TcoF overview
TcoF: Snx6
GeneID: 72183
Name: Sorting nexin-6 [Cleaved into: Sorting nexin-6, N-terminally processed]
Ensembl: ENSMUSG00000005656
Species: Mouse
Class: NA
Family: Others
Disease: --
Go-trem: 19
Pathway: --
Super Enhancer:

chr12:54774442-54777136 chr12:54805554-54806661 chr12:54781323-54781741 chr12:54810303-54813101 chr12:54791294-54792170 chr12:54729095-54739312 chr12:54789493-54790134 chr12:54734467-54739526 chr12:54789049-54790305 chr12:54760561-54761707 chr12:54790979-54791665 chr12:54805851-54806388 chr12:54774498-54775533 chr12:54788762-54791851 chr12:54805409-54806738 chr12:54805640-54806307 chr12:54774488-54775930 chr12:54789282-54791916 chr12:54805680-54821720 chr12:54774595-54781833 chr12:54729810-54738959 chr12:54789709-54790302 chr12:54805382-54807918 chr12:54789003-54791835 chr12:54773860-54786065 chr12:54774594-54775984 chr12:54791242-54791727 chr12:54789181-54790088 chr12:54774439-54783297 chr12:54739810-54741793 chr12:54773591-54774334 chr12:54734213-54739119

Enhancer:

