TcoF overview
TcoF: Spen
GeneID: 56381
Name: Msx2-interacting protein
Ensembl: ENSMUSG00000040761
Species: Mouse
Class: NA
Family: Others
Disease: --
Go-trem: 13
Pathway: --
Super Enhancer:

chr4:141506016-141507382 chr4:141496437-141513313 chr4:141500105-141525461 chr4:141506144-141514847 chr4:141496495-141514921 chr4:141500376-141502026 chr4:141524291-141525546 chr4:141505979-141507800 chr4:141506115-141506878 chr4:141524539-141525162 chr4:141505935-141507740 chr4:141505546-141515510 chr4:141477876-141489484 chr4:141505656-141523828 chr4:141505524-141515806 chr4:141505916-141514960 chr4:141506390-141507317 chr4:141505849-141507772 chr4:141500052-141507625 chr4:141492955-141534577 chr4:141505540-141525062 chr4:141506187-141507531 chr4:141500641-141515232 chr4:141506447-141507467 chr4:141505956-141507167 chr4:141505828-141507713 chr4:141514165-141518054 chr4:141506347-141506852 chr4:141506133-141514942 chr4:141506124-141518901 chr4:141506433-141514537

Enhancer:

chr4:140841450-140844720 chr4:141104510-141105200 chr4:141119850-141122600 chr4:141152880-141155760 chr4:141155830-141159200 chr4:141159280-141161830 chr4:141178270-141178350 chr4:141178420-141179190 chr4:141217050-141219770 chr4:141269440-141278970 chr4:141341550-141344800 chr4:141344980-141346500 chr4:141349900-141352340 chr4:140864990-140869650 chr4:141007250-141007460 chr4:141092000-141093090 chr4:141104510-141106430 chr4:141153420-141155760 chr4:141155830-141160020 chr4:141177140-141177290 chr4:141177420-141178110 chr4:141276280-141278970 chr4:141345370-141346500 chr4:141349900-141350620 chr4:141093540-141094070 chr4:141062240-141063290 chr4:141093600-141094070 chr4:141323690-141323800 chr4:141115080-141115700 chr4:140769970-140770230 chr4:141009300-141011980 chr4:141091630-141094070 chr4:141108190-141108900 chr4:141290250-141291880 chr4:141429330-141430470 chr4:140981900-140983220 chr4:141009690-141011920 chr4:141277800-141278970 chr4:141114270-141116230 chr4:140508500-140509980 chr4:141009650-141011380 chr4:141091540-141094070 chr4:141107800-141108860 chr4:141290460-141291420 chr4:141345490-141346500 chr4:141349900-141350220 chr4:141429920-141430470 chr4:140981900-140983310 chr4:141035300-141036660 chr4:141349900-141351720 chr4:140798920-140800730 chr4:140800880-140802080 chr4:140802520-140802860 chr4:140803140-140803290 chr4:140803400-140803460 chr4:140803540-140803760 chr4:140806730-140806850 chr4:140807010-140807870 chr4:140857340-140860100 chr4:140870890-140872500 chr4:140872650-140872780 chr4:140873110-140874390 chr4:140924230-140925160 chr4:140961050-140961180 chr4:140961270-140962040 chr4:140977890-140978410 chr4:140987970-140988580 chr4:141018630-141019180 chr4:141021000-141021260 chr4:141021350-141021430 chr4:141021550-141021630 chr4:141021750-141021890 chr4:141022020-141022260 chr4:141022470-141022580 chr4:141022670-141022750 chr4:141024950-141025290 chr4:141025450-141025730 chr4:141025920-141026020 chr4:141026520-141027050 chr4:141104510-141104900 chr4:141153830-141155760 chr4:141155830-141159180 chr4:141170620-141170850 chr4:141171510-141172110 chr4:141172530-141173200 chr4:141173620-141173810 chr4:141198670-141200770 chr4:141218620-141219770 chr4:141259410-141261840 chr4:141261970-141264130 chr4:141276900-141278970 chr4:141290180-141291900 chr4:141320650-141322390 chr4:141322490-141322570 chr4:141322650-141323620 chr4:141323980-141325760 chr4:141325950-141326750 chr4:141345500-141346500 chr4:141420890-141424690 chr4:141424910-141430470 chr4:140804020-140804900 chr4:140981900-140983150 chr4:141196100-141197330 chr4:140839760-140840390 chr4:140859720-140860530 