TcoF overview
TcoF: KDM6B
GeneID: 29995
Name: Lysine-specific demethylase 6B
Ensembl: ENSG00000132510
Species: Human
Class: class 3
Family: Lysine demethylase
Disease: 5
Go term: 25
Pathway: 2
Hallmark: 1
Super Enhancer:

chr17:7736912-7740995 chr17:7736500-7741530 chr17:7736892-7741613 chr17:7736626-7741066 chr17:7737523-7741348 chr17:7736381-7741267 chr17:7736628-7741029 chr17:7736894-7741603 chr17:7737173-7741089 chr17:7736080-7741089 chr17:7736461-7741214 chr17:7692349-7713552 chr17:7735795-7740881 chr17:7737562-7740181 chr17:7788549-7793568 chr17:7787291-7793577 chr17:7784802-7793638 chr17:7786062-7793686 chr17:7786500-7793577 chr17:7787817-7793547 chr17:7787948-7793589 chr17:7784715-7793820 chr17:7788011-7790934 chr17:7787995-7792756 chr17:7787805-7790527 chr17:7783333-7793732 chr17:7781951-7793034 chr17:7787807-7793623 chr17:7783706-7807692 chr17:7787171-7793334 chr17:7785556-7794021 chr17:7784433-7794075 chr17:7785344-7793677 chr17:7770822-7793040 chr17:7784602-7794476 chr17:7782128-7793877 chr17:7784508-7792527 chr17:7786207-7793120 chr17:7786084-7793192 chr17:7783441-7793698 chr17:7782880-7793727 chr17:7784157-7793197 chr17:7788648-7790765 chr17:7787178-7793319 chr17:7787178-7793319 chr17:7769599-7793085 chr17:7783461-7797643 chr17:7782969-7790980 chr17:7785783-7795041 chr17:7783762-7793624 chr17:7782609-7793585 chr17:7786855-7793573 chr17:7787478-7793050 chr17:7782980-7795802 chr17:7786625-7792533 chr17:7782224-7794035 chr17:7782757-7794028 chr17:7782268-7793674 chr17:7782432-7793541 chr17:7782280-7793813 chr17:7783479-7793624 chr17:7784146-7793644 chr17:7770885-7793050 chr17:7783042-7792974 chr17:7786293-7793050 chr17:7788616-7798166 chr17:7788668-7798327 chr17:7788665-7797578 chr17:7788961-7790262 chr17:7788616-7798166 chr17:7787123-7793406 chr17:7784997-7798081 chr17:7786144-7792940 chr17:7785781-7793593 chr17:7788049-7808472 chr17:7737682-7747180 chr17:7743787-7749031 chr17:7744264-7749135 chr17:7743734-7749213 chr17:7737136-7743713 chr17:7741696-7749601 chr17:7743164-7749420 chr17:7737711-7748230 chr17:7744078-7749067 chr17:7741204-7749243 chr17:7737938-7748228 chr17:7744041-7749089 chr17:7737213-7743268 chr17:7744299-7748921 chr17:7743698-7749376 chr17:7737497-7748239 chr17:7741659-7749271 chr17:7743937-7749105 chr17:7743234-7749211 chr17:7743675-7749235 chr17:7744332-7749017 chr17:7743896-7749052 chr17:7743392-7749064 chr17:7744303-7749077 chr17:7744021-7749208 chr17:7741644-7749489 chr17:7738104-7749073 chr17:7737105-7755250 chr17:7737168-7748636 chr17:7738211-7748867 chr17:7738101-7748930 chr17:7737491-7748985 chr17:7737194-7748875 chr17:7737690-7748837 chr17:7737158-7748579 chr17:7744277-7748672 chr17:7737206-7748979 chr17:7743882-7749310 chr17:7744020-7749333 chr17:7743630-7749214 chr17:7743339-7749208 chr17:7743756-7749333 chr17:7743927-7749203 chr17:7737682-7748865 chr17:7737269-7749162 chr17:7744046-7747382 chr17:7737201-7755146 chr17:7737268-7755641 chr17:7741311-7749653 chr17:7737551-7748275 chr17:7738984-7748261 chr17:7743890-7748834 chr17:7737740-7748883 chr17:7737582-7748446 chr17:7744112-7748920 chr17:7744172-7748905 chr17:7739137-7746542 chr17:7744330-7749245 chr17:7737115-7748808 chr17:7737607-7748149 chr17:7737451-7748480 chr17:7737241-7749070 chr17:7737626-7748389 chr17:7738299-7748306 chr17:7741676-7749521 chr17:7737139-7749390 chr17:7737135-7748942 chr17:7737648-7748588 chr17:7737075-7748389 chr17:7741713-7749389 chr17:7737157-7748854 chr17:7738220-7748605 chr17:7737341-7748561 chr17:7744458-7749061 chr17:7737472-7755212 