TcoF overview
| TcoF: | Tbp | |
| GeneID: | 21374 | |
| Name: | TATA-box-binding protein | |
| Ensembl: | ENSMUSG00000014767 | |
| Species: | Mouse | |
| Class: | NA | |
| Family: | TATA-box | |
| Disease: | -- | |
| Go-trem: | 37 | |
| Pathway: | 46 | |
| Super Enhancer: | chr17:15509997-15512029 chr17:15504348-15504801 |
|
| Enhancer: |
chr17:15501420-15504100 chr17:15560040-15561230 chr17:15660680-15662230 chr17:15663570-15663950 chr17:15662360-15663330 chr17:15568010-15568220 chr17:15663810-15663950 chr17:15842470-15843900 chr17:15663850-15663950 chr17:15842270-15843220 chr17:15317260-15317730 chr17:15332000-15332490 chr17:15344270-15346140 chr17:15460050-15460750 chr17:15480030-15480690 chr17:15577170-15578280 chr17:15962340-15962970 chr17:15842270-15842690 chr17:15842270-15843900 chr17:15581190-15583090 chr17:15584660-15585840 chr17:15813140-15816790 chr17:15821840-15824710 chr17:15842500-15843900 chr17:15878600-15879120 chr17:15478740-15482160 chr17:15662880-15663330 chr17:15842270-15843710 chr17:15343890-15346330 chr17:15479540-15481490 chr17:15511920-15512150 chr17:15576690-15580160 chr17:15663100-15663330 chr17:15314320-15315050 chr17:15567390-15568540 chr17:15577060-15577720 chr17:15952760-15954380 chr17:15567470-15568540 chr17:15842270-15843320 chr17:15844730-15848340 chr17:15343530-15346260 chr17:15479520-15481100 chr17:15663780-15663950 chr17:15774670-15777100 chr17:15813810-15815760 chr17:15842270-15843170 chr17:15728210-15728850 chr17:15342750-15346420 chr17:15774860-15777100 chr17:15813440-15816780 chr17:15962330-15962970 chr17:15842270-15843430 chr17:15479630-15480570 chr17:15576700-15578650 chr17:15576700-15578940 chr17:15842270-15843260 chr17:15844100-15846950 chr17:15663190-15663330 chr17:15571510-15572460 chr17:15576790-15577940 chr17:15343600-15346050 chr17:15663770-15663950 chr17:15944760-15947680 chr17:15421540-15423210 chr17:15562480-15563150 chr17:15563230-15563330 chr17:15566960-15567210 chr17:15603880-15605140 chr17:15714270-15714610 chr17:15479980-15480840 chr17:15576900-15578400 chr17:15663840-15663950 chr17:15342420-15347130 chr17:15421300-15423760 chr17:15204800-15207400 chr17:15713890-15719200 chr17:15793400-15795200 chr17:15724270-15729000 chr17:15478800-15481200 chr17:15224780-15226740 chr17:15245150-15246540 chr17:15576650-15578670 chr17:15663730-15663950 chr17:15944760-15947540 chr17:15962440-15962970 chr17:15793860-15794930 chr17:15842270-15843380 chr17:15421700-15423140 chr17:15577200-15578460 chr17:15663860-15663950 chr17:15663680-15663950 chr17:15714160-15714650 chr17:15157580-15158870 chr17:15175710-15178250 chr17:15244970-15247120 chr17:15501770-15504230 chr17:15646580-15649900 chr17:15955620-15957630 chr17:15958140-15962970 chr17:15289390-15289970 chr17:15659870-15662230 chr17:15844100-15845220 chr17:15874250-15875320 chr17:15877850-15879120 chr17:15662360-15663000 chr17:15576500-15578170 chr17:15844100-15844520 chr17:15842480-15843900 chr17:15316350-15318240 chr17:15331480-15332600 chr17:15335860-15337190 chr17:15344430-15346150 chr17:15421590-15423370 chr17:15479920-15480780 chr17:15566950-15568270 chr17:15586130-15587140 chr17:15663660-15663950 chr17:15945110-15947800 chr17:15962260-15962970 chr17:15842270-15843370 chr17:15336410-15336810 chr17:15878340-15879120 chr17:15794040-15794790 chr17:15329240-15331150 chr17:15844100-15846960 chr17:15944760-15955660 chr17:15955960-15957630 chr17:15958140-15961970 chr17:15962320-15962970 chr17:15842520-15843900 chr17:15962390-15962970 chr17:15842270-15843300 chr17:15663240-15663330 chr17:15714340-15714610 chr17:15956540-15957460 chr17:15960260-15962970 chr17:15107550-15115510 chr17:15115860-15116460 chr17:15116630-15117220 chr17:15117360-15118530 chr17:15118640-15119260 chr17:15119350-15120150 chr17:15122870-15123680 chr17:15123790-15124550 chr17:15124660-15125030 chr17:15125060-15125860 chr17:15132910-15136100 chr17:15136260-15138940 chr17:15139150-15146800 chr17:15147230-15147830 chr17:15148000-15148590 chr17:15148730-15149910 chr17:15150010-15150630 chr17:15150720-15151560 chr17:15152240-15153150 chr17:15153250-15154100 chr17:15156430-15157220 chr17:15157290-15158870 chr17:15167620-15170310 chr17:15962900-15962970 chr17:15121870-15122730 chr17:15155160-15155920 chr17:15842270-15843790 chr17:15957530-15957630 chr17:15958140-15959820 chr17:15663210-15663330 chr17:15663800-15663950 chr17:15584670-15585370 chr17:15814840-15816620 chr17:15842270-15843310 chr17:15663160-15663330 chr17:15321480-15323080 chr17:15343270-15346300 chr17:15814800-15815270 chr17:15560070-15560870 chr17:15842530-15843360 chr17:15344960-15345940 chr17:15480070-15480620 chr17:15577600-15578210 chr17:15714290-15714590 chr17:15842270-15842830 |