chr4:140862490-140862960 chr4:141010490-141011040 chr4:141108090-141108900 chr4:141142540-141144170 chr4:141216750-141217230 chr4:141232150-141238220 chr4:141342150-141342480 chr4:141345540-141346500 chr4:141425190-141426900 chr4:141429680-141430470 chr4:140981900-140983020 chr4:141115080-141115460 chr4:141212010-141212470 chr4:141062310-141062680 chr4:141108390-141108760 chr4:141269440-141269940 chr4:141533140-141533760 chr4:141549320-141550620 chr4:141633920-141634260 chr4:140704090-140705140 chr4:141093930-141094070 chr4:141006240-141012750 chr4:141091450-141094070 chr4:141106800-141111180 chr4:141206460-141217870 chr4:141269440-141273300 chr4:140981900-140984940 chr4:140837000-140842140 chr4:140842450-140844050 chr4:140846270-140847130 chr4:140857340-140860730 chr4:140888240-140890260 chr4:140893230-140899040 chr4:141119080-141124530 chr4:141124600-141130250 chr4:141154620-141155760 chr4:141234600-141235850 chr4:141091480-141093450 chr4:141121110-141122300 chr4:141125460-141126630 chr4:141154180-141155760 chr4:141155830-141156080 chr4:140718030-140723620 chr4:140801750-140802080 chr4:140842420-140847130 chr4:140857340-140862420 chr4:140862490-140864310 chr4:140864990-140872500 chr4:140893520-140898030 chr4:141093570-141094070 chr4:141107520-141109010 chr4:141151860-141155760 chr4:141155830-141160700 chr4:141230130-141239470 chr4:141278400-141278970 chr4:141290700-141291480 chr4:141349900-141350290 chr4:141420980-141424450 chr4:141428890-141430470 chr4:141547880-141551830 chr4:140885290-140887080 chr4:140981900-140984220 chr4:140836690-140842230 chr4:140842270-140847130 chr4:140864990-140871500 chr4:140885290-140892970 chr4:141019320-141019580 chr4:141019710-141020150 chr4:141020610-141020700 chr4:141091640-141094070 chr4:141120060-141123450 chr4:141153620-141155760 chr4:141155830-141158100 chr4:141177920-141178110 chr4:141182620-141183660 chr4:141183780-141183860 chr4:141184040-141184190 chr4:141184350-141184990 chr4:141233230-141235510 chr4:140799570-140800730 chr4:140802640-140802860 chr4:140890460-140892380 chr4:141154310-141155760 chr4:141155830-141156100 chr4:141453690-141455090 chr4:141455160-141459400 chr4:141093260-141094070 chr4:141154560-141155760 chr4:141155830-141156050 chr4:141278900-141278970 chr4:141290450-141291630 chr4:141092090-141094070 chr4:140628550-140629420 chr4:140712810-140720230 chr4:141218480-141219770 chr4:141305190-141305480 chr4:141313480-141314250 chr4:141314330-141314910 chr4:141315170-141317230 chr4:141324190-141325760 chr4:141325950-141326820 chr4:141349900-141350610 chr4:141424870-141430470 chr4:140623520-140624100 chr4:141006150-141008220 chr4:141090690-141094070 chr4:141107490-141109670 chr4:141269440-141272790 chr4:141305690-141309600 chr4:141314030-141314250 chr4:141315170-141317910 chr4:141325080-141325760 chr4:141345210-141346500 chr4:141349900-141351800 chr4:141326950-141329190 chr4:141107980-141108880 chr4:141346200-141346500 chr4:141114500-141115700 chr4:141211660-141212780 chr4:140857340-140859170 chr4:140890600-140891970 chr4:140978540-140979790 chr4:141154220-141155760 chr4:141155830-141156820 chr4:141455480-141456950 chr4:140864990-140870630 chr4:140981900-140984710 chr4:140731610-140733330 chr4:140798920-140799170 chr4:140807010-140807480 chr4:140815820-140816510 chr4:140857340-140860110 chr4:140869250-140872500 chr4:140905230-140910360 chr4:140924230-140924470 chr4:140991390-140991900 chr4:141013750-141014620 chr4:141069650-141071000 chr4:141078300-141080340 chr4:141080430-141081450 chr4:141137010-141137400 chr4:141155830-141161830 chr4:141173380-141173550 chr4:141183350-141183660 