TcoF overview
| TcoF: | INO80 | |
| GeneID: | 23522 | |
| Name: | Chromatin-remodeling ATPase INO80 | |
| Ensembl: | ENSG00000128908 | |
| Species: | Human | |
| Class: | NA | |
| Family: | INO80 complex | |
| Disease: | 0 | |
| Go term: | 34 | |
| Pathway: | 2 | |
| Hallmark: | 3 | |
| Super Enhancer: |
chr15:41268317-41313569 chr15:41268036-41313590 chr15:41273667-41317659 chr15:41274596-41306663 chr15:41261477-41295184 chr15:41264124-41317686 chr15:41267555-41318013 chr15:41273396-41294084 chr15:41272941-41285924 chr15:41273900-41306158 chr15:41369424-41382272 |
|
| Enhancer: |
chr15:41405680-41408170 chr15:41576310-41577420 chr15:41056420-41057160 chr15:41187060-41188130 chr15:41221930-41222040 chr15:41222880-41223700 chr15:41229130-41229610 chr15:41229720-41230220 chr15:41272640-41275050 chr15:41036350-41037170 chr15:41165700-41165880 chr15:41165940-41166120 chr15:41246010-41246420 chr15:41603790-41605470 chr15:41693060-41694340 chr15:41804160-41804310 chr15:41805320-41805860 chr15:41827830-41828320 chr15:41370870-41371890 chr15:41372100-41373210 chr15:41044380-41046790 chr15:41246460-41247570 chr15:41786620-41788990 chr15:41068830-41069750 chr15:41080940-41081950 chr15:41157780-41159220 chr15:41542850-41545270 chr15:41155740-41157760 chr15:41222320-41222820 chr15:41709510-41711980 chr15:41720710-41722200 chr15:41775760-41776720 chr15:41340480-41341480 chr15:41716040-41717580 chr15:41833980-41836410 chr15:41555080-41557420 chr15:41577560-41578200 chr15:41629820-41630860 chr15:40754490-40756050 chr15:40862260-40863800 chr15:40895160-40896380 chr15:40951780-40954270 chr15:41068490-41068730 chr15:41797260-41797400 chr15:41797730-41797910 chr15:41798480-41799290 chr15:41799490-41799750 chr15:41799860-41800260 chr15:41800420-41801220 chr15:41801330-41802580 chr15:41828420-41828690 chr15:41851580-41853320 chr15:42009970-42011250 chr15:42037760-42039750 chr15:40959420-40961540 chr15:42057260-42058200 chr15:41034280-41036240 chr15:41275280-41275950 chr15:41276550-41277530 chr15:41769480-41769650 chr15:41769710-41770320 chr15:41793090-41793660 chr15:41794050-41794190 chr15:41794400-41794590 chr15:42087920-42090350 chr15:42090580-42092020 chr15:42092110-42093560 chr15:42241960-42243430 chr15:42247470-42248870 chr15:42249200-42250740 chr15:42253040-42254050 chr15:41334850-41336990 chr15:41309520-41310190 chr15:41310450-41311180 chr15:41548080-41549100 chr15:41550700-41552450 chr15:41541300-41542760 chr15:41046990-41047280 chr15:41114970-41117460 chr15:41117520-41119390 chr15:41188280-41188340 chr15:41224430-41224510 chr15:41224650-41226740 chr15:41718650-41719090 chr15:41766400-41766810 chr15:41766900-41767720 chr15:41803540-41803610 chr15:41803780-41804010 chr15:42111850-42113020 chr15:42273660-42273770 chr15:41794700-41794980 chr15:41795060-41795160 chr15:41804460-41804900 chr15:40886590-40888990 chr15:41281130-41282240 chr15:41290460-41292880 chr15:41856470-41857220 chr15:41859740-41860410 chr15:41860560-41861070 chr15:41861220-41862220 chr15:41912540-41914990 chr15:41399090-41399510 chr15:41582810-41584370 chr15:41293100-41294530 chr15:41614840-41617190 chr15:41398160-41398640 |
|
| Promoter: |
chr15:41271078-41408478 |
ChIP-seq based regulatory details of INO80
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|---|---|---|---|---|---|
| TcoF_00_30815 | INO80 | cell line | CD4-Positive T-Lymphocytes | GSM1082933 | Blood | ChIP-Atlas |
| TcoF_00_30562 | INO80 | cell line | LNCAP | GSM1868496 | Prostate | ChIP-Atlas |
| TcoF_00_30682 | INO80 | cell line | A-375 | GSM2190575 | Epidermis | ChIP-Atlas |
| TcoF_00_30683 | INO80 | cell line | SK-MEL-147 | GSM2190587 | Blood | ChIP-Atlas |
| TcoF_00_30684 | INO80 | cell line | Melanocytes | GSM2190590 | Epidermis | ChIP-Atlas |
| TcoF_00_31015 | INO80 | cell line | Hep G2 | GSM2877257 | Liver | ChIP-Atlas |