chr12:55667050-55671020 chr12:55793940-55796690 chr12:55835080-55836300 chr12:55837540-55840350 chr12:55922820-55925620 chr12:55934450-55937680 chr12:55962820-55963730 chr12:56055820-56065220 chr12:56081520-56086650 chr12:56086790-56087140 chr12:56158330-56160360 chr12:56160560-56162040 chr12:56162180-56163970 chr12:56225700-56228780 chr12:55720280-55723400 chr12:55796480-55796690 chr12:55963220-55963730 chr12:55796290-55796690 chr12:55830300-55830880 chr12:55834290-55836430 chr12:55838270-55840330 chr12:55819640-55820640 chr12:55796030-55796690 chr12:55830000-55831520 chr12:55834310-55836310 chr12:55838660-55840300 chr12:56059030-56062060 chr12:56155620-56158220 chr12:56225700-56226370 chr12:55819550-55820910 chr12:55796360-55796690 chr12:55830080-55831030 chr12:55835420-55836040 chr12:55839300-55840300 chr12:56085560-56086650 chr12:55819930-55820860 chr12:55834990-55835990 chr12:55838780-55840240 chr12:55838430-55839750 chr12:55796280-55796690 chr12:55830510-55830790 chr12:55838160-55839880 chr12:55963040-55963730 chr12:55835070-55835920 chr12:55666500-55671010 chr12:55795690-55796690 chr12:55829770-55831540 chr12:55834230-55836500 chr12:55838350-55840320 chr12:55923800-55924360 chr12:55819290-55820930 chr12:55829900-55831320 chr12:55834190-55836970 chr12:55837930-55840360 chr12:55962840-55963730 chr12:55819560-55820840 chr12:55666790-55670840 chr12:55795790-55796690 chr12:55829760-55831910 chr12:55834230-55835990 chr12:55838730-55840320 chr12:56084840-56086650 chr12:55819200-55820900 chr12:55795980-55796690 chr12:55830040-55832160 chr12:55834070-55836380 chr12:55837940-55840310 chr12:56085010-56086650 chr12:55818460-55820820 chr12:55795190-55796690 chr12:55819700-55820900 chr12:55560850-55561720 chr12:55795470-55796690 chr12:55829890-55831420 chr12:55834320-55836490 chr12:55838510-55840390 chr12:55935710-55936630 chr12:55962220-55962320 chr12:55962400-55962510 chr12:56085280-56086650 chr12:56225700-56227230 chr12:55819440-55821020 chr12:55835480-55835980 chr12:55830090-55831210 chr12:55834050-55836170 chr12:55963020-55963730 chr12:55819700-55820810 chr12:55796390-55796690 chr12:55830330-55830950 chr12:55835360-55835950 chr12:55839200-55839870 chr12:55819940-55820580 chr12:55830070-55833960 chr12:55834130-55836520 chr12:55836650-55840000 chr12:55920270-55922840 chr12:56225700-56230020 chr12:55816970-55820950 chr12:55796170-55796690 chr12:55830050-55831520 chr12:55834170-55836450 chr12:55838540-55840230 chr12:55819650-55820860 chr12:55795990-55796690 chr12:55838380-55840260 chr12:55962830-55963730 chr12:55819590-55820780 chr12:55829970-55831230 chr12:55834550-55836100 chr12:55819680-55820960 chr12:55830410-55831040 chr12:55835250-55835890 chr12:55839150-55839780 chr12:55819780-55820510 chr12:55795390-55796690 chr12:55829970-55831900 chr12:55834210-55836460 chr12:55838200-55840560 chr12:55935630-55937040 chr12:56085400-56086650 chr12:55819320-55820810 chr12:55829620-55831890 chr12:55834190-55836530 chr12:55838300-55840360 chr12:55962970-55963730 chr12:55817220-55821230 chr12:55830170-55831560 chr12:55834870-55835970 chr12:55838540-55840280 chr12:55935860-55936770 chr12:55819430-55820740 chr12:56085740-56086650 chr12:55830190-55831480 chr12:55834520-55836010 chr12:55819540-55820740 chr12:55796240-55796690 chr12:55829920-55831670 chr12:55834470-55836300 chr12:55838270-55840300 chr12:55819170-55820930 chr12:55743570-55745600 chr12:55829200-55833930 chr12:55834070-55836640 chr12:55836680-55842930 chr12:56055820-56057140 chr12:56058180-56074510 chr12:56154390-56158220 chr12:56169430-56176320 chr12:55816940-55822000 chr12:55795300-55796690 chr12:55829480-55833890 chr12:55834100-55836410 chr12:55838190-55840410 chr12:55920190-55922890 chr12:56083790-56086650 chr12:56154390-56157150 chr12:56162180-56163010 chr12:56225700-56228760 chr12:55817020-55821540 chr12:55796340-55796690 chr12:55829990-55831130 chr12:55834040-55836770 chr12:55920870-55922570 chr12:55963430-55963730 chr12:56060550-56061170 chr12:55819800-55820840 chr12:55795820-55796690 chr12:55935730-55936780 chr12:55975600-55976530 chr12:55796300-55796690 chr12:55830270-55831130 chr12:55834940-55835960 chr12:55838880-55840190 chr12:56591650-56591750 chr12:56591840-56592100 chr12:55819780-55820580 chr12:55796220-55796690 chr12:55935720-55936930 chr12:55829940-55831280 chr12:55834470-55836270 chr12:55838790-55840220 chr12:55931480-55932070 chr12:55935610-55936780 chr12:55975610-55976870 chr12:55819390-55820900 chr12:55838670-55839830 chr12:55796380-55796690 chr12:55830070-55830760 chr12:55835510-55836000 chr12:55820170-55820840 chr12:55935780-55936340 chr12:56085700-56086650 chr12:55796320-55796690 chr12:55830340-55831180 chr12:55835350-55835950 chr12:55839400-55840090 chr12:56087000-56087140 chr12:56225700-56225900 chr12:55819730-55820560 chr12:55795620-55796690 chr12:55829910-55831530 chr12:55834200-55836570 chr12:55838410-55841990 chr12:55819460-55821520 chr12:55526190-55527080 chr12:55560370-55561870 chr12:55753340-55753850 chr12:55829940-55831220 chr12:55834960-55836450 chr12:55838750-55840350 chr12:55906640-55907970 chr12:55962860-55963730 chr12:56085390-56086650 chr12:55541650-55543110 chr12:55819690-55820910 chr12:55564000-55568200 chr12:55668800-55670600 chr12:55751600-55757350 chr12:55795800-55796690 chr12:56085000-56086650 chr12:55885100-55887400 chr12:55830400-55830810 chr12:55832400-55836400 chr12:55839160-55840200 chr12:55962850-55963730 chr12:55817400-55820800 chr12:55550760-55552180 chr12:55795870-55796690 chr12:55835600-55836460 chr12:56085680-56086650 chr12:55830320-55831260 chr12:55834360-55835990 chr12:55838400-55840350 chr12:55935870-55936520 chr12:55962410-55962510 chr12:56085710-56086650 chr12:55819620-55820800 chr12:55796310-55796690 chr12:55829970-55831890 chr12:55834240-55836940 chr12:55838380-55840310 chr12:55962940-55963730 chr12:56081000-56081810 chr12:56085040-56086650 chr12:56154390-56155460 chr12:56158440-56160360 chr12:56162180-56162940 chr12:55935720-55936760 chr12:55796270-55796690 chr12:55830150-55831250 chr12:55834420-55836050 chr12:55838900-55840210 chr12:56059900-56060830 chr12:55819640-55820740 chr12:55796260-55796690 chr12:55935800-55936590 chr12:56060650-56061000 chr12:56085130-56086650 chr12:55794490-55796690 chr12:55837860-55840330 chr12:55934660-55937240 chr12:55974900-55979940 chr12:56225700-56229260 chr12:55741320-55745770 chr12:55795640-55796690 chr12:55830360-55831550 chr12:55834280-55835950 chr12:55838340-55840310 chr12:55906640-55907720 chr12:55919800-55922570 chr12:55923080-55924220 chr12:55935650-55937200 chr12:55940720-55941320 chr12:55944840-55946030 chr12:55977840-55978540 chr12:56154390-56156240 chr12:56159310-56160360 chr12:56174430-56175440 chr12:55819440-55820560 chr12:55830010-55831290 chr12:55819630-55820950 chr12:55796180-55796690 chr12:55829920-55831480 chr12:55834770-55836380 chr12:55838290-55840150 chr12:55935520-55936800 chr12:56085540-56086650 chr12:56225700-56226280 chr12:55819410-55820940 chr12:55830080-55831430 chr12:55834240-55836500 chr12:55838340-55840320 chr12:55819560-55820820 chr12:55795830-55796690 chr12:55795570-55796690 chr12:55830080-55831440 chr12:55834570-55836040 chr12:55838280-55840340 chr12:55935740-55936880 chr12:56085520-56086650 chr12:56225700-56225980 chr12:55819480-55820800 chr12:55830320-55831010 chr12:55835420-55835970 chr12:55839340-55840020 chr12:55819730-55820570 chr12:55830100-55830970 chr12:55839210-55839820 chr12:55875100-55876240 chr12:55819960-55820820 chr12:55796020-55796690 chr12:55830080-55831230 chr12:55834960-55836170 chr12:55838920-55840200 chr12:55921390-55922520 chr12:55935840-55936790 chr12:56060560-56061480 chr12:56085690-56086650 chr12:55819780-55820920 chr12:55830080-55831240 chr12:55834370-55836470 chr12:55838710-55840340 chr12:55819680-55820870 chr12:55830080-55831070 chr12:55819840-55820780 chr12:55553900-55556380 chr12:55563710-55566590 chr12:55744180-55745740 chr12:55750990-55757350 chr12:55795250-55796690 chr12:55829780-55833950 chr12:55834170-55836540 chr12:55837990-55840370 chr12:55906640-55908950 chr12:55919380-55921680 chr12:56225700-56226090 chr12:55816880-55821070 chr12:55796330-55796690 chr12:55830210-55831500 chr12:55834740-55836000 chr12:55838360-55840250 chr12:55819490-55820660 chr12:55796350-55796690 chr12:55830060-55833940 chr12:55834140-55840590 chr12:55816970-55820890 chr12:55830080-55831210 chr12:55834610-55836010 chr12:55838720-55840290 chr12:55819670-55820840 chr12:55796140-55796690 chr12:55935790-55936740 chr12:55962990-55963730 chr12:56085430-56086650 chr12:55830110-55831050 chr12:55835290-55836320 chr12:55839070-55840130 chr12:55962890-55963730 chr12:55819820-55820740 chr12:55660640-55661810 chr12:55829980-55831730 chr12:55834220-55838450 chr12:56084930-56086650 chr12:55819500-55820900 chr12:56114070-56116100 chr12:55559780-55562180 chr12:55564330-55565220 chr12:55666860-55670850 chr12:55830100-55831520 chr12:55834180-55836540 chr12:55838390-55840280 chr12:55906650-55907610 chr12:55923820-55924810 chr12:55935760-55936930 chr12:56085160-56086650 chr12:55819370-55820810 chr12:55752840-55753950 chr12:55834290-55836500 chr12:55838500-55840330 chr12:55921120-55922420 chr12:55979760-55980910 chr12:55835480-55835970 chr12:55962980-55963730 chr12:56085760-56086650 chr12:55830020-55831600 chr12:55834590-55836270 chr12:55838610-55840290 chr12:55819480-55820940 chr12:55830000-55831210 chr12:55834960-55836420 chr12:55838640-55840650 chr12:55819670-55820890 chr12:55829920-55831350 chr12:55834520-55836340 chr12:55838720-55840260 chr12:55962880-55963730 chr12:56060250-56061780 chr12:56087020-56087140 chr12:55819620-55820920 chr12:55669340-55670010 chr12:55830040-55831190 chr12:55834970-55836330 chr12:55838680-55840210 chr12:55935790-55936390 chr12:55963240-55963730 chr12:55819600-55820840