chr4:141193390-141193620 chr4:141197410-141197900 chr4:141198000-141198320 chr4:141198430-141198560 chr4:141198670-141200620 chr4:141200930-141211320 chr4:141218350-141219770 chr4:141260260-141261840 chr4:141275920-141278970 chr4:141289950-141291900 chr4:141305130-141305480 chr4:141322210-141322390 chr4:141323980-141324650 chr4:141349900-141350580 chr4:141420780-141424680 chr4:141455160-141457200 chr4:141196450-141197330 chr4:141211390-141213830 chr4:140857340-140857980 chr4:141346310-141346500 chr4:140800110-140800730 chr4:140801800-140802080 chr4:140844000-140844630 chr4:140862490-140863070 chr4:140890560-140892540 chr4:140938120-140938240 chr4:140938420-140938650 chr4:141013970-141014910 chr4:141154560-141155460 chr4:141156250-141156750 chr4:141455160-141459250 chr4:140804020-140804090 chr4:140981900-140982060 chr4:141093590-141094070 chr4:141114030-141115400 chr4:140885290-140892760 chr4:140893150-140898020 chr4:140989370-140991900 chr4:141068240-141072750 chr4:141133850-141135060 chr4:141230030-141239470 chr4:140981900-140984820 chr4:140863600-140864310 chr4:140902660-140905070 chr4:140908300-140910390 chr4:140936610-140938240 chr4:140938760-140939300 chr4:140945030-140945230 chr4:140945440-140945990 chr4:140953580-140953860 chr4:140954010-140954570 chr4:140963930-140964220 chr4:140964330-140964490 chr4:140969430-140969790 chr4:140969920-140970350 chr4:140970480-140971110 chr4:140971210-140971860 chr4:140988400-140988580 chr4:141007660-141009540 chr4:141069910-141070950 chr4:141117890-141118790 chr4:141153930-141155760 chr4:141155830-141159360 chr4:141159680-141161830 chr4:141277480-141278970 chr4:141290230-141291480 chr4:141342680-141343380 chr4:141345640-141346500 chr4:141349900-141350410 chr4:140836860-140838880 chr4:140981900-140983230 chr4:141196810-141197330 chr4:141069200-141072400 chr4:141150800-141151130 chr4:141155830-141158600 chr4:141218200-141219770 chr4:141289330-141292580 chr4:141339020-141340600 chr4:141340660-141344800 chr4:141415790-141416460 chr4:141416590-141417710 chr4:141417860-141430470 chr4:141448400-141450200 chr4:140862490-140863600 chr4:140888200-140892720 chr4:141093180-141094070 chr4:141104510-141106000 chr4:140804020-140804200 chr4:140864990-140870600 chr4:141013790-141015320 chr4:141093520-141094070 chr4:141107680-141108720 chr4:141153870-141155760 chr4:141155830-141156680 chr4:141270270-141271790 chr4:141278700-141278970 chr4:141345530-141346500 chr4:141349900-141350200 chr4:141114160-141115000 chr4:141091920-141094070 chr4:141108190-141108870 chr4:141155830-141156560 chr4:141091530-141094070 chr4:141319800-141320380 chr4:141322160-141322390 chr4:141345340-141346500 chr4:141349900-141350420 chr4:141326950-141329050 chr4:140800040-140800730 chr4:140800880-140801500 chr4:140815460-140816730 chr4:140842520-140844180 chr4:140893520-140895210 chr4:140977890-140978150 chr4:141153580-141155760 chr4:141155830-141156580 chr4:141159340-141161730 chr4:141199020-141200600 chr4:141218860-141219770 chr4:141290230-141291500 chr4:141306780-141309370 chr4:141321900-141322390 chr4:141324510-141325760 chr4:141345390-141346500 chr4:141349900-141350530 chr4:141422180-141424460 chr4:141455160-141456820 chr4:140865150-140869370 chr4:141124880-141126660 chr4:141269850-141271500 chr4:141114070-141116140 chr4:140816060-140816630 chr4:140829920-140830680 chr4:140832960-140835820 chr4:140842450-140843960 chr4:140857340-140859150 chr4:140871060-140872500 chr4:140903280-140904830 chr4:140909420-140910280 chr4:140938760-140938930 chr4:141014160-141014690 chr4:141069460-141071060 chr4:141080580-141081090 