TcoF overview
TcoF: ATN1
GeneID: 54828
Name: Atrophin-1
Ensembl: ENSG00000111676
Species: Human
Class: class HC
Family: Others
Disease: 9
Go term: 13
Pathway: --
Hallmark: --
Super Enhancer:

chr12:7033455-7037208 chr12:7033366-7048016 chr12:7033387-7039582 chr12:7032988-7039701 chr12:7033301-7047997 chr12:7033265-7048219 chr12:7033440-7048224 chr12:7033581-7048110 chr12:7033291-7048082 chr12:7033320-7047928 chr12:7033147-7048045 chr12:7033045-7048406 chr12:7032984-7048097 chr12:7033404-7038976 chr12:7033396-7038467 chr12:7033600-7048108 chr12:7033442-7048282 chr12:7033309-7039355 chr12:7033105-7048738 chr12:7033356-7048108 chr12:7033577-7048433 chr12:7032972-7050548 chr12:7033052-7048299 chr12:7032924-7041386 chr12:7033060-7048890 chr12:7033114-7040206 chr12:7032972-7048923 chr12:7032910-7039718 chr12:7033372-7038711 chr12:7032879-7038452 chr12:7033437-7048088 chr12:7033184-7047974 chr12:7033412-7048074 chr12:7033493-7048549 chr12:7033663-7048258 chr12:7033522-7048012 chr12:7033649-7047759 chr12:7033805-7047615 chr12:7033290-7048124 chr12:7033018-7039790 chr12:7033487-7052961 chr12:7033619-7047764 chr12:7033459-7048058 chr12:7033673-7047271 chr12:7033221-7048592 chr12:7032870-7040602 chr12:7032941-7039469 chr12:7033563-7048244 chr12:7033161-7049080 chr12:7033498-7048907 chr12:7032935-7048096 chr12:7033456-7038946 chr12:7033041-7040666 chr12:7032964-7049430 chr12:7033642-7048068 chr12:7033281-7048501 chr12:7033633-7047794 chr12:7022532-7049285 chr12:7022633-7048421 chr12:7025194-7054963 chr12:7022710-7048623 chr12:7022500-7047636 chr12:7021759-7048350 chr12:7022443-7048381 chr12:7021818-7048235 chr12:7032827-7055624 chr12:7032846-7039615 chr12:7033586-7055682 chr12:7032855-7040703 chr12:7032652-7051025 chr12:7033003-7054825 chr12:7032851-7050162 chr12:7032820-7040854 chr12:7032455-7048137 chr12:7032524-7038906 chr12:7032485-7038658 chr12:7032334-7038481 chr12:7028142-7048296 chr12:7033164-7053669 chr12:7025703-7047649 chr12:7025597-7038877 chr12:7033556-7055623 chr12:7032965-7055230 chr12:7033132-7055281 chr12:7032962-7055621 chr12:7032747-7039549 chr12:7033569-7055656 chr12:7033403-7055569 chr12:7032592-7038994 chr12:7032894-7055545 chr12:7032592-7038994 chr12:7033016-7054769

Enhancer:

