TcoF overview
| TcoF: | RBBP4 | |
| GeneID: | 57109 | |
| Name: | Histone-binding protein RBBP4 | |
| Ensembl: | ENSG00000162521 | |
| Species: | Human | |
| Class: | class 2 | |
| Family: | RBBP | |
| Disease: | 0 | |
| Go term: | 26 | |
| Pathway: | 18 | |
| Hallmark: | 1 | |
| Super Enhancer: |
chr1:33084455-33096269 chr1:33115117-33118387 chr1:33112631-33128229 chr1:33114711-33118832 |
|
| Enhancer: |
chr1:32814090-32814510 chr1:33525690-33527850 chr1:33198640-33200850 chr1:32930710-32932120 chr1:32859740-32860000 chr1:32885640-32887180 chr1:33049060-33051110 chr1:33097480-33099240 chr1:33099330-33099550 chr1:33099670-33100360 chr1:32706270-32706730 chr1:33045310-33046340 chr1:32857550-32859680 chr1:33334600-33336250 chr1:33427470-33429650 chr1:33490170-33492250 chr1:33500090-33502330 chr1:33412170-33413820 chr1:33449200-33451680 chr1:33231430-33233380 chr1:33233560-33233660 chr1:33233720-33234250 chr1:33234380-33235270 chr1:33235390-33235480 chr1:33240570-33240830 chr1:33352120-33354470 chr1:33189900-33191960 chr1:33223940-33226240 chr1:33456240-33456780 chr1:32716970-32718680 chr1:32780000-32782260 chr1:33005170-33007630 chr1:33088340-33090210 chr1:33092590-33093100 chr1:32729160-32729490 chr1:32729680-32730100 chr1:33151810-33154220 chr1:33201960-33202510 chr1:33238040-33238460 chr1:33298580-33299130 chr1:33359230-33359360 chr1:33361570-33363720 chr1:32739830-32739920 chr1:32740040-32740330 chr1:32740420-32740590 chr1:32740680-32740920 chr1:32741020-32741160 chr1:32741660-32741930 chr1:32902700-32904700 chr1:32909530-32910430 chr1:33107640-33108700 chr1:33295670-33296620 chr1:33047070-33048910 chr1:33060820-33062210 chr1:33245880-33246640 chr1:32566160-32568030 chr1:32581000-32581730 chr1:32586520-32587560 chr1:32598480-32600210 chr1:32616460-32618000 chr1:32645380-32645920 chr1:32646120-32646840 chr1:32647180-32649120 chr1:32771340-32773780 chr1:32814590-32815460 chr1:33166070-33168200 chr1:33194850-33196420 chr1:33207790-33210200 chr1:33241690-33242660 chr1:33256860-33258800 chr1:33261160-33261970 chr1:33263840-33264180 chr1:33264230-33265080 chr1:33327070-33327860 chr1:33365150-33366820 chr1:33476440-33476820 chr1:33495100-33496300 chr1:33513290-33513930 chr1:33547960-33549550 chr1:33562470-33563600 chr1:33584480-33585640 chr1:33607560-33609810 chr1:33625790-33627940 chr1:33641570-33642750 chr1:33644990-33646620 chr1:33694070-33695740 chr1:33752200-33753080 chr1:33766320-33767350 chr1:32604010-32605840 chr1:32700810-32702620 chr1:33618200-33620120 chr1:33480890-33481360 chr1:33497260-33498570 chr1:33487300-33489520 chr1:33469310-33471050 chr1:33699840-33700590 chr1:33709180-33710770 chr1:33771940-33772360 chr1:33471140-33473540 chr1:32919690-32920760 chr1:33059470-33060650 chr1:33100390-33100660 chr1:33214820-33215330 chr1:33243930-33244890 chr1:33363920-33364930 chr1:33413970-33415160 chr1:33415380-33415760 chr1:33418500-33420190 chr1:33620880-33622480 chr1:33300620-33301050 chr1:33142540-33145010 chr1:32201500-32201920 chr1:32538650-32540550 chr1:32702880-32704240 chr1:33420530-33422000 chr1:33684280-33685370 chr1:33686050-33687120 chr1:33688170-33688580 chr1:33586130-33587480 chr1:32705030-32705460 chr1:32795350-32796170 chr1:32797180-32797270 chr1:32797410-32797690 chr1:32797840-32798300 chr1:32798350-32798610 chr1:32799220-32799420 chr1:32810660-32812900 chr1:32842340-32843570 chr1:33385170-33387050 chr1:33560320-33562300 chr1:33628840-33631070 chr1:33729370-33729940 chr1:33737900-33739400 chr1:33754910-33755690 chr1:33767650-33768620 chr1:33733580-33735820 chr1:33102260-33103700 chr1:33605290-33607280 chr1:33076930-33079270 chr1:33515500-33516650 chr1:32959320-32960830 chr1:33121200-33121710 |
|
| Promoter: |
chr1:33116743-33151812 |
ChIP-seq based regulatory details of RBBP4