chr4:141121050-141121850 chr4:141153210-141155760 chr4:141155830-141156800 chr4:141270620-141271660 chr4:141276350-141278970 chr4:141290540-141291080 chr4:141345620-141346500 chr4:141349900-141350590 chr4:140836960-140839020 chr4:140981900-140982460 chr4:141211710-141212480 chr4:140814990-140816890 chr4:140832360-140841090 chr4:140841190-140844750 chr4:140885290-140896740 chr4:141120200-141122530 chr4:141159970-141161830 chr4:141306330-141309620 chr4:141341440-141344800 chr4:140981900-140984840 chr4:141108150-141108970 chr4:141134620-141135250 chr4:141244140-141245180 chr4:141269440-141271400 chr4:141315170-141315650 chr4:141324350-141325760 chr4:141325950-141326430 chr4:141345130-141346500 chr4:141349900-141350500 chr4:141430120-141430470 chr4:140866000-140871140 chr4:141327350-141328220 chr4:141093620-141094070 chr4:141161240-141161830 chr4:141198670-141200560 chr4:141274590-141278970 chr4:141321660-141322390 chr4:141345400-141346500 chr4:141455160-141459760 chr4:141154380-141155760 chr4:141155830-141156130 chr4:141218550-141219770 chr4:141290110-141291700 chr4:141345600-141346500 chr4:141349900-141350700 chr4:140981900-140983700 chr4:141009750-141011290 chr4:141290420-141291430 chr4:140847020-140847130 chr4:140862490-140863180 chr4:140864990-140871210 chr4:141010390-141011280 chr4:141121170-141121840 chr4:141155830-141156700 chr4:141204250-141206060 chr4:141349900-141350300 chr4:141426610-141429850 chr4:140977890-140978300 chr4:141199370-141199880 chr4:141425400-141428690 chr4:140862490-140863890 chr4:140842340-140844430 chr4:140857340-140859210 chr4:140871110-140872470 chr4:141009770-141011870 chr4:141158740-141161830 chr4:141264370-141265690 chr4:141275470-141278970 chr4:141321590-141322390 chr4:140836540-140839000 chr4:140865190-140869580 chr4:140885930-140886300 chr4:140981900-140983650 chr4:141210900-141213120 chr4:141125480-141130050 chr4:141154340-141155760 chr4:140801670-140802080 chr4:140802520-140802650 chr4:140862490-140863150 chr4:141108300-141108700 chr4:141321870-141322390 chr4:141322650-141323200 chr4:140837260-140838580 chr4:141211680-141213030 chr4:140731600-140733500 chr4:140815410-140817160 chr4:140864990-140871070 chr4:140903280-140904710 chr4:140908470-140910400 chr4:140988310-140988580 chr4:141013100-141017680 chr4:141063940-141072680 chr4:141093530-141094070 chr4:141269440-141273320 chr4:141321540-141322390 chr4:141416020-141416460 chr4:141417860-141424680 chr4:141424740-141430470 chr4:140836030-140838970 chr4:140800880-140801630 chr4:140815960-140816260 chr4:140842620-140843290 chr4:141290670-141291150 chr4:140982210-140983530 chr4:141172800-141173200 chr4:141215040-141217570 chr4:141010310-141011240 chr4:141142620-141143960 chr4:141290660-141291220 chr4:141345920-141346500 chr4:140800880-140801640 chr4:140816010-140816650 chr4:140829820-140831480 chr4:140842520-140844040 chr4:140857340-140859090 chr4:140887740-140888610 chr4:140893640-140895060 chr4:140909040-140910410 chr4:141013640-141016060 chr4:141069480-141070880 chr4:141121010-141121760 chr4:141134840-141135220 chr4:141153710-141155760 chr4:141155830-141156940 chr4:141159650-141160790 chr4:141178980-141179190 chr4:141199100-141200330 chr4:141219030-141219770 chr4:141277410-141278970 chr4:141290160-141291520 chr4:141322000-141322390 chr4:141345560-141346500 chr4:141349900-141350430 chr4:141456340-141456770 chr4:140804400-140804900 chr4:140837380-140837720 chr4:140981900-140983590 chr4:140977890-140977970 chr4:141216630-141217590 chr4:140857340-140860600 chr4:140971240-140971610 chr4:141321810-141322390 chr4:141322650-141323170 chr4:141345230-141346500 