TcoF overview
| TcoF: | CNOT1 | |
| GeneID: | 8048 | |
| Name: | CCR4-NOT transcription complex subunit 1 | |
| Ensembl: | ENSG00000125107 | |
| Species: | Human | |
| Class: | class 1 | |
| Family: | CCR4-NOT | |
| Disease: | 0 | |
| Go term: | 29 | |
| Pathway: | 2 | |
| Hallmark: | 1 | |
| Super Enhancer: |
chr16:58660961-58665028 chr16:58661161-58664995 chr16:58661493-58686947 chr16:58661152-58665143 |
|
| Enhancer: |
chr16:58426690-58429000 chr16:58433710-58434930 chr16:58534170-58534890 chr16:58549470-58549690 chr16:58718080-58718620 chr16:58636740-58639100 chr16:58756180-58756780 chr16:58230750-58231530 chr16:58269470-58271560 chr16:58284020-58285380 chr16:58455420-58457550 chr16:58458970-58461400 chr16:58526590-58527280 chr16:58527960-58528860 chr16:58550250-58550380 chr16:58765740-58768040 chr16:58743470-58743680 chr16:58328120-58328790 chr16:58528910-58529050 chr16:58550580-58550710 chr16:58550830-58551950 chr16:58552140-58552300 chr16:58248710-58250760 chr16:58364300-58366000 chr16:58861980-58863420 chr16:58895400-58897840 chr16:58866840-58867380 chr16:58993740-58995360 chr16:58899980-58901680 chr16:58540520-58540810 chr16:58540920-58541710 chr16:58541900-58542860 chr16:58542910-58543050 chr16:58543090-58543200 chr16:58543260-58544380 chr16:58541770-58541850 chr16:58648100-58649040 chr16:58255510-58257330 chr16:58716780-58717850 chr16:58297920-58300190 chr16:58484500-58486400 chr16:58550000-58550100 chr16:58080800-58082330 chr16:58603190-58603750 chr16:58703900-58704010 chr16:58704070-58704640 chr16:57734180-57735840 chr16:58892580-58894910 chr16:58442500-58444300 chr16:58467170-58468690 chr16:58686270-58687370 chr16:58843630-58844150 chr16:59076100-59076720 chr16:58243220-58245180 chr16:58644390-58645800 chr16:58652610-58653480 chr16:58660010-58660270 chr16:58698460-58700100 chr16:58399290-58400840 chr16:58537810-58538050 chr16:58538180-58538260 chr16:58538330-58538490 |
|
| Promoter: |
chr16:58553855-58663789 |
ChIP-seq based regulatory details of CNOT1
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|
Downstream target genes of CNOT1
Upstream regulatory details of CNOT1
Protein-protein interaction of CNOT1
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| CNOT1 | CNOT2 | Two-hybrid | 10637334 | 9606 | 9606 | BIOGRID |
| CNOT1 | CNOT4 | Two-hybrid | 10637334 | 9606 | 9606 | BIOGRID |
| CNOT1 | CNOT8 | Two-hybrid | 10637334 | 9606 | 9606 | BIOGRID |
| CNOT1 | CNOT4 | Two-hybrid | 11823428 | 9606 | 9606 | BIOGRID |
| CNOT1 | CNOT3 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| CNOT1 | RQCD1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| CNOT1 | POLR1C | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| CNOT1 | CNOT2 | Affinity Capture-Western | 16778766 | 9606 | 9606 | BIOGRID |
| CNOT1 | CNOT3 | Affinity Capture-Western | 16778766 | 9606 | 9606 | BIOGRID |
| CNOT1 | CNOT8 | Affinity Capture-Western | 16778766 | 9606 | 9606 | BIOGRID |
| CNOT1 | RXRA | Two-hybrid | 16778766 | 9606 | 9606 | BIOGRID |
| CNOT1 | TNRC6C | Affinity Capture-Western | 21981923 | 9606 | 9606 | BIOGRID |
| CNOT1 | TNRC6A | Affinity Capture-Western | 23172285 | 9606 | 9606 | BIOGRID |
| CNOT1 | CNOT7 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| CNOT1 | ABCF1 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | ATRX | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | CAPZA1 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | CAPZA2 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | CAPZB | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | FHL2 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | CNOT2 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | CNOT3 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | RPS27 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | SDCBP | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | UBTF | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | RQCD1 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | CNOT8 