TcoF overview
| TcoF: | DDX17 | |
| GeneID: | 1609 | |
| Name: | Probable ATP-dependent RNA helicase DDX17 | |
| Ensembl: | ENSG00000100201 | |
| Species: | Human | |
| Class: | class HC | |
| Family: | RNA helicase | |
| Disease: | 0 | |
| Go term: | 27 | |
| Pathway: | 2 | |
| Hallmark: | -- | |
| Super Enhancer: |
chr22:38899974-38903922 chr22:38896945-38903921 chr22:38898333-38904100 chr22:38899701-38903960 chr22:38899744-38904100 chr22:38899895-38904089 chr22:38900108-38903578 chr22:38898330-38905030 chr22:38899755-38903811 chr22:38885980-38903809 chr22:38886531-38903739 chr22:38886502-38904087 chr22:38885875-38903823 chr22:38885776-38904144 chr22:38885888-38904087 chr22:38899624-38903999 chr22:38900030-38910218 chr22:38899507-38903580 chr22:38898176-38903894 chr22:38900305-38903649 chr22:38900023-38913705 chr22:38900742-38905221 chr22:38900308-38904343 chr22:38900411-38905766 chr22:38899522-38903885 chr22:38874840-38904066 chr22:38875045-38906634 chr22:38870010-38903948 chr22:38873388-38903641 |
|
| Enhancer: |
chr22:38302580-38304980 chr22:38391890-38392820 chr22:38392910-38393210 chr22:38531090-38532420 chr22:38792050-38794440 chr22:38899590-38901950 chr22:38599090-38601520 chr22:38802210-38803180 chr22:39078100-39078320 chr22:38799930-38800470 chr22:38890140-38890630 chr22:38890810-38890890 chr22:39177020-39178660 chr22:39144790-39145770 chr22:39148670-39150640 chr22:39150710-39151270 chr22:39267550-39267690 chr22:39267760-39267900 chr22:39267950-39268120 chr22:39378480-39380070 chr22:39388780-39388940 chr22:39389010-39389950 chr22:39410380-39411590 chr22:39417540-39418820 chr22:39436980-39438940 chr22:39439100-39440080 chr22:39473380-39474930 chr22:38944640-38945920 chr22:39475090-39476930 chr22:39496430-39497240 chr22:38982200-38983220 chr22:39117870-39118790 chr22:38327940-38328550 chr22:38389930-38391410 chr22:38453600-38453750 chr22:38453860-38455240 chr22:38463780-38465030 chr22:38466900-38467680 chr22:38563260-38565220 chr22:38575640-38577670 chr22:38617720-38620050 chr22:38642110-38642790 chr22:38642890-38643770 chr22:38694940-38695890 chr22:38710740-38713160 chr22:38849110-38850980 chr22:39187720-39190070 chr22:39227160-39227690 chr22:39235040-39237350 chr22:39238620-39239230 chr22:39328680-39329380 chr22:39329950-39331970 chr22:39332540-39333090 chr22:38824300-38825160 chr22:38825250-38826170 chr22:38626750-38627240 chr22:38696960-38698860 chr22:39147040-39147210 chr22:39129590-39130710 chr22:38687940-38689260 chr22:38689330-38690110 chr22:38918790-38919460 chr22:38927110-38928940 chr22:38984160-38985630 chr22:39078450-39078880 chr22:39421010-39421070 chr22:39445590-39448070 chr22:39459500-39460920 chr22:39461630-39463530 chr22:39509290-39511640 chr22:39543310-39545790 chr22:38787770-38789410 chr22:39506370-39507790 chr22:38765810-38766540 chr22:39017380-39018930 chr22:39039260-39041560 chr22:39135430-39135720 chr22:39145860-39146220 chr22:39175620-39176930 chr22:39380240-39381810 chr22:39388160-39388400 chr22:39448360-39448580 chr22:39134270-39134590 chr22:39134760-39134870 chr22:39134990-39135340 chr22:39135950-39136270 chr22:39136440-39137010 chr22:39137050-39137490 chr22:38696070-38696720 chr22:39001350-39003390 chr22:38411860-38414300 chr22:38503920-38504260 chr22:38609900-38610420 chr22:38612860-38615290 chr22:38638170-38640480 chr22:38652560-38654410 chr22:38886600-38887220 chr22:39178880-39180490 chr22:38305460-38307950 chr22:38730560-38732610 chr22:38071720-38072990 chr22:38073070-38074480 