chr4:141349900-141351670 chr4:140857340-140858750 chr4:141009260-141012420 chr4:141092390-141094070 chr4:141290550-141291500 chr4:141425090-141426910 chr4:140981900-140982470 chr4:141009760-141011830 chr4:141093980-141094070 chr4:141108210-141108870 chr4:141278560-141278970 chr4:141349900-141350100 chr4:141104510-141106220 chr4:141160380-141160970 chr4:141345860-141346500 chr4:140981900-140982590 chr4:140718690-140723620 chr4:140832710-140842270 chr4:140842550-140847130 chr4:140857340-140859400 chr4:140859780-140862420 chr4:140862490-140863250 chr4:140893650-140896900 chr4:140908840-140910420 chr4:141118880-141124700 chr4:141155830-141159350 chr4:141173050-141173200 chr4:141233530-141235340 chr4:141422430-141424440 chr4:140981900-140983420 chr4:141093490-141094070 chr4:141121030-141121730 chr4:141125540-141126620 chr4:140981900-140983710 chr4:140834010-140835930 chr4:140839840-140840410 chr4:140842640-140843360 chr4:140857340-140857470 chr4:140894720-140895280 chr4:140909820-140910230 chr4:141062260-141062650 chr4:141092240-141093200 chr4:141108300-141108690 chr4:141121820-141122550 chr4:141125770-141126570 chr4:141153920-141155760 chr4:141155830-141156190 chr4:141234930-141235290 chr4:141290660-141291270 chr4:141346330-141346500 chr4:141349900-141350030 chr4:140837540-140839010 chr4:140983440-140983700 chr4:141115120-141115760

Promoter:

chr4:141536597-141540597

 ChIP-seq based regulatory details of Spen
Sample ID Experiment target Biosample term name Cell type Tissue type Source
TcoF_01_22158 Spen None None testes Cistrome
TcoF_01_22157 Spen MIN None testes Cistrome
TcoF_01_22156 Spen MIN None testes Cistrome
TcoF_01_22155 Spen MIN None testes Cistrome
TcoF_01_22154 Spen MIN None testes Cistrome
TcoF_01_22153 Spen MIN None testes Cistrome
TcoF_01_22152 Spen None None testes Cistrome
TcoF_01_22151 Spen None Spermatocyte testes Cistrome
TcoF_01_22150 Spen MIN Spermatocyte testes Cistrome
TcoF_01_22149 Spen MIN Spermatocyte testes Cistrome
TcoF_01_22148 Spen MIN None testes Cistrome
TcoF_01_22147 Spen MIN None testes Cistrome
TcoF_01_22146 Spen MIN None testes Cistrome
TcoF_01_22145 Spen MIN None testes Cistrome
TcoF_01_22144 Spen MIN None testes Cistrome
TcoF_01_22143 Spen MIN Spermatocyte testes Cistrome
 Downstream target genes of Spen
 Upstream regulatory details of Spen
 Protein-protein interaction of Spen
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
Spen Bcas2 Co-fractionation 32325033 10090 10090 BIOGRID
Spen Cactin Co-fractionation 32325033 10090 10090 BIOGRID
Spen Cdc5l Co-fractionation 32325033 10090 10090 BIOGRID
Spen Cwc15 Co-fractionation 32325033 10090 10090 BIOGRID
Spen Cwc22 Co-fractionation 32325033 10090 10090 BIOGRID
Spen Ddx41 Co-fractionation 32325033 10090 10090 BIOGRID
Spen Htatsf1 Co-fractionation 32325033 10090 10090 BIOGRID
Spen Ik Co-fractionation 32325033 10090 10090 BIOGRID
Spen Ppwd1 Co-fractionation 32325033 10090 10090 BIOGRID
Spen Prpf18 Co-fractionation 32325033 10090 10090 BIOGRID
Spen Prpf3 Co-fractionation 32325033 10090 10090 BIOGRID
Spen Prpf40a Co-fractionation 32325033 10090 10090 BIOGRID
Spen Prpf8 Co-fractionation 32325033 10090 10090 BIOGRID
Spen Sf3a3 Co-fractionation 32325033 10090 10090 BIOGRID
Spen Snrnp27 Co-fractionation 32325033 10090 10090 BIOGRID
Spen Snrnp40 Co-fractionation 32325033 10090 10090 BIOGRID
Spen Srrm2 Co-fractionation 32325033 10090 10090 BIOGRID
Spen Srsf7 Co-fractionation 32325033 10090 10090 BIOGRID
Spen Tfip11 Co-fractionation 32325033 10090 10090 BIOGRID
Spen Thoc1 Co-fractionation 32325033 10090 10090 BIOGRID
 Annotation of Spen
 Disease information of Spen