chr17:7737223-7755748 chr17:7737223-7748588 chr17:7737223-7748588 chr17:7737499-7749301 chr17:7737264-7749086 chr17:7738247-7748254 chr17:7737152-7748715 chr17:7737870-7748256 chr17:7739224-7747890 chr17:7737585-7748225 chr17:7737570-7748313 chr17:7738598-7748313 chr17:7737243-7748712 chr17:7737717-7748432 chr17:7738446-7747931 chr17:7737246-7748711 chr17:7743639-7749392 chr17:7737109-7748910 chr17:7744309-7749052 chr17:7741624-7749256 chr17:7737728-7747457 chr17:7737497-7746850 chr17:7744384-7748974 chr17:7744087-7748895 chr17:7737213-7748563 chr17:7737673-7748985 chr17:7744375-7749271 chr17:7739010-7748198 chr17:7739015-7748820 chr17:7737767-7748775 chr17:7737555-7748273 chr17:7737107-7755774 chr17:7744269-7749207 chr17:7744284-7749045 chr17:7737141-7749211 chr17:7744170-7748851 chr17:7739209-7747317 chr17:7737949-7747950 chr17:7744076-7749615 chr17:7744360-7751446 chr17:7738499-7748865 chr17:7737065-7748965 chr17:7737070-7748851 chr17:7737204-7748741 chr17:7736934-7760875 chr17:7736438-7749657 chr17:7736741-7749170 chr17:7736906-7748987 chr17:7736831-7748691 chr17:7736567-7743782 chr17:7736795-7748982 chr17:7736689-7743268 chr17:7736852-7749051 chr17:7736891-7748992 chr17:7736570-7743507 chr17:7737022-7748921 chr17:7736629-7755197 chr17:7736796-7749364 chr17:7736947-7749202 chr17:7736646-7749026 chr17:7736785-7749585 chr17:7736320-7748681 chr17:7736534-7749444 chr17:7736537-7749532 chr17:7737057-7748572 chr17:7736778-7743694 chr17:7736657-7743248 chr17:7736482-7749486 chr17:7736292-7749470 chr17:7736547-7749102 chr17:7736480-7743116 chr17:7736729-7749401 chr17:7736476-7749440 chr17:7736349-7743509 chr17:7736860-7749199 chr17:7736562-7743404 chr17:7737001-7748893 chr17:7737018-7748724 chr17:7736833-7749189 chr17:7736900-7747880 chr17:7736776-7749010 chr17:7736853-7755064 chr17:7736935-7755190 chr17:7736449-7749254 chr17:7736786-7748893 chr17:7736237-7749395 chr17:7736712-7748387 chr17:7727403-7756912 chr17:7736461-7748239 chr17:7736740-7748742 chr17:7736997-7748887 chr17:7736913-7749006 chr17:7737052-7757659 chr17:7736451-7749815 chr17:7736128-7755969 chr17:7736955-7748871 chr17:7737023-7748996 chr17:7736486-7749590 chr17:7736663-7749327 chr17:7736809-7749139 chr17:7736792-7749229 chr17:7736675-7748790 chr17:7737026-7748819 chr17:7736213-7749250 chr17:7737018-7748712 chr17:7737016-7749388 chr17:7727790-7752865 chr17:7736527-7755982 chr17:7736949-7748846 chr17:7736680-7755760 chr17:7736957-7755583 chr17:7736398-7749375 chr17:7736854-7749199 chr17:7736996-7748879 chr17:7736797-7755205 chr17:7736686-7744255 chr17:7736446-7749165 chr17:7737038-7748866 chr17:7736391-7749321 chr17:7736060-7749899 chr17:7736761-7748880 chr17:7736641-7748925 chr17:7736567-7749493 chr17:7736560-7751322 chr17:7736680-7749169 chr17:7736652-7749236 chr17:7736686-7749091 chr17:7737016-7748294 chr17:7737239-7760859 chr17:7737042-7748954 chr17:7736360-7750083 chr17:7736789-7748267 chr17:7736935-7749025 chr17:7736992-7749082 chr17:7736718-7750062 chr17:7736380-7749269 chr17:7736867-7755279 chr17:7736990-7748893 chr17:7736473-7749367 chr17:7736714-7749001

Enhancer:

chr17:8124830-8125610 chr17:7315520-7317660 chr17:7329150-7329310 chr17:7329370-7329500 chr17:7349430-7350150 chr17:7350470-7350820 chr17:7350970-7351890 chr17:7358780-7359110 chr17:7359260-7359900 chr17:7402810-7403950 chr17:7404170-7404250 chr17:7404430-7404600 chr17:7404700-7404840 chr17:7517430-7517760 chr17:7573010-7573920 chr17:7574030-7576520 chr17:7576660-7576850 chr17:7737060-7738230 chr17:7748340-7748630 chr17:7792420-7792980 chr17:7800610-7801280 chr17:7816080-7816630 chr17:7818900-7818990 chr17:7840580-7842830 chr17:7843070-7843410 chr17:7851650-7851800 chr17:7852000-7852400 chr17:7862700-7863490 chr17:7914490-7915460 chr17:7915670-7915760 chr17:7915920-7916420 chr17:7943300-7945680 chr17:7977080-7978910 chr17:7980820-7982710 chr17:7982860-7983080 chr17:8021620-8021800 chr17:8027240-8027360 chr17:8054160-8055650 chr17:8065690-8066190 chr17:8079340-8079510 chr17:8090320-8091650 chr17:8111160-8113490 chr17:8113570-8113840 chr17:8126590-8127130 chr17:8138600-8139140 chr17:8139280-8139370 chr17:8139660-8140690 chr17:8156410-8157170 chr17:8159010-8159120 chr17:7454290-7456610 chr17:7487280-7489050 chr17:8060750-8062460 chr17:7983260-7983550 chr17:8013610-8013700 chr17:7164300-7165130 chr17:7176420-7178690 chr17:7185290-7186560 chr17:7196860-7197540 chr17:7203460-7205310 chr17:7211900-7212930 chr17:7217920-7218270 chr17:7218440-7218640 chr17:7231200-7232340 chr17:7240110-7240630 chr17:7259240-7259340 chr17:7259360-7259490 chr17:7259600-7259710 chr17:7284430-7286150 chr17:7287180-7287280 chr17:7287570-7287800 chr17:7296680-7296780 chr17:7296820-7296910 chr17:7297160-7297420 chr17:7297590-7297790 chr17:7348500-7348580 chr17:7348730-7349380 chr17:7370130-7370570 chr17:7452630-7452790 chr17:7452830-7453430 chr17:7465580-7466380 chr17:7467110-7467940 chr17:7554950-7556690 chr17:7558000-7558840 chr17:7583810-7584390 chr17:7826500-7826770 chr17:7916570-7917190 chr17:7919340-7919520 chr17:7919610-7919760 chr17:7942620-7942700 chr17:7942920-7943210 chr17:7945810-7946090 chr17:7976270-7976460 chr17:7976640-7976970 chr17:7983660-7983970 chr17:8013320-8013400 chr17:8013850-8014670 chr17:8015660-8017800 chr17:8019010-8020090 chr17:8020300-8021160 chr17:8079190-8079270 chr17:8219470-8221700 chr17:8222230-8222320 chr17:8222480-8222620 chr17:8222710-8222810 chr17:8222920-8224150 chr17:8248800-8248980 chr17:8249360-8251010 chr17:8279860-8280830 chr17:8285630-8286480 chr17:8381760-8383420 chr17:7095320-7096260 chr17:7107390-7107510 chr17:7132590-7132690 chr17:7132770-7132900 chr17:7133000-7133120 chr17:7133480-7133600 chr17:7133750-7134040 chr17:7213120-7214330 chr17:7214440-7214660 chr17:7214800-7214890 chr17:7214970-7215140 chr17:7558940-7559040 chr17:7996890-7998360 chr17:8077590-8077830 chr17:8158450-8158810 chr17:8221780-8221880 chr17:8221980-8222060 chr17:8296800-8297490 chr17:8383840-8384630 chr17:7405050-7405210 chr17:7557580-7557940 chr17:7614690-7616520 chr17:8110210-8110490 chr17:7294120-7296100 chr17:7296270-7296460 chr17:8001950-8004120 chr17:8018380-8018920 chr17:8109960-8110060 chr17:8383640-8383710 chr17:8409810-8411020 chr17:7912930-7913590 chr17:7357840-7358600 chr17:7851300-7851470 chr17:7217720-7217800 chr17:7749010-7749180 chr17:7343130-7343410 chr17:7537520-7538510 chr17:7670600-7671210 chr17:7724690-7726750 chr17:7985250-7986370 chr17:7796090-7796600 chr17:8064190-8064790 chr17:8065080-8065560 chr17:7227590-7227710 chr17:7227800-7228110 chr17:7748780-7748860 chr17:6939900-6940040 chr17:7077390-7077450 chr17:7080650-7081810 chr17:7094680-7095210 chr17:7164050-7164130 chr17:7216160-7216340 chr17:7216440-7216530 chr17:7216610-7216690 chr17:7216790-7216880 chr17:7259800-7259910 chr17:7491860-7492460 chr17:7703080-7704890 chr17:7705030-7705190 chr17:7705340-7706720 chr17:8133300-8133610 chr17:8218600-8218730 chr17:8380370-8381650 chr17:8384730-8386330 chr17:8408220-8409050 chr17:7405440-7405830 chr17:7077780-7080140 chr17:7706820-7707570 chr17:7726950-7727150 