Promoter:

chr12:54793662-54797662

 ChIP-seq based regulatory details of Snx6
Sample ID Experiment target Biosample term name Cell type Tissue type Source
 Downstream target genes of Snx6
 Upstream regulatory details of Snx6
 Protein-protein interaction of Snx6
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
Snx6 Git1 Affinity Capture-Western 18523162 10090 10090 BIOGRID
Snx6 Apeh Co-fractionation 32325033 10090 10090 BIOGRID
Snx6 Atg7 Co-fractionation 32325033 10090 10090 BIOGRID
Snx6 Atp1a1 Co-fractionation 32325033 10090 10090 BIOGRID
Snx6 Atp6v1c1 Co-fractionation 32325033 10090 10090 BIOGRID
Snx6 Gtf2a1 Co-fractionation 32325033 10090 10090 BIOGRID
Snx6 Ndel1 Co-fractionation 32325033 10090 10090 BIOGRID
Snx6 Snx1 Co-fractionation 32325033 10090 10090 BIOGRID
Snx6 Snx2 Co-fractionation 32325033 10090 10090 BIOGRID
Snx6 Snx4 Co-fractionation 32325033 10090 10090 BIOGRID
Snx6 Snx5 Co-fractionation 32325033 10090 10090 BIOGRID
Snx6 Tsnax Co-fractionation 32325033 10090 10090 BIOGRID
Snx6 Vps29 Co-fractionation 32325033 10090 10090 BIOGRID
Snx6 Vps35 Co-fractionation 32325033 10090 10090 BIOGRID
Snx6 Ankfy1 Co-fractionation 32325033 10090 10090 BIOGRID
Snx6 Tbc1d5 Co-fractionation 32325033 10090 10090 BIOGRID
 Annotation of Snx6
 Disease information of Snx6