TcoF overview
| TcoF: | KDM3A | |
| GeneID: | 8861 | |
| Name: | Lysine-specific demethylase 3A | |
| Ensembl: | ENSG00000115548 | |
| Species: | Human | |
| Class: | class HC | |
| Family: | Lysine demethylase | |
| Disease: | 1 | |
| Go term: | 27 | |
| Pathway: | 3 | |
| Hallmark: | -- | |
| Super Enhancer: |
-- |
|
| Enhancer: |
chr2:86668610-86669140 chr2:86764660-86765080 chr2:87014130-87015650 chr2:86822560-86824060 chr2:86847590-86849780 chr2:86858890-86859420 chr2:86897570-86899960 chr2:86930510-86932690 chr2:86947930-86948100 chr2:87015680-87016440 chr2:87033200-87034560 chr2:87034910-87035240 chr2:86818330-86820480 chr2:86265980-86266440 chr2:86992320-86992980 chr2:86997250-86998680 chr2:87016560-87016760 chr2:87016870-87017450 chr2:87017800-87017890 chr2:87072080-87073800 chr2:86998840-87000470 chr2:86718400-86719160 chr2:86902000-86903500 chr2:86990000-86992140 chr2:86974290-86976120 chr2:87062870-87065260 chr2:86680800-86681720 chr2:87061930-87062720 chr2:86788010-86790430 chr2:86875700-86877300 chr2:86921500-86923380 chr2:85889230-85890460 chr2:86767290-86769370 chr2:86725850-86726690 chr2:86737600-86738490 chr2:86739210-86739700 chr2:86292590-86294790 chr2:86340620-86342900 chr2:86411950-86412250 chr2:86711280-86712060 chr2:86716780-86718000 chr2:86709230-86709580 chr2:86702500-86704990 |
|
| Promoter: |
chr2:86667770-86719839 |
ChIP-seq based regulatory details of KDM3A
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|---|---|---|---|---|---|
| TcoF_00_10047 | KDM3A | cell line | HepG2 | - | Liver | ENCODE |
| TcoF_00_40483 | KDM3A | cell line | Hep-G2 | - | Liver | ReMap |
| TcoF_00_20661 | KDM3A | cell line | Jurkat | GSM1525103 | Blood | Cistrome |
| TcoF_00_20662 | KDM3A | cell line | Jurkat | GSM1525104 | Blood | Cistrome |
| TcoF_00_20663 | KDM3A | cell line | Jurkat | GSM1525105 | Blood | Cistrome |
Downstream target genes of KDM3A
Upstream regulatory details of KDM3A
Protein-protein interaction of KDM3A
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| KDM3A | ETV2 | Reconstituted Complex | 16619273 | 9606 | 9606 | BIOGRID |
| KDM3A | MKL1 | Reconstituted Complex | 17991879 | 9606 | 9606 | BIOGRID |
| KDM3A | MKL2 | Reconstituted Complex | 17991879 | 9606 | 9606 | BIOGRID |
| KDM3A | MYOCD | Reconstituted Complex | 17991879 | 9606 | 9606 | BIOGRID |
| KDM3A | HIST2H3C | Biochemical Activity | 16603237 | 9606 | 9606 | BIOGRID |
| KDM3A | AR | Affinity Capture-Western | 16603237 | 9606 | 9606 | BIOGRID |
| KDM3A | TNK2 | Affinity Capture-Western | 25148682 | 9606 | 9606 | BIOGRID |
| KDM3A | ARFGAP2 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| KDM3A | ARPP19 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| KDM3A | GART | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| KDM3A | IRF2BP1 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| KDM3A | KIAA0368 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| KDM3A | HIF1A | Affinity Capture-Western | 28843785 | 9606 | 9606 | BIOGRID |
| KDM3A | PRMT5 | Negative Genetic | 26864203 | 9606 | 9606 | BIOGRID |
Annotation of KDM3A
TCGA cancer survival map of KDM3A
Expression of KDM3A
Disease information of KDM3A