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | TOB1 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | TOB2 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | BTG3 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | NUPL2 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | CNOT10 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | IBTK | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | SND1 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | AFF4 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | CNOT7 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | AURKAIP1 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | PI4K2A | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | CNOT11 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | CNOT6 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | GPBP1L1 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | RNF219 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | INTS5 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | TNKS1BP1 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | RAVER1 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | CNOT6L | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CNOT1 | RQCD1 | Co-crystal Structure | 24768540 | 9606 | 9606 | BIOGRID |
| CNOT1 | DDX6 | Co-crystal Structure | 24768540 | 9606 | 9606 | BIOGRID |
| CNOT1 | RQCD1 | Affinity Capture-Western | 24768540 | 9606 | 9606 | BIOGRID |
| CNOT1 | TNRC6A | Reconstituted Complex | 24768540 | 9606 | 9606 | BIOGRID |
| CNOT1 | DDX6 | Affinity Capture-Western | 24768540 | 9606 | 9606 | BIOGRID |
| CNOT1 | DDX6 | Reconstituted Complex | 24768540 | 9606 | 9606 | BIOGRID |
| CNOT1 | CNOT6 | Affinity Capture-MS | 27173435 | 9606 | 9606 | BIOGRID |
| CNOT1 | CTNNBL1 | Positive Genetic | 30033366 | 9606 | 9606 | BIOGRID |
| CNOT1 | CTNNBL1 | Negative Genetic | 30033366 | 9606 | 9606 | BIOGRID |
| CNOT1 | GFI1B | Positive Genetic | 30033366 | 9606 | 9606 | BIOGRID |
| CNOT1 | LEO1 | Negative Genetic | 30033366 | 9606 | 9606 | BIOGRID |
| CNOT1 | MAX | Positive Genetic | 30033366 | 9606 | 9606 | BIOGRID |
| CNOT1 | MED28 | Positive Genetic | 30033366 | 9606 | 9606 | BIOGRID |
| CNOT1 | PDRG1 | Negative Genetic | 30033366 | 9606 | 9606 | BIOGRID |
| CNOT1 | PSMD12 | Positive Genetic | 30033366 | 9606 | 9606 | BIOGRID |
| CNOT1 | PSPH | Negative Genetic | 30033366 | 9606 | 9606 | BIOGRID |
| CNOT1 | SNAPC1 | Positive Genetic | 30033366 | 9606 | 9606 | BIOGRID |
| CNOT1 | TIMM22 | Positive Genetic | 30033366 | 9606 | 9606 | BIOGRID |
| CNOT1 | UBA2 | Positive Genetic | 30033366 | 9606 | 9606 | BIOGRID |
| CNOT1 | ZNF598 | Positive Genetic | 30033366 | 9606 | 9606 | BIOGRID |
| CNOT1 | POLR2A | Affinity Capture-Western | 29802328 | 9606 | 9606 | BIOGRID |
| CNOT1 | TNRC6A | Affinity Capture-Western | 28813667 | 9606 | 9606 | BIOGRID |
| CNOT1 | MCM2 | Negative Genetic | 28481362 | 9606 | 9606 | BIOGRID |
| CNOT1 | CNOT10 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| CNOT1 | CNOT11 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| CNOT1 | CNOT3 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| CNOT1 | RQCD1 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| CNOT1 | FAM193A | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| CNOT1 | GPBP1 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| CNOT1 | GPBP1L1 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| CNOT1 | CNOT7 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| CNOT1 | TUBB3 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| CNOT1 | CNOT2 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| CNOT1 | TXNL1 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| CNOT1 | MOT2 | Two-hybrid | 11823428 | 9606 | 559292 | BIOGRID |
| CNOT1 | Esr1 | Two-hybrid | 16778766 | 9606 | 10090 | BIOGRID |
Annotation of CNOT1
TCGA cancer survival map of CNOT1
Expression of CNOT1
Disease information of CNOT1