chr17:7736540-7736690 chr17:7100370-7101110 chr17:7217040-7217220 chr17:7258960-7259150 chr17:7490100-7490210 chr17:7627010-7628490 chr17:7658290-7660400 chr17:7678300-7678550 chr17:7707780-7708060 chr17:7728050-7729500 chr17:7773920-7775480 chr17:7804050-7804160 chr17:7804310-7804440 chr17:7809580-7809870 chr17:8006810-8007430 chr17:8077940-8079070 chr17:8157400-8157480 chr17:8195910-8197750 chr17:8281010-8283110 chr17:7377340-7379720 chr17:7793100-7793490 chr17:7923660-7924440 chr17:7796890-7797120 chr17:8430820-8431700 chr17:7350260-7350360 chr17:7400360-7400670 chr17:7400840-7400960 chr17:7413070-7414030 chr17:7490590-7490740 chr17:7749810-7749890 chr17:7750770-7750860 chr17:7907480-7909680 chr17:7749620-7749710 chr17:7770610-7772460 chr17:7736250-7736380 chr17:7749290-7749390 chr17:7750060-7750130 chr17:7753270-7753380 chr17:7927450-7928970 chr17:8009280-8009720 chr17:8036320-8038420 chr17:7743340-7744140 chr17:7453510-7454110 chr17:7801420-7801550 chr17:7826860-7827020 chr17:8147540-8147600

Promoter:

chr17:7743222-7758114

 ChIP-seq based regulatory details of KDM6B
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
TcoF_00_20173 KDM6B cell line BJ GSM1348337 Skin Cistrome
TcoF_00_20174 KDM6B cell line BJ GSM1348338 Skin Cistrome
TcoF_00_20226 KDM6B cell line CUTLL1 GSM1366932 Blood Cistrome
TcoF_00_40817 KDM6B cell line CUTLL1 GSM1366932 Blood ReMap
TcoF_00_20227 KDM6B cell line CUTLL1 GSM1366933 Blood Cistrome
 Downstream target genes of KDM6B
 Protein-protein interaction of KDM6B
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
KDM6B SMAD4 Affinity Capture-Western 20667911 9606 9606 BIOGRID
KDM6B SMAD1 Affinity Capture-Western 20667911 9606 9606 BIOGRID
KDM6B SMAD2 Affinity Capture-Western 20571128 9606 9606 BIOGRID
KDM6B SMAD3 Affinity Capture-Western 20571128 9606 9606 BIOGRID
KDM6B HIST1H3A Biochemical Activity 17713478 9606 9606 BIOGRID
KDM6B WDR5 Affinity Capture-Western 17825402 9606 9606 BIOGRID
KDM6B ASH2L Affinity Capture-Western 17825402 9606 9606 BIOGRID
KDM6B RBBP5 Affinity Capture-Western 17825402 9606 9606 BIOGRID
KDM6B KDM3A Negative Genetic 26864203 9606 9606 BIOGRID
KDM6B PRMT5 Negative Genetic 26864203 9606 9606 BIOGRID
KDM6B KMT2A Negative Genetic 26864203 9606 9606 BIOGRID
KDM6B PRMT7 Negative Genetic 26864203 9606 9606 BIOGRID
KDM6B KDM6B Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B ACACA Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B GMPS Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B FLAD1 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B DNAJA2 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B KARS Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B DDX20 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B STAT5B Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B SLFN13 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B CBX3 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B TIPRL Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B KIF5B Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B FARSA Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B PNMA2 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B DCAF7 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B TPM3 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B PSMC6 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B FLNA Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B RAE1 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B AKAP8 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B