2:158047480-158049960 chr2:157618440-157620850 chr2:157639760-157641140 chr2:157854780-157857290 chr2:157893960-157894820 chr2:157969710-157970850 chr2:157761240-157761930 chr2:157572130-157578620 chr2:157703030-157704640 chr2:157991300-157994380 chr2:157541050-157541880 chr2:157575520-157579360 chr2:157883280-157884380 chr2:157884560-157885880 chr2:157885260-157886120 chr2:157663290-157667820 chr2:157665820-157666830 chr2:157956140-157957060 chr2:157960100-157960960 chr2:157961440-157963170 chr2:157969370-157972020 chr2:157991940-157994950 chr2:158132520-158132950 chr2:157854780-157855640 chr2:157645330-157645650 chr2:157958870-157959980 chr2:157895800-157896090 chr2:157896390-157900100 chr2:157938320-157940250 chr2:158016210-158017740 chr2:158017790-158018550 chr2:158068630-158069230 chr2:158134530-158135330 chr2:158183870-158184910 chr2:157941330-157942140 chr2:157971910-157972020 chr2:157992000-157993980 chr2:157855750-157856060 chr2:157896390-157897920 chr2:157934440-157936320 chr2:157938600-157940220 chr2:157955990-157956570 chr2:157970760-157972020 chr2:158004710-158006030 chr2:158016330-158017150 chr2:158054440-158054810 chr2:157657380-157658170 chr2:157724600-157726350 chr2:157770450-157770670 chr2:157854780-157855420 chr2:157572000-157574140 chr2:157854780-157857240 chr2:157956070-157957060 chr2:157960100-157963210 chr2:157963390-157964440 chr2:157982120-157983540 chr2:158183980-158184910 chr2:157572130-157573600 chr2:157958330-157959980 chr2:157982120-157983480 chr2:157993140-157994630 chr2:157941370-157942140 chr2:157992400-157992960 chr2:157941320-157942140 chr2:157854780-157855110 chr2:157992370-157992800 chr2:157854780-157855140 chr2:157896920-157897590 chr2:157939190-157940160 chr2:157961200-157963000 chr2:157970830-157972020 chr2:157993500-157995530 chr2:158004450-158005880 chr2:158041740-158042000 chr2:158132520-158133020 chr2:158041400-158041560 chr2:157940380-157942140 chr2:157782060-157784580 chr2:157698800-157699860 chr2:157854780-157855470 chr2:157938780-157940250 chr2:157954220-157954370 chr2:157961460-157962810 chr2:157970960-157972020 chr2:158016300-158017740 chr2:158017790-158017930 chr2:158133540-158134410 chr2:158134530-158134670 chr2:157957240-157957550 chr2:157495600-157496280 chr2:157502040-157503130 chr2:157783440-157783920 chr2:157956110-157956400 chr2:158004720-158005330 |
|
| Promoter: |
chr2:158026793-158030793 |
ChIP-seq based regulatory details of Rprd1b
| Sample ID | Experiment target | Biosample term name | Cell type | Tissue type | Source |
|---|
Downstream target genes of Rprd1b
Protein-protein interaction of Rprd1b
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| Rprd1b | POLR2A | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | POLR2B | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | POLR2C | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | POLR2D | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | POLR2G | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | POLR2I | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | POLR2J | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | PPP1R10 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | SUPT4H1 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | SUPT5H | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | SUPT6H | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | AKAP1 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | CTR9 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | TOX4 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | SUPT16H | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | SETX | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | RPRD2 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | PHF3 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | PCF11 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | PAF1 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | HEATR3 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | RPRD1A | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | MCM10 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | IWS1 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | REXO1 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | CDC73 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | RPAP2 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | JADE1 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | WDR61 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | C7orf50 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | ELOF1 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | HDGFRP2 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | LEO1 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | WDR92 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Rprd1b | Sae1 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
Annotation of Rprd1b
Expression of Rprd1b
Disease information of Rprd1b