chr12:6982160-6982370 chr12:6345440-6346920 chr12:6422950-6424170 chr12:6435740-6436410 chr12:6644640-6645650 chr12:6645760-6645840 chr12:6645960-6646080 chr12:6646380-6646470 chr12:6646560-6646740 chr12:6647160-6647260 chr12:6647540-6648690 chr12:6649760-6650670 chr12:6677090-6677300 chr12:6688080-6690200 chr12:6752840-6753300 chr12:6753770-6754380 chr12:6778360-6779920 chr12:6797390-6798260 chr12:6826920-6827900 chr12:6861530-6862040 chr12:6875920-6876670 chr12:6924160-6924890 chr12:6925570-6925960 chr12:6938100-6939020 chr12:6943210-6945020 chr12:6970270-6970600 chr12:6970780-6971580 chr12:6977670-6978020 chr12:6978350-6978420 chr12:6978560-6978850 chr12:6978940-6979210 chr12:6980480-6981400 chr12:7016610-7018610 chr12:7023820-7024980 chr12:7046720-7047010 chr12:7047230-7047600 chr12:7060680-7060770 chr12:7073360-7074510 chr12:7091940-7092590 chr12:7092700-7094250 chr12:7168180-7169050 chr12:7189410-7191690 chr12:7261540-7261700 chr12:7438450-7440900 chr12:6861220-6861450 chr12:6931070-6932540 chr12:7014240-7014740 chr12:7026880-7027100 chr12:6806960-6807210 chr12:7088740-7090160 chr12:7090340-7090750 chr12:7261080-7261260 chr12:6172220-6173410 chr12:6440090-6442230 chr12:6493850-6494180 chr12:6494310-6494390 chr12:6570100-6571190 chr12:6620420-6621460 chr12:6658020-6658640 chr12:6658650-6658920 chr12:6659060-6659860 chr12:6659960-6660100 chr12:6660170-6660560 chr12:6675980-6676980 chr12:6750300-6752700 chr12:6755740-6755950 chr12:6756180-6756480 chr12:6807270-6809300 chr12:6953140-6954740 chr12:7043740-7044700 chr12:7188610-7189330 chr12:6568110-6570020 chr12:6425570-6426460 chr12:6426860-6427020 chr12:6427160-6427460 chr12:6439230-6439430 chr12:6439460-6439760 chr12:6493620-6493750 chr12:6554400-6554580 chr12:6554720-6556120 chr12:6632170-6632420 chr12:6632510-6634740 chr12:6696730-6696870 chr12:6697120-6697460 chr12:6805690-6806450 chr12:6921340-6923300 chr12:7067240-7067860 chr12:6427590-6427910 chr12:6566910-6567810 chr12:6631200-6631990 chr12:6635540-6635610 chr12:6635780-6636050 chr12:6636230-6636940 chr12:6699340-6700630 chr12:6950510-6950740 chr12:6950780-6952130 chr12:7130840-7132570 chr12:6471410-6472600 chr12:7219620-7220120 chr12:7242090-7242180 chr12:7242330-7242650 chr12:7374400-7375680 chr12:7410790-7412120 chr12:7459340-7460950 chr12:7175840-7177150 chr12:6824590-6826340 chr12:6884030-6884430 chr12:6969840-6970110 chr12:6755460-6755640 chr12:6770550-6772230 chr12:6887090-6887400 chr12:6939180-6939510 chr12:7025080-7025580 chr12:7037550-7039800 chr12:7103600-7105220 chr12:7120490-7120900 chr12:7123160-7125570 chr12:7175080-7175750 chr12:7286590-7287700 chr12:7343170-7343480 chr12:7343510-7343820 chr12:6635370-6635450 chr12:6781700-6782380 chr12:6646180-6646260 chr12:6900760-6902980 chr12:6979300-6979420 chr12:7086910-7087500 chr12:7087670-7087760 chr12:7087850-7088630 chr12:7095760-7097510 chr12:7174420-7174940 chr12:7242840-7244040 chr12:6574110-6575000 chr12:7244280-7244980 chr12:6638020-6638110 chr12:7090790-7090970 chr12:6442310-6442530 