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|
Downstream target genes of RBBP4
Upstream regulatory details of RBBP4
Protein-protein interaction of RBBP4
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| RBBP4 | HDAC1 | Affinity Capture-Western | 12943729 | 9606 | 9606 | BIOGRID |
| RBBP4 | HDAC2 | Affinity Capture-Western | 12943729 | 9606 | 9606 | BIOGRID |
| RBBP4 | HDAC1 | Reconstituted Complex | 11470869 | 9606 | 9606 | BIOGRID |
| RBBP4 | HDAC3 | Reconstituted Complex | 11470869 | 9606 | 9606 | BIOGRID |
| RBBP4 | GATAD2B | Reconstituted Complex | 11756549 | 9606 | 9606 | BIOGRID |
| RBBP4 | BRCA1 | Reconstituted Complex | 10220405 | 9606 | 9606 | BIOGRID |
| RBBP4 | BRCA1 | Affinity Capture-Western | 10220405 | 9606 | 9606 | BIOGRID |
| RBBP4 | HDAC1 | Affinity Capture-Western | 9150133 | 9606 | 9606 | BIOGRID |
| RBBP4 | SIN3A | Reconstituted Complex | 9651585 | 9606 | 9606 | BIOGRID |
| RBBP4 | SAP30 | Reconstituted Complex | 9651585 | 9606 | 9606 | BIOGRID |
| RBBP4 | HDAC1 | Affinity Capture-Western | 12091390 | 9606 | 9606 | BIOGRID |
| RBBP4 | HDAC2 | Affinity Capture-Western | 12091390 | 9606 | 9606 | BIOGRID |
| RBBP4 | CREBBP | Affinity Capture-Western | 10866654 | 9606 | 9606 | BIOGRID |
| RBBP4 | XRCC6 | Two-hybrid | 16169070 | 9606 | 9606 | BIOGRID |
| RBBP4 | AEBP2 | Reconstituted Complex | 15225548 | 9606 | 9606 | BIOGRID |
| RBBP4 | EED | Reconstituted Complex | 15225548 | 9606 | 9606 | BIOGRID |
| RBBP4 | SUZ12 | Reconstituted Complex | 15225548 | 9606 | 9606 | BIOGRID |
| RBBP4 | BANF1 | Affinity Capture-Western | 19759913 | 9606 | 9606 | BIOGRID |
| RBBP4 | GATAD2A | Reconstituted Complex | 16738318 | 9606 | 9606 | BIOGRID |
| RBBP4 | GATAD2B | Reconstituted Complex | 16738318 | 9606 | 9606 | BIOGRID |
| RBBP4 | BCL11B | Reconstituted Complex | 16091750 | 9606 | 9606 | BIOGRID |
| RBBP4 | MTA2 | Affinity Capture-Western | 11602581 | 9606 | 9606 | BIOGRID |
| RBBP4 | SIN3A | Affinity Capture-Western | 11602581 | 9606 | 9606 | BIOGRID |
| RBBP4 | HDAC1 | Affinity Capture-Western | 11602581 | 9606 | 9606 | BIOGRID |
| RBBP4 | CHD4 | Reconstituted Complex | 9790534 | 9606 | 9606 | BIOGRID |
| RBBP4 | HDAC1 | Affinity Capture-Western | 17827154 | 9606 | 9606 | BIOGRID |
| RBBP4 | HDAC2 | Affinity Capture-Western | 17827154 | 9606 | 9606 | BIOGRID |
| RBBP4 | ZFPM1 | Reconstituted Complex | 21047798 | 9606 | 9606 | BIOGRID |
| RBBP4 | ZFPM1 | Co-crystal Structure | 21047798 | 9606 | 9606 | BIOGRID |
| RBBP4 | LIN9 | Affinity Capture-Western | 17671431 | 9606 | 9606 | BIOGRID |
| RBBP4 | NR2C2 | Affinity Capture-Western | 21670149 | 9606 | 9606 | BIOGRID |
| RBBP4 | NR2C1 | Affinity Capture-Western | 21670149 | 9606 | 9606 | BIOGRID |
| RBBP4 | DNMT1 | Affinity Capture-Western | 21670149 | 9606 | 9606 | BIOGRID |
| RBBP4 | KDM1A | Affinity Capture-Western | 21670149 | 9606 | 9606 | BIOGRID |
| RBBP4 | HDAC1 | Affinity Capture-Western | 21670149 | 9606 | 9606 | BIOGRID |
| RBBP4 | HDAC2 | Affinity Capture-Western | 21670149 | 9606 | 9606 | BIOGRID |
| RBBP4 | MTA2 | Affinity Capture-Western | 21670149 | 9606 | 9606 | BIOGRID |
| RBBP4 | MTA1 | Affinity Capture-Western | 21670149 | 9606 | 9606 | BIOGRID |
| RBBP4 | CHD4 | Affinity Capture-Western | 21670149 | 9606 | 9606 | BIOGRID |
| RBBP4 | MBD3 | Affinity Capture-Western | 21670149 | 9606 | 9606 | BIOGRID |
| RBBP4 | POLD3 | Affinity Capture-Western | 21670149 | 9606 | 9606 | BIOGRID |
| RBBP4 | RBBP7 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| RBBP4 | SUZ12 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| RBBP4 | SMARCA5 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| RBBP4 | SMARCA1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| RBBP4 | VCP | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| RBBP4 | TSSK3 | Two-hybrid | 21988832 | 9606 | 9606 | BIOGRID |
