TcoF overview
| TcoF: | GTF2B | |
| GeneID: | 3020 | |
| Name: | Transcription initiation factor IIB | |
| Ensembl: | ENSG00000137947 | |
| Species: | Human | |
| Class: | class 2 | |
| Family: | GTF | |
| Disease: | 1 | |
| Go term: | 33 | |
| Pathway: | 11 | |
| Hallmark: | -- | |
| Super Enhancer: |
-- |
|
| Enhancer: |
chr1:89523920-89524520 chr1:89524730-89524990 chr1:89525110-89525870 chr1:89486430-89488360 chr1:89528940-89530840 chr1:89274240-89275790 chr1:89286270-89287620 chr1:89085790-89086180 chr1:89150310-89150840 chr1:89271700-89272660 chr1:89294740-89295620 chr1:89463900-89465550 chr1:89465700-89467950 chr1:89482740-89483830 chr1:89599140-89599490 chr1:89657810-89658360 chr1:89854410-89856660 chr1:89407210-89407920 chr1:89259150-89261620 chr1:89021100-89022580 chr1:89362940-89364610 chr1:89500540-89501700 chr1:89589060-89591540 chr1:89752270-89753410 chr1:89195960-89196180 chr1:89196520-89198000 chr1:89375020-89376960 chr1:89506030-89507610 chr1:89510790-89511410 chr1:89511500-89512830 chr1:89513360-89513830 chr1:89112810-89113320 chr1:89228400-89230800 chr1:89203130-89203600 chr1:89238880-89241060 chr1:89128500-89130040 chr1:89566450-89567500 chr1:89494770-89495130 |
|
| Promoter: |
chr1:89318316-89357627 |
ChIP-seq based regulatory details of GTF2B
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|---|---|---|---|---|---|
| TcoF_00_40186 | GTF2B | cell line | LCL | - | Blood | ReMap |
| TcoF_00_20524 | GTF2B | cell line | HeLa | GSM1846783 | Uterus | Cistrome |
| TcoF_00_40942 | GTF2B | cell line | HeLa_ASYNC | GSM1846783 | Uterus | ReMap |
| TcoF_00_20525 | GTF2B | cell line | HeLa | GSM1846785 | Uterus | Cistrome |
| TcoF_00_20526 | GTF2B | cell line | HeLa | GSM1846786 | Uterus | Cistrome |
| TcoF_00_20527 | GTF2B | cell line | HeLa | GSM1846787 | Uterus | Cistrome |
| TcoF_00_20528 | GTF2B | cell line | HeLa | GSM1846803 | Uterus | Cistrome |
| TcoF_00_20529 | GTF2B | cell line | HeLa | GSM1846807 | Uterus | Cistrome |
| TcoF_00_40943 | GTF2B | cell line | HeLa_G2M | GSM1846807 | Uterus | ReMap |
| TcoF_00_20717 | GTF2B | cell line | K562 | GSM2041442 | Bone Marrow | Cistrome |
| TcoF_00_20716 | GTF2B | cell line | K562 | GSM2041443 | Bone Marrow | Cistrome |
| TcoF_00_20715 | GTF2B | cell line | K562 | GSM2041444 | Bone Marrow | Cistrome |
| TcoF_00_20714 | GTF2B | cell line | K562 | GSM2041449 | Bone Marrow | Cistrome |
| TcoF_00_20057 | GTF2B | cell line | K562 | GSM935394 | Bone Marrow | Cistrome |
| TcoF_00_40418 | GTF2B | cell line | K-562 | GSM935394 | Bone Marrow | ReMap |
| TcoF_00_20633 | GTF2B | cell line | IMR90 | GSM938410 | Lung | Cistrome |
| TcoF_00_40710 | GTF2B | cell line | IMR-90_TERT | GSM938410 | Lung | ReMap |
Downstream target genes of GTF2B
Upstream regulatory details of GTF2B
Protein-protein interaction of GTF2B
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| GTF2B | TBP | Co-purification | 9159119 | 9606 | 9606 | BIOGRID |
| GTF2B | TBP | Reconstituted Complex | 9159119 | 9606 | 9606 | BIOGRID |
| GTF2B | TAF11 | Co-purification | 9159119 | 9606 | 9606 | BIOGRID |
| GTF2B | TAF11 | Reconstituted Complex | 9159119 | 9606 | 9606 | BIOGRID |
| GTF2B | GTF2H4 | Co-purification | 9159119 | 9606 | 9606 | BIOGRID |
| GTF2B | GTF2H4 | Reconstituted Complex | 9159119 | 9606 | 9606 | BIOGRID |
| GTF2B | JUN | Reconstituted Complex | 7848298 | 9606 | 9606 | BIOGRID |
| GTF2B | GTF2F2 | Reconstituted Complex | 8662660 | 9606 | 9606 | BIOGRID |
| GTF2B | GTF2F1 | Reconstituted Complex | 8662660 | 9606 | 9606 | BIOGRID |
| GTF2B | REL | Reconstituted Complex | 8413269 | 9606 | 9606 | BIOGRID |
| GTF2B | POLR3A | Affinity Capture-Western | 11416169 | 9606 | 9606 | BIOGRID |
| GTF2B | PKP2 | Affinity Capture-Western | 11416169 | 9606 | 9606 | BIOGRID |
| GTF2B | NR5A1 | Reconstituted Complex | 10478848 | 9606 | 9606 | BIOGRID |
| GTF2B | GTF2E2 | Reconstituted Complex | 11113176 | 9606 | 9606 | BIOGRID |
| GTF2B | KLF5 | Reconstituted Complex | 9089417 | 9606 | 9606 | BIOGRID |