chr22:38286250-38288520 chr22:38628750-38629740 chr22:38630240-38630500 chr22:38630550-38630890 chr22:38685100-38686690 chr22:39125090-39125460 chr22:38288550-38290440 chr22:38631780-38633910 chr22:38477690-38477890 chr22:38484170-38484750 chr22:38484970-38485100 chr22:38485240-38485520 chr22:38539300-38541440 chr22:38541660-38542360 chr22:38732710-38734780 chr22:38962740-38963580 chr22:38963630-38964210 chr22:38504350-38505130 chr22:38505220-38506480 chr22:38516090-38516760 chr22:38549580-38550970 chr22:38561930-38562260 chr22:38628080-38628680 chr22:38877640-38878500 chr22:38501990-38503850 chr22:38831180-38831490 chr22:39104960-39107210 chr22:38520190-38521560 chr22:38521770-38522370 chr22:38897900-38898400 chr22:38827300-38828240 chr22:38838570-38839970 chr22:38397700-38399830 chr22:38513060-38513690 chr22:38664380-38665350 chr22:38864330-38866120 chr22:38868120-38870520 chr22:38873460-38874300 chr22:39143000-39144710 chr22:38019640-38020970 chr22:38039800-38040430 chr22:38082480-38083920 chr22:38168770-38169240 chr22:38308000-38308350 chr22:38313800-38315040 chr22:38366660-38368310 chr22:38374140-38374870 chr22:38425900-38426870 chr22:38437920-38439980 chr22:38522460-38524270 chr22:38538960-38539110 chr22:38746600-38747710 chr22:39181130-39183200 chr22:38748000-38750350 chr22:38493190-38494060 chr22:38779260-38779640 chr22:38811000-38812610 chr22:38462770-38463710 chr22:39146390-39146900 chr22:39137580-39138300 chr22:38334780-38336710 |
|
| Promoter: |
chr22:38879443-38903665 |
ChIP-seq based regulatory details of DDX17
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|
Downstream target genes of DDX17
Upstream regulatory details of DDX17
Protein-protein interaction of DDX17
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| DDX17 | WBP11 | Two-hybrid | 16189514 | 9606 | 9606 | BIOGRID |
| DDX17 | LNX1 | Two-hybrid | 16189514 | 9606 | 9606 | BIOGRID |
| DDX17 | HDAC1 | Affinity Capture-Western | 15298701 | 9606 | 9606 | BIOGRID |
| DDX17 | SNRNP70 | Co-purification | 12193588 | 9606 | 9606 | BIOGRID |
| DDX17 | KAT2B | Affinity Capture-Western | 17226766 | 9606 | 9606 | BIOGRID |
| DDX17 | EP300 | Affinity Capture-Western | 17226766 | 9606 | 9606 | BIOGRID |
| DDX17 | CREBBP | Reconstituted Complex | 17226766 | 9606 | 9606 | BIOGRID |
| DDX17 | EP300 | Reconstituted Complex | 17226766 | 9606 | 9606 | BIOGRID |
| DDX17 | ESR1 | Affinity Capture-Western | 19995069 | 9606 | 9606 | BIOGRID |
| DDX17 | EP300 | Affinity Capture-Western | 19995069 | 9606 | 9606 | BIOGRID |
| DDX17 | DDX5 | Affinity Capture-Western | 19995069 | 9606 | 9606 | BIOGRID |
| DDX17 | DDX17 | Affinity Capture-Western | 19995069 | 9606 | 9606 | BIOGRID |
| DDX17 | HDAC1 | Affinity Capture-Western | 19995069 | 9606 | 9606 | BIOGRID |
| DDX17 | HDAC2 | Affinity Capture-Western | 19995069 | 9606 | 9606 | BIOGRID |
| DDX17 | HDAC3 | Affinity Capture-Western | 19995069 | 9606 | 9606 | BIOGRID |
| DDX17 | APP | Reconstituted Complex | 21832049 | 9606 | 9606 | BIOGRID |
| DDX17 | DDX5 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX17 | DHX9 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX17 | SRSF1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX17 | EFTUD2 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX17 | SRSF3 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX17 | SF3A1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX17 | ADAR | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX17 | RANBP2 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX17 | EIF5A | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX17 | SF3B4 | Two-hybrid | 22365833 | 9606 | 9606 | BIOGRID |