chr12:7060900-7061140 chr12:7043480-7043620 chr12:7064430-7064530 chr12:7064650-7064820 chr12:7064920-7065300 chr12:7065380-7065580 chr12:7065730-7066810 chr12:7066950-7067080 chr12:6839990-6840160 chr12:6978150-6978260 chr12:6422350-6422790 chr12:7064160-7064310 chr12:6672680-6672770 chr12:6575170-6575390 chr12:6408460-6410060 chr12:6739080-6740750 chr12:6833980-6835180 chr12:6853830-6855940 chr12:6884720-6886420 chr12:6882080-6882140 chr12:6464600-6464940 chr12:6506970-6508400 chr12:6619980-6620270 chr12:6700750-6700850 chr12:6703820-6704100 chr12:6817660-6818890 chr12:6827950-6828140 chr12:6941080-6942750 chr12:6942800-6942900 chr12:6942970-6943080 chr12:6952690-6952790 chr12:6952860-6952940 chr12:6700990-6701080 chr12:6919280-6920420 chr12:6437110-6437300 chr12:6954970-6955880 chr12:6180500-6181490 chr12:6494550-6495230 chr12:7091070-7091830 chr12:7276770-7277220 chr12:7274450-7276270 chr12:6401720-6402730 chr12:6406390-6407730 chr12:6442680-6442900 chr12:6443030-6443250 chr12:6472880-6475140 chr12:6478910-6479530 chr12:6538820-6541280 chr12:6657330-6657590 chr12:7026270-7026740 chr12:7043190-7043330 chr12:7182910-7184270 chr12:7185020-7187510 chr12:7521560-7521950 chr12:7522260-7523520 chr12:7651780-7652550 chr12:7585570-7585930 chr12:7649730-7651460 chr12:7311530-7312250 chr12:7314220-7315920 chr12:6735360-6737260 chr12:6898830-6899240 chr12:7040000-7040520 chr12:7144280-7145560 chr12:7145950-7147550 chr12:7307570-7309650 chr12:6171950-6172110 chr12:6196900-6199160 chr12:6309730-6312050 chr12:6312120-6313540 chr12:6327220-6328190 chr12:6342650-6344390 chr12:6344490-6344640 chr12:6344730-6345350 chr12:6347440-6348450 chr12:6350180-6351900 chr12:6424340-6424710 chr12:6426580-6426710 chr12:6428040-6428150 chr12:6796100-6797330 chr12:6860840-6861090 chr12:6994950-6995730 chr12:7074880-7074940 chr12:6650810-6652780 chr12:6995900-6997300 chr12:6140740-6142240 chr12:6166240-6167010 chr12:6181610-6182780 chr12:6548840-6549050 chr12:6697850-6698490 chr12:6917510-6917850 chr12:7432100-7434180 chr12:6230500-6232300 chr12:6341900-6342570 chr12:6626670-6626760 chr12:7676650-7678670 chr12:7970630-7972070 chr12:6732570-6733320 chr12:6859470-6859870 chr12:6859930-6860800 chr12:7303660-7303980 chr12:6468950-6471210 chr12:6500790-6502180 chr12:6502940-6504150 chr12:6850780-6853090 chr12:7062220-7063750 chr12:6476310-6478770 chr12:6607470-6609350 chr12:6612320-6614390 chr12:6638210-6638570 chr12:6657710-6657830 chr12:6709180-6709380 chr12:6710930-6711120 chr12:6711340-6711540 chr12:6786350-6787260 chr12:6835670-6836240 chr12:6886680-6886950 chr12:6899580-6900400 chr12:6952240-6952330 chr12:6952400-6952520 chr12:6765960-6768180 chr12:7173940-7174340 chr12:7253770-7254200 chr12:7254680-7255250 chr12:7041120-7043000 chr12:6496500-6497560 chr12:7271840-7272090 chr12:7272140-7273100 chr12:7273670-7274300 chr12:7277330-7277630 chr12:7290660-7290840 chr12:6497670-6497960 chr12:6497990-6498800 chr12:6707590-6708930 chr12:6709560-6709690 chr12:7086420-7086520 chr12:7086690-7086750