| TcoF_00_40211 | INO80 | cell line | Hep-G2 | GSM2877257 | Liver | ReMap |
| TcoF_00_31016 | INO80 | cell line | Hep G2 | GSM2877258 | Liver | ChIP-Atlas |
| TcoF_00_31017 | INO80 | cell line | Hep G2 | GSM2877259 | Liver | ChIP-Atlas |
Downstream target genes of INO80
Upstream regulatory details of INO80
Protein-protein interaction of INO80
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| INO80 | ACTN4 | Affinity Capture-Western | 20197409 | 9606 | 9606 | BIOGRID |
| INO80 | ACTR5 | Affinity Capture-Western | 20197409 | 9606 | 9606 | BIOGRID |
| INO80 | ACTB | Affinity Capture-Western | 20197409 | 9606 | 9606 | BIOGRID |
| INO80 | RUVBL1 | Affinity Capture-MS | 21303910 | 9606 | 9606 | BIOGRID |
| INO80 | RUVBL2 | Affinity Capture-MS | 21303910 | 9606 | 9606 | BIOGRID |
| INO80 | ACTR5 | Affinity Capture-MS | 21303910 | 9606 | 9606 | BIOGRID |
| INO80 | INO80C | Affinity Capture-MS | 21303910 | 9606 | 9606 | BIOGRID |
| INO80 | INO80B | Affinity Capture-MS | 21303910 | 9606 | 9606 | BIOGRID |
| INO80 | YY1 | Affinity Capture-MS | 21303910 | 9606 | 9606 | BIOGRID |
| INO80 | ACTL6A | Affinity Capture-MS | 21303910 | 9606 | 9606 | BIOGRID |
| INO80 | ACTR8 | Affinity Capture-MS | 21303910 | 9606 | 9606 | BIOGRID |
| INO80 | MCRS1 | Affinity Capture-MS | 21303910 | 9606 | 9606 | BIOGRID |
| INO80 | UCHL5 | Affinity Capture-MS | 21303910 | 9606 | 9606 | BIOGRID |
| INO80 | INO80D | Affinity Capture-MS | 21303910 | 9606 | 9606 | BIOGRID |
| INO80 | INO80E | Affinity Capture-MS | 21303910 | 9606 | 9606 | BIOGRID |
| INO80 | NFRKB | Affinity Capture-MS | 21303910 | 9606 | 9606 | BIOGRID |
| INO80 | TFPT | Affinity Capture-MS | 21303910 | 9606 | 9606 | BIOGRID |
| INO80 | YY1 | Affinity Capture-Western | 18026119 | 9606 | 9606 | BIOGRID |
| INO80 | YY1 | Reconstituted Complex | 18026119 | 9606 | 9606 | BIOGRID |
| INO80 | TUBA1B | Affinity Capture-Western | 20237820 | 9606 | 9606 | BIOGRID |
| INO80 | TUBA1B | Co-localization | 20237820 | 9606 | 9606 | BIOGRID |
| INO80 | TUBA1A | Affinity Capture-Western | 22133677 | 9606 | 9606 | BIOGRID |
| INO80 | RUVBL1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| INO80 | NFRKB | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| INO80 | MBD3 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| INO80 | POLR1A | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| INO80 | ACTR5 | Affinity Capture-Western | 20855601 | 9606 | 9606 | BIOGRID |
| INO80 | DDB1 | Affinity Capture-Western | 20855601 | 9606 | 9606 | BIOGRID |
| INO80 | BAP1 | Affinity Capture-Western | 25283999 | 9606 | 9606 | BIOGRID |
| INO80 | HIST2H2AC | Affinity Capture-Western | 25283999 | 9606 | 9606 | BIOGRID |
| INO80 | MEN1 | Negative Genetic | 28481362 | 9606 | 9606 | BIOGRID |
| INO80 | MED15 | Positive Genetic | 28481362 | 9606 | 9606 | BIOGRID |
| INO80 | PLEKHF2 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| INO80 | BAP1 | Affinity Capture-Western | 31657441 | 9606 | 9606 | BIOGRID |
| INO80 | YY1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| INO80 | UCHL5 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| INO80 | NFRKB | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| INO80 | ACTR8 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| INO80 | INO80E | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| INO80 | TFPT | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| INO80 | GTF2I | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| INO80 | MCRS1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| INO80 | INO80D | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| INO80 | RBP1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
Annotation of INO80
TCGA cancer survival map of INO80
Expression of INO80
Disease information of INO80