TcoF overview
TcoF: Ss18
GeneID: 268996
Name: Protein SSXT
Ensembl: ENSMUSG00000037013
Species: Mouse
Class: class 2
Family: SS18
Disease: --
Go-trem: 13
Pathway: --
Super Enhancer:

chr18:14647572-14657786 chr18:14570009-14570959 chr18:14656368-14658353 chr18:14654723-14658381 chr18:14570109-14573668 chr18:14647681-14650675 chr18:14505451-14506099 chr18:14641964-14678419 chr18:14511089-14511742 chr18:14459310-14460447 chr18:14502523-14503295 chr18:14653401-14657780 chr18:14664307-14678411 chr18:14591410-14593073 chr18:14650874-14651747 chr18:14591204-14593811 chr18:14674524-14677702 chr18:14647558-14648110 chr18:14653546-14657750 chr18:14459425-14461129 chr18:14502589-14503313 chr18:14502616-14504102 chr18:14656390-14657832 chr18:14656508-14657773 chr18:14653621-14655331 chr18:14654736-14670027 chr18:14613225-14614301 chr18:14647631-14658394 chr18:14647547-14658497 chr18:14603255-14604821 chr18:14569976-14570429 chr18:14526308-14526931 chr18:14602898-14605006 chr18:14647548-14648277 chr18:14458759-14460096 chr18:14502482-14503511 chr18:14647582-14648325 chr18:14656213-14669448 chr18:14511227-14512546 chr18:14592121-14600641 chr18:14674271-14677268 chr18:14647535-14648146 chr18:14511980-14512544 chr18:14647726-14647985 chr18:14647576-14648102 chr18:14647550-14647986 chr18:14481280-14482101 chr18:14458663-14459815 chr18:14526181-14526909

Enhancer:

chr18:14838050-14841170 chr18:14942440-14943680 chr18:14806150-14806580 chr18:14840500-14841170 chr18:15072150-15072640 chr18:14840680-14841170 chr18:14840410-14841170 chr18:14806160-14806570 chr18:14811700-14813530 chr18:14813680-14819280 chr18:14824180-14827150 chr18:14839010-14841170 chr18:14761630-14763360 chr18:14942440-14943090 chr18:14825300-14826420 chr18:14840180-14841170 chr18:14839730-14841170 chr18:14942440-14943100 chr18:14806140-14806700 chr18:14811780-14813530 chr18:14813680-14818080 chr18:14826210-14828810 chr18:14832990-14834610 chr18:14839560-14841170 chr18:14761230-14763730 chr18:14942440-14943150 chr18:14839630-14841170 chr18:14942440-14943180 chr18:14730930-14732110 chr18:14839460-14841170 chr18:14942440-14942900 chr18:14812200-14812720 chr18:14814790-14816810 chr18:14833620-14836100 chr18:14839240-14841170 chr18:15210630-15211890 chr18:14942440-14943060 chr18:14812270-14812650 chr18:14815160-14815880 chr18:14942440-14942790 chr18:14838250-14841170 chr18:14749840-14752510 chr18:14806180-14806490 chr18:14832250-14836150 chr18:14840520-14841170 chr18:14864840-14865550 chr18:14750470-14751520 chr18:14806220-14806500 chr18:14864840-14865130 chr18:14806030-14806890 chr18:14840150-14841170 chr18:14942440-14942890 chr18:14806190-14806570 chr18:14840170-14841170 chr18:14840030-14841170 chr18:15002970-15004870 chr18:14839520-14841170 chr18:15002410-15002920 chr18:15002970-15004160 chr18:14814870-14817680 chr18:14839350-14841170 chr18:14942440-14942760 chr18:14814930-14816080 chr18:14942440-14942680 chr18:14814900-14816370 chr18:15172500-15175080 chr18:15179400-15181060 chr18:14840630-14841170 chr18:14731220-14731870 chr18:14811750-14813530 chr18:14813680-14817360 chr18:14839580-14841170 chr18:15159310-15159720 chr18:14942440-14942870 chr18:14840770-14841170 chr18:14478360-14479430 chr18:14617830-14618480 chr18:14840270-14841170 chr18:14840550-14841170 chr18:14824920-14828810 chr18:14828900-14837890 chr18:14837970-14841170 chr18:14942440-14943520 chr18:14800440-14801150 chr18:14840130-14841170 chr18:14942440-14942740 chr18:14839840-14841170 chr18:14942440-14943000 chr18:14840670-14841170 chr18:14489490-14490810 chr18:14662400-14663320 chr18:14840230-14841170 chr18:15002400-15002920 chr18:15003390-15004740 chr18:15179000-15180700 chr18:15219420-15220270 chr18:15222370-15225210 chr18:14942440-14942660 chr18:14840190-14841170 chr18:15002510-15002920 chr18:15002970-15004270 chr18:15173050-15174140 chr18:14840210-14841170 chr18:14814910-14817180 chr18:14840080-14841170 chr18:14815290-14816200 chr18:15000720-15002920 chr18:14812010-14812740 chr18:14838870-14841170 chr18:14942440-14943470 chr18:14814920-14816740 chr18:14812260-14813530 chr18:14813680-14814580 chr18:14942440-14942960 chr18:14806200-14806510 chr18:14811910-14813530 chr18:14814580-14816720 chr18:14832940-14834560 chr18:14762010-14763970 chr18:14812290-14813530 chr18:14813680-14814800 chr18:14840160-14841170 chr18:14814680-14816860 chr18:14942440-14942710 chr18:14806190-14806520 chr18:15147190-15147500 chr18:15147890-15147980 chr18:15222090-15225760 chr18:14942440-14943500 chr18:14806160-14806610 chr18:14942440-14943480 chr18:14815140-14816270 chr18:14840240-14841170 chr18:14761910-14763080 chr18:14942440-14942570 chr18:15147240-15147500 chr18:14942440-14942600 chr18:14840470-14841170 chr18:14684710-14685150 chr18:14840370-14841170 chr18:14864840-14865430 chr18:14806160-14806580 chr18:14811950-14813530 chr18:14813680-14819120 chr18:14825480-14826180 chr18:14840200-14841170 chr18:14761440-14762470 chr18:14825570-14826060 chr18:14840130-14840600 chr18:14762020-14763360 chr18:14813200-14813530 chr18:14814960-14816270 chr18:14806130-14806590 chr18:14841030-14841170 chr18:15147610-15147800 chr18:15148130-15148240 chr18:14750660-14751490 chr18:14832820-14834490 chr18:14840620-14841170 chr18:14750840-14751180 chr18:14806130-14806600 chr18:14864840-14865020

Promoter:

chr18:14680914-14684914

 ChIP-seq based regulatory details of Ss18
Sample ID Experiment target Biosample term name Cell type Tissue type Source
TcoF_01_20627 Ss18 ZhBTc4 Embryonic Stem Cell Embryo Cistrome
TcoF_01_20626 Ss18 ZhBTc4 Embryonic Stem Cell Embryo Cistrome
TcoF_01_20625 Ss18 ZhBTc4 Embryonic Stem Cell Embryo Cistrome
TcoF_01_20624 Ss18 ZhBTc4 Embryonic Stem Cell Embryo Cistrome
TcoF_01_20623 Ss18 ZhBTc4 Embryonic Stem Cell Embryo Cistrome
TcoF_01_20622 Ss18 ZhBTc4 Embryonic Stem Cell Embryo Cistrome
TcoF_01_20046 Ss18 C2C12 Myoblast Muscle Cistrome
 Downstream target genes of Ss18
 Upstream regulatory details of Ss18
 Protein-protein interaction of Ss18
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
Ss18 Atf2 Affinity Capture-Western 22439931 10090 10090 BIOGRID
Ss18 Tle1 Affinity Capture-Western 22439931 10090 10090 BIOGRID
Ss18 Hdac1 Affinity Capture-Western 22439931 10090 10090 BIOGRID
Ss18 Ezh2 Affinity Capture-Western 22439931 10090 10090 BIOGRID
 Annotation of Ss18
 Disease information of Ss18