|
| Promoter: |
chr17:15497887-15501887 |
ChIP-seq based regulatory details of Tbp
| Sample ID | Experiment target | Biosample term name | Cell type | Tissue type | Source |
|---|---|---|---|---|---|
| TcoF_01_22190 | Tbp | None | None | Testis | Cistrome |
| TcoF_01_22189 | Tbp | None | None | Testis | Cistrome |
| TcoF_01_22188 | Tbp | None | Embryonic Stem Cell | None | Cistrome |
| TcoF_01_22187 | Tbp | None | Embryonic Stem Cell | None | Cistrome |
| TcoF_01_22186 | Tbp | None | Embryoid Bodies | None | Cistrome |
| TcoF_01_22185 | Tbp | None | Embryoid Bodies | None | Cistrome |
| TcoF_01_22184 | Tbp | None | Epithelium | Liver | Cistrome |
| TcoF_01_22183 | Tbp | None | Epithelium | Liver | Cistrome |
| TcoF_01_22182 | Tbp | MEL | Erythroid Progenitor Cell | None | Cistrome |
| TcoF_01_22181 | Tbp | CH12 | Lymphoblastoid | Blood | Cistrome |
| TcoF_01_22180 | Tbp | TSC | Trophoblast Stem Cell | Embryo | Cistrome |
| TcoF_01_22179 | Tbp | 10T1/2 | Fibroblast | Embryo | Cistrome |
| TcoF_01_22178 | Tbp | 10T1/2 | Fibroblast | Embryo | Cistrome |
| TcoF_01_22177 | Tbp | V6.5 | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_22176 | Tbp | V6.5 | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_22175 | Tbp | V6.5 | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_22174 | Tbp | None | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_22173 | Tbp | Raw 264.7 | Macrophage | None | Cistrome |
Downstream target genes of Tbp
Protein-protein interaction of Tbp
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| Tbp | Taf13 | Two-hybrid | 20211142 | 10090 | 10090 | BIOGRID |
| Tbp | Sp3 | Affinity Capture-Western | 21149256 | 10090 | 10090 | BIOGRID |
| Tbp | Sp3 | Reconstituted Complex | 21149256 | 10090 | 10090 | BIOGRID |
| Tbp | Nfya | Affinity Capture-Western | 21705419 | 10090 | 10090 | BIOGRID |
| Tbp | Taf6 | Affinity Capture-Western | 17242199 | 10090 | 10090 | BIOGRID |
| Tbp | Taf7 | Affinity Capture-Western | 17242199 | 10090 | 10090 | BIOGRID |
| Tbp | Taf7l | Affinity Capture-Western | 17242199 | 10090 | 10090 | BIOGRID |
| Tbp | Taf1a | Affinity Capture-Western | 9050847 | 10090 | 10090 | BIOGRID |
| Tbp | Taf1b | Affinity Capture-Western | 9050847 | 10090 | 10090 | BIOGRID |
| Tbp | Taf1c | Affinity Capture-Western | 9050847 | 10090 | 10090 | BIOGRID |
| Tbp | TAF1A | Affinity Capture-Western | 9050847 | 10090 | 9606 | BIOGRID |
| Tbp | TAF1B | Affinity Capture-Western | 9050847 | 10090 | 9606 | BIOGRID |
| Tbp | TAF1C | Affinity Capture-Western | 9050847 | 10090 | 9606 | BIOGRID |
| Tbp | Naca | Affinity Capture-Western | 9488445 | 10090 | 10090 | BIOGRID |
| Tbp | Cand2 | Affinity Capture-Western | 10441524 | 10090 | 10116 | BIOGRID |
| Tbp | Gtf2b | Affinity Capture-Western | 8414971 | 10090 | 10090 | BIOGRID |
| Tbp | Gtf2b | Co-purification | 8414971 | 10090 | 10090 | BIOGRID |
| Tbp | Pias3 | Two-hybrid | 16522640 | 10090 | 10090 | BIOGRID |
| Tbp | Gtf2a1 | Two-hybrid | 16522640 | 10090 | 10090 | BIOGRID |
| Tbp | Pias1 | Affinity Capture-Western | 16522640 | 10090 | 10090 | BIOGRID |
| Tbp | Pias3 | Affinity Capture-Western | 16522640 | 10090 | 10090 | BIOGRID |
| Tbp | Gtf2a1 | Affinity Capture-Western | 16522640 | 10090 | 10090 | BIOGRID |
| Tbp | Zfp523 | Affinity Capture-Western | 16522640 | 10090 | 10090 | BIOGRID |
| Tbp | Pias1 | Reconstituted Complex | 16522640 | 10090 | 10090 | BIOGRID |
| Tbp | Taf5 | Affinity Capture-Western | 7744009 | 10090 | 10090 | BIOGRID |
| Tbp | Taf10 | Affinity Capture-Western | 7744009 | 10090 | 10090 | BIOGRID |
Annotation of Tbp
Expression of Tbp
Disease information of Tbp