TcoF overview
| TcoF: | LIMD1 | |
| GeneID: | 4101 | |
| Name: | LIM domain-containing protein 1 | |
| Ensembl: | ENSG00000144791 | |
| Species: | Human | |
| Class: | class HC | |
| Family: | LIM | |
| Disease: | 0 | |
| Go term: | 28 | |
| Pathway: | 1 | |
| Hallmark: | 1 | |
| Super Enhancer: |
chr3:45578841-45602964 chr3:45579429-45618143 chr3:45556338-45605132 chr3:45584933-45592060 chr3:45594948-45619876 chr3:45585908-45594081 chr3:45585830-45594609 chr3:45585806-45594018 chr3:45575836-45590302 chr3:45575247-45595728 chr3:45547514-45609411 chr3:45547625-45602556 chr3:45565746-45609613 chr3:45557678-45609911 chr3:45578897-45602700 chr3:45595462-45596150 chr3:45635875-45650086 chr3:45675044-45719014 chr3:45634373-45660374 chr3:45623099-45653780 chr3:45634161-45702167 chr3:45676632-45719114 chr3:45677321-45710833 chr3:45676706-45710757 chr3:45676595-45711099 chr3:45634074-45719354 chr3:45623309-45660225 chr3:45634009-45665855 chr3:45623177-45718937 chr3:45634001-45689786 chr3:45676477-45710820 chr3:45674986-45710860 chr3:45676555-45711207 chr3:45634037-45702298 chr3:45684212-45689303 chr3:45675704-45719123 chr3:45670722-45711143 chr3:45672688-45689981 chr3:45672778-45689860 chr3:45684570-45689555 chr3:45686034-45708871 chr3:45675033-45719482 chr3:45676337-45711023 chr3:45657390-45689847 chr3:45666438-45711027 chr3:45671444-45719007 chr3:45671734-45693853 chr3:45634309-45650391 chr3:45656122-45699295 chr3:45579006-45731623 chr3:45548622-45558794 chr3:45537491-45553385 chr3:45588617-45658341 |
|
| Enhancer: |
chr3:45623330-45625810 chr3:45654380-45654730 chr3:45548480-45550840 chr3:46006620-46007760 chr3:46018910-46021190 chr3:45638520-45640630 chr3:45605570-45605960 chr3:45610210-45611160 chr3:45655120-45655640 chr3:45656400-45658350 chr3:45735380-45737120 chr3:45770560-45772790 chr3:45893620-45895890 chr3:45901720-45904170 chr3:46012170-46014570 chr3:45463570-45465930 chr3:45141560-45143410 chr3:45182760-45184070 chr3:45240170-45242260 chr3:45430170-45432210 chr3:45520460-45522710 chr3:45590330-45591570 chr3:45600830-45602990 chr3:45675580-45677640 chr3:45709850-45710980 chr3:45712160-45714050 chr3:45717870-45718410 chr3:46030410-46031510 chr3:45989850-45991440 chr3:45259560-45261440 chr3:45515330-45515730 chr3:45880090-45880430 chr3:45229230-45229510 chr3:45559700-45561130 chr3:45640700-45642350 chr3:45814190-45815900 chr3:45836160-45837790 chr3:45857500-45858390 chr3:45612780-45614900 chr3:45515990-45517210 chr3:44760560-44761690 chr3:45161230-45163320 chr3:45168730-45169920 chr3:45245140-45247060 chr3:45084870-45085950 chr3:45171650-45173720 chr3:45175060-45176670 chr3:45999130-45999540 chr3:45314430-45315990 chr3:45362190-45364530 chr3:45504880-45506920 chr3:45677740-45677930 chr3:45714310-45714940 chr3:45714990-45715720 chr3:45741240-45743700 chr3:45456060-45456820 chr3:45528450-45529540 chr3:45669530-45670770 chr3:45379320-45380660 |
|
| Promoter: |
chr3:45596886-45727833 |
ChIP-seq based regulatory details of LIMD1
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|
Downstream target genes of LIMD1
Upstream regulatory details of LIMD1
Protein-protein interaction of LIMD1
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| LIMD1 | EGLN2 | Affinity Capture-Western | 22286099 | 9606 | 9606 | BIOGRID |
| LIMD1 | EGLN1 | Affinity Capture-Western | 22286099 | 9606 | 9606 | BIOGRID |
| LIMD1 | EGLN3 | Affinity Capture-Western | 22286099 | 9606 | 9606 | BIOGRID |
| LIMD1 | VHL | Affinity Capture-Western | 22286099 | 9606 | 9606 | BIOGRID |
| LIMD1 | APP | Reconstituted Complex | 21832049 | 9606 | 9606 | BIOGRID |
| LIMD1 | TRAF6 | Affinity Capture-Western | 17092936 | 9606 | 9606 | BIOGRID |
| LIMD1 | TRAF6 | Reconstituted Complex | 17092936 | 9606 | 9606 | BIOGRID |
| LIMD1 | LIMD1 | Affinity Capture-Western | 26215701 | 9606 | 9606 | BIOGRID |
| LIMD1 | RHOBTB3 | Affinity Capture-Western | 26215701 | 9606 | 9606 | BIOGRID |
| LIMD1 | EGLN1 | Affinity Capture-Western | 26215701 | 9606 | 9606 | BIOGRID |
| LIMD1 | VHL | Affinity Capture-Western | 26215701 | 9606 | 9606 | BIOGRID |
Annotation of LIMD1
TCGA cancer survival map of LIMD1
Expression of LIMD1
Disease information of LIMD1