| RBBP4 | MTPN | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| RBBP4 | PDIA3 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| RBBP4 | RB1 | Affinity Capture-Western | 8350924 | 9606 | 9606 | BIOGRID |
| RBBP4 | NACC2 | Affinity Capture-Western | 22926524 | 9606 | 9606 | BIOGRID |
| RBBP4 | HAT1 | Two-hybrid | 25416956 | 9606 | 9606 | BIOGRID |
| RBBP4 | MTA1 | Two-hybrid | 25416956 | 9606 | 9606 | BIOGRID |
| RBBP4 | PHF6 | Affinity Capture-Western | 22720776 | 9606 | 9606 | BIOGRID |
| RBBP4 | MTA1 | Reconstituted Complex | 24920672 | 9606 | 9606 | BIOGRID |
| RBBP4 | MTA1 | Co-crystal Structure | 24920672 | 9606 | 9606 | BIOGRID |
| RBBP4 | MTA1 | Protein-peptide | 24920672 | 9606 | 9606 | BIOGRID |
| RBBP4 | GNL3 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| RBBP4 | HAT1 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| RBBP4 | HDAC2 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| RBBP4 | MTA1 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| RBBP4 | MTA2 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| RBBP4 | MTA3 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| RBBP4 | KPNA1 | Affinity Capture-Western | 26491019 | 9606 | 9606 | BIOGRID |
| RBBP4 | AEBP2 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | ANKRD27 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | ASF1A | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | ASF1B | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | C17orf49 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | BCL11A | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | BEND7 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | BPTF | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | CHAF1A | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | CHAF1B | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | CBX5 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | CDK2AP1 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | CHD3 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | CHD4 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | DPY30 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | EED | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | EZH2 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | FAM60A | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | H3F3A | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | H3F3B | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | HDAC1 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | HDAC2 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | HJURP | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | KPNA6 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | LIN37 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | LIN52 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | LIN54 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | LIN9 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | MBD2 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | MBD3 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | MTA1 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | MTA2 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | MTA3 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | MTF2 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | MYBL2 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | NOL9 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | GATAD2A | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | GATAD2B | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | PHF19 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | PWWP2A | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | RBBP7 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | SAP30 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | SIN3A | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | SIN3B | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | SAP30L | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | SUZ12 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | TUBA1C | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | ZNF512B | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | ZNF296 | Affinity Capture-MS | 27705803 | 9606 | 9606 | BIOGRID |