| GTF2B | POLR2A | Affinity Capture-MS | 17643375 | 9606 | 9606 | BIOGRID |
| GTF2B | CTDP1 | Affinity Capture-MS | 17643375 | 9606 | 9606 | BIOGRID |
| GTF2B | POLR2H | Affinity Capture-MS | 17643375 | 9606 | 9606 | BIOGRID |
| GTF2B | NCOR1 | Reconstituted Complex | 9611234 | 9606 | 9606 | BIOGRID |
| GTF2B | TAF9 | Reconstituted Complex | 9611234 | 9606 | 9606 | BIOGRID |
| GTF2B | TBP | Reconstituted Complex | 17994014 | 9606 | 9606 | BIOGRID |
| GTF2B | NXF1 | Affinity Capture-Western | 7707528 | 9606 | 9606 | BIOGRID |
| GTF2B | TBP | Co-crystal Structure | 10619841 | 9606 | 9606 | BIOGRID |
| GTF2B | TBP | Co-crystal Structure | 7671313 | 9606 | 9606 | BIOGRID |
| GTF2B | POLR2E | Far Western | 9054408 | 9606 | 9606 | BIOGRID |
| GTF2B | TBP | Reconstituted Complex | 9054408 | 9606 | 9606 | BIOGRID |
| GTF2B | POLR2E | Affinity Capture-Western | 9054408 | 9606 | 9606 | BIOGRID |
| GTF2B | THRA | Reconstituted Complex | 7609079 | 9606 | 9606 | BIOGRID |
| GTF2B | SRA1 | Far Western | 20398657 | 9606 | 9606 | BIOGRID |
| GTF2B | RELA | Reconstituted Complex | 15013781 | 9606 | 9606 | BIOGRID |
| GTF2B | SLC22A2 | Two-hybrid | 21988832 | 9606 | 9606 | BIOGRID |
| GTF2B | HMGCL | Two-hybrid | 21988832 | 9606 | 9606 | BIOGRID |
| GTF2B | JAK3 | Two-hybrid | 21988832 | 9606 | 9606 | BIOGRID |
| GTF2B | TNIP1 | Two-hybrid | 25416956 | 9606 | 9606 | BIOGRID |
| GTF2B | DRAP1 | Two-hybrid | 25416956 | 9606 | 9606 | BIOGRID |
| GTF2B | IGKC | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| GTF2B | SERPINB1 | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| GTF2B | AMY1C | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| GTF2B | CST4 | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| GTF2B | CST1 | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| GTF2B | CST2 | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| GTF2B | PIGR | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| GTF2B | NME2P1 | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| GTF2B | ZG16B | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| GTF2B | MUC7 | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| GTF2B | IGHA1 | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| GTF2B | PRB1 | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| GTF2B | OXSM | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| GTF2B | ALKBH2 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| GTF2B | GTF2F2 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| GTF2B | NAP1L1 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| GTF2B | NSUN2 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| GTF2B | PRPF18 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| GTF2B | RFC5 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| GTF2B | AMY1C | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| GTF2B | CST2 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| GTF2B | CST1 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| GTF2B | PIGR | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| GTF2B | CST4 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| GTF2B | PRB1 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| GTF2B | IGHA1 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| GTF2B | SERPINB1 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| GTF2B | ZG16B | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| GTF2B | OXSM | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| GTF2B | IGJ | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| GTF2B | IGKC | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| GTF2B | MUC7 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| GTF2B | TNIP1 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| GTF2B | DRAP1 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| GTF2B | GOLGA6L9 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| GTF2B | UL48 | Protein-peptide | 15081896 | 9606 | 10298 | BIOGRID |
Annotation of GTF2B
TCGA cancer survival map of GTF2B
Expression of GTF2B
Disease information of GTF2B