| DDX17 | U2AF2 | Two-hybrid | 22365833 | 9606 | 9606 | BIOGRID |
| DDX17 | SF1 | Two-hybrid | 22365833 | 9606 | 9606 | BIOGRID |
| DDX17 | WBP11 | Two-hybrid | 22365833 | 9606 | 9606 | BIOGRID |
| DDX17 | DDX17 | Two-hybrid | 22365833 | 9606 | 9606 | BIOGRID |
| DDX17 | DDX5 | Two-hybrid | 22365833 | 9606 | 9606 | BIOGRID |
| DDX17 | HNRNPK | Two-hybrid | 22365833 | 9606 | 9606 | BIOGRID |
| DDX17 | RBM4 | Two-hybrid | 22365833 | 9606 | 9606 | BIOGRID |
| DDX17 | HNRNPH3 | Two-hybrid | 22365833 | 9606 | 9606 | BIOGRID |
| DDX17 | LSM1 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| DDX17 | PRPSAP1 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| DDX17 | RBM15 | Two-hybrid | 25416956 | 9606 | 9606 | BIOGRID |
| DDX17 | EP300 | Affinity Capture-Western | 20663877 | 9606 | 9606 | BIOGRID |
| DDX17 | ESR1 | Affinity Capture-Western | 20663877 | 9606 | 9606 | BIOGRID |
| DDX17 | ATXN2 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| DDX17 | ATXN2L | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| DDX17 | CPSF6 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| DDX17 | HNRNPL | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| DDX17 | ILK | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| DDX17 | NOSIP | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| DDX17 | PARVA | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| DDX17 | PLEC | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| DDX17 | PROSC | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| DDX17 | QARS | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| DDX17 | SFPQ | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| DDX17 | SMARCC2 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| DDX17 | YLPM1 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| DDX17 | FNBP4 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| DDX17 | IGHA2 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| DDX17 | AMY1C | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| DDX17 | DDX5 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| DDX17 | IGHA1 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| DDX17 | NIF3L1 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| DDX17 | AMPD2 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| DDX17 | PPP1R7 | Affinity Capture-MS | 27173435 | 9606 | 9606 | BIOGRID |
| DDX17 | RBM14 | Two-hybrid | 30217970 | 9606 | 9606 | BIOGRID |
| DDX17 | SNRPC | Affinity Capture-Western | 29884807 | 9606 | 9606 | BIOGRID |
| DDX17 | ERCC6 | Affinity Capture-Western | 26030138 | 9606 | 9606 | BIOGRID |
| DDX17 | PTK6 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| DDX17 | DDX6 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| DDX17 | BYSL | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| DDX17 | GAS8 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| DDX17 | HNRNPH1 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| DDX17 | RBM10 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| DDX17 | MGC50722 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| DDX17 | RBM28 | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
| DDX17 | DDX5 | Synthetic Growth Defect | 32463358 | 9606 | 9606 | BIOGRID |
Annotation of DDX17
TCGA cancer survival map of DDX17
Expression of DDX17
Disease information of DDX17