| RBBP4 | RYBP | Two-hybrid | 30217970 | 9606 | 9606 | BIOGRID |
| RBBP4 | MTA1 | Affinity Capture-Western | 27144666 | 9606 | 9606 | BIOGRID |
| RBBP4 | RBBP4 | Affinity Capture-Western | 27144666 | 9606 | 9606 | BIOGRID |
| RBBP4 | LIN9 | Reconstituted Complex | 25917549 | 9606 | 9606 | BIOGRID |
| RBBP4 | LIN37 | Reconstituted Complex | 25917549 | 9606 | 9606 | BIOGRID |
| RBBP4 | LIN52 | Reconstituted Complex | 25917549 | 9606 | 9606 | BIOGRID |
| RBBP4 | MYBL2 | Reconstituted Complex | 25917549 | 9606 | 9606 | BIOGRID |
| RBBP4 | RBBP7 | Negative Genetic | 28481362 | 9606 | 9606 | BIOGRID |
| RBBP4 | SALL4 | Reconstituted Complex | 29263092 | 9606 | 9606 | BIOGRID |
| RBBP4 | BCL11A | Reconstituted Complex | 29263092 | 9606 | 9606 | BIOGRID |
| RBBP4 | BCL11A | Co-crystal Structure | 29263092 | 9606 | 9606 | BIOGRID |
| RBBP4 | ZNF827 | Reconstituted Complex | 30045876 | 9606 | 9606 | BIOGRID |
| RBBP4 | ZNF827 | Co-crystal Structure | 30045876 | 9606 | 9606 | BIOGRID |
| RBBP4 | ARMC12 | Affinity Capture-Western | 30026490 | 9606 | 9606 | BIOGRID |
| RBBP4 | ARMC12 | Co-localization | 30026490 | 9606 | 9606 | BIOGRID |
| RBBP4 | ARMC12 | PCA | 30026490 | 9606 | 9606 | BIOGRID |
| RBBP4 | MECOM | Affinity Capture-Western | 30462309 | 9606 | 9606 | BIOGRID |
| RBBP4 | MECOM | Reconstituted Complex | 30462309 | 9606 | 9606 | BIOGRID |
| RBBP4 | PRDM16 | Reconstituted Complex | 30462309 | 9606 | 9606 | BIOGRID |
| RBBP4 | MECOM | Co-crystal Structure | 30462309 | 9606 | 9606 | BIOGRID |
| RBBP4 | PRDM16 | Co-crystal Structure | 30462309 | 9606 | 9606 | BIOGRID |
| RBBP4 | ERCC6 | Affinity Capture-Western | 26030138 | 9606 | 9606 | BIOGRID |
| RBBP4 | STAT5B | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| RBBP4 | MTA1 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| RBBP4 | NR2F1 | Affinity Capture-Western | 31435636 | 9606 | 9606 | BIOGRID |
| RBBP4 | HDAC1 | Affinity Capture-Western | 31435636 | 9606 | 9606 | BIOGRID |
| RBBP4 | HDAC2 | Affinity Capture-Western | 31435636 | 9606 | 9606 | BIOGRID |
| RBBP4 | HIST1H3A | Affinity Capture-Western | 31435636 | 9606 | 9606 | BIOGRID |
| RBBP4 | EZH2 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RBBP4 | BPTF | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RBBP4 | LIN9 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RBBP4 | EZH1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RBBP4 | CHD3 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RBBP4 | BCL11A | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RBBP4 | LCOR | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RBBP4 | ZNF512B | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RBBP4 | CBX1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RBBP4 | MIS12 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RBBP4 | SMARCA1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RBBP4 | hist1h3g | Co-fractionation | 23178455 | 9606 | 8355 | BIOGRID |
| RBBP4 | hist1h4a | Co-fractionation | 23178455 | 9606 | 8355 | BIOGRID |
| RBBP4 | hist1h3g | Reconstituted Complex | 23178455 | 9606 | 8355 | BIOGRID |
| RBBP4 | hist1h4a | Reconstituted Complex | 23178455 | 9606 | 8355 | BIOGRID |
Annotation of RBBP4
TCGA cancer survival map of RBBP4
Expression of RBBP4
Disease information of RBBP4