PSMC1 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B SLFN11 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B PSMC3 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B GSTP1 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B XPO5 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B RPIA Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B WDR6 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B FKBP5 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B IMPDH1 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B WDR77 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B PRMT2 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B DNPEP Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B USP9X Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B GANAB Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B USP24 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B PSMA1 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B TRNAU1AP Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B USP7 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B CORO1A Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B NAGK Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B DNAJA1 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B NIPBL Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B SNRPD1 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B NUDC Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B TUBG1 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B AHCYL1 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B GEMIN5 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B PCID2 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B MCMBP Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B UBQLN1 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B TNPO1 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B PDIA6 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B PSMC4 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B ANKFY1 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B RPS27L Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B MAU2 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B PYCRL Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B SRGAP2 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B KRT17 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B GART Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B CRKL Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B ACAT2 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B KDM7A Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B GEMIN4 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B ITCH Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B VARS Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B VAV1 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B KPNA1 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B EEF1D Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B USP47 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B RPS27 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B NEDD4 Affinity Capture-MS 30224337 9606 9606 BIOGRID
KDM6B USP7 Affinity Capture-Western 30224337 9606 9606 BIOGRID
KDM6B HIST1H1C Proximity Label-MS 30021884 9606 9606 BIOGRID
KDM6B PFN2 Affinity Capture-MS 24981860 9606 9606 BIOGRID
KDM6B KDM7A Affinity Capture-MS 24981860 9606 9606 BIOGRID
 Annotation of KDM6B
 TCGA cancer survival map of KDM6B


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  KDM6B