Promoter:

chr12:7033626-7051484

 ChIP-seq based regulatory details of ATN1
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
 Downstream target genes of ATN1
 Protein-protein interaction of ATN1
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
ATN1 KAT7 Two-hybrid 16169070 9606 9606 BIOGRID
ATN1 TLE1 Two-hybrid 16169070 9606 9606 BIOGRID
ATN1 VIM Two-hybrid 16169070 9606 9606 BIOGRID
ATN1 RERE Reconstituted Complex 10814707 9606 9606 BIOGRID
ATN1 BAIAP2 Two-hybrid 10332026 9606 9606 BIOGRID
ATN1 CTNND2 Two-hybrid 10332026 9606 9606 BIOGRID
ATN1 DVL1 Two-hybrid 10332026 9606 9606 BIOGRID
ATN1 BAIAP2 Affinity Capture-Western 10332026 9606 9606 BIOGRID
ATN1 MAGI2 Two-hybrid 9647693 9606 9606 BIOGRID
ATN1 ITCH Two-hybrid 9647693 9606 9606 BIOGRID
ATN1 WWP2 Two-hybrid 9647693 9606 9606 BIOGRID
ATN1 WWP1 Two-hybrid 9647693 9606 9606 BIOGRID
ATN1 MAGI1 Two-hybrid 9647693 9606 9606 BIOGRID
ATN1 NR2E1 Reconstituted Complex 16481466 9606 9606 BIOGRID
ATN1 RUNX1T1 Two-hybrid 10973986 9606 9606 BIOGRID
ATN1 RUNX1T1 Affinity Capture-Western 10973986 9606 9606 BIOGRID
ATN1 BAIAP2 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 RUNX1T1 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 EWSR1 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 GCC1 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 KRTAP4-12 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 LENG8 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 MDFI Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 CRACR2A Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 NCK2 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 RHOXF2 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 PLSCR1 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 PSME3 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 RBPMS Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 TRIP6 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 WDR5 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 WWP2 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 AGRN Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 ATN1 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 BAG6 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 CACNB1 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 CBFA2T2 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 CENPJ Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 CHRD Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 CRIP2 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 DVL2 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 EFEMP1 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 EFEMP2 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 MEGF6 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 MEGF8 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 FBLN1 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 GAPDH Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 GRN Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 HSPG2 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 JAG2 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 SSPO Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 LTBP1 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 LTBP4 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 MBP Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 MEGF11 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 NELL1 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 NELL2 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 GIGYF1 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 PFKL Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 RCHY1 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 SLIT1 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 STXBP4 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 SYVN1 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 TEP1 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 ZMYND8 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 RBM10 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 ALG13 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 FBLN5 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 LRP2 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 PCSK5 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 PSMA3 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 WWP1 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 AES Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 ARF3 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 PRRC2A Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 NOC2L Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 DMPK Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 ECM1 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 FBLN2 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 MAP7D1 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 PRRC2B Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 ZSWIM8 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 KRT31 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 KAT6A Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 KAT6B Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 RBFOX2 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 RERE Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 RNF31 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 SIAH1 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 SIAH2 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 SPAG5 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 RAD54L2 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 USP54 Two-hybrid 16713569 9606 9606 BIOGRID
ATN1 RHOXF2 Affinity Capture-Western 16713569 9606 9606 BIOGRID
ATN1 TRIP6 Affinity Capture-Western 16713569 9606 9606 BIOGRID
ATN1 SIAH1 Two-hybrid 21988832 9606 9606 BIOGRID
ATN1 TEKT3 Two-hybrid 32296183 9606 9606 BIOGRID
ATN1 PIN1 Two-hybrid 32296183 9606 9606 BIOGRID
ATN1 DGCR6L Two-hybrid 32296183 9606 9606 BIOGRID
ATN1 ETNK2 Two-hybrid 32296183 9606 9606 BIOGRID
ATN1 TNFAIP8 Two-hybrid 32296183 9606 9606 BIOGRID
ATN1 SLC25A48 Two-hybrid 32296183 9606 9606 BIOGRID
ATN1 P4HA3 Two-hybrid 32296183 9606 9606 BIOGRID
ATN1 BAG3 Two-hybrid 32296183 9606 9606 BIOGRID
ATN1 SH3RF1 Two-hybrid 32296183 9606 9606 BIOGRID
ATN1 PPP1R32 Two-hybrid 32296183 9606 9606 BIOGRID
ATN1 PITX2 Two-hybrid 32296183 9606 9606 BIOGRID
ATN1 ZNF503 Two-hybrid 32296183 9606 9606 BIOGRID
ATN1 LENG8 Two-hybrid 32296183 9606 9606 BIOGRID
ATN1 HNRNPF Two-hybrid 32296183 9606 9606 BIOGRID
ATN1 RBM4B Two-hybrid 32296183 9606 9606 BIOGRID
ATN1 OLIG3 Two-hybrid 32296183 9606 9606 BIOGRID
ATN1 SS18L1 Two-hybrid 32296183 9606 9606 BIOGRID
ATN1 HGS Two-hybrid 32296183 9606 9606 BIOGRID
ATN1 KRTAP6-2 Two-hybrid 32296183 9606 9606 BIOGRID
ATN1 KRTAP19-2 Two-hybrid 32296183 9606 9606 BIOGRID
ATN1 KRTAP15-1 Two-hybrid 32296183 9606 9606 BIOGRID
ATN1 KRTAP19-5 Two-hybrid 32296183 9606 9606 BIOGRID
ATN1 KRTAP9-3 Two-hybrid 32296183 9606 9606 BIOGRID
ATN1 KRTAP12-2 Two-hybrid 32296183 9606 9606 BIOGRID
ATN1 RBM14 Two-hybrid 32296183 9606 9606 BIOGRID
ATN1 CSRP2BP Affinity Capture-MS 24981860 9606 9606 BIOGRID
ATN1 CXXC1 Affinity Capture-MS 24981860 9606 9606 BIOGRID
ATN1 Act5C Reconstituted Complex 16481466 9606 7227 BIOGRID
ATN1 svp Reconstituted Complex 16481466 9606 7227 BIOGRID
 Annotation of ATN1
 TCGA cancer survival map of ATN1


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  ATN1