TcoF overview
| TcoF: | RNF168 | |
| GeneID: | 9025 | |
| Name: | E3 ubiquitin-protein ligase RNF168 | |
| Ensembl: | ENSG00000163961 | |
| Species: | Human | |
| Class: | class HC | |
| Family: | Ring finger protein | |
| Disease: | 2 | |
| Go term: | 28 | |
| Pathway: | 5 | |
| Hallmark: | 2 | |
| Super Enhancer: |
chr3:196220878-196241690 |
|
| Enhancer: |
chr3:196206980-196208660 chr3:195908680-195911160 chr3:196012340-196014480 chr3:196594940-196597420 chr3:196513770-196516200 chr3:196379600-196380710 chr3:196380980-196381390 chr3:196381520-196382310 chr3:195884770-195886770 chr3:195823020-195825200 chr3:196467030-196469510 chr3:195887760-195888390 chr3:196181030-196183170 chr3:196392340-196393740 chr3:196414530-196416000 chr3:195820120-195820520 chr3:195929340-195929900 chr3:196616590-196617110 chr3:196063060-196065130 chr3:196518890-196521280 chr3:195853750-195855740 chr3:195309780-195310740 chr3:195408780-195409490 chr3:195591060-195591760 chr3:196480940-196482660 chr3:196484710-196485360 chr3:196516660-196517530 chr3:196010410-196012300 chr3:195834160-195836120 chr3:195973410-195974230 chr3:196105010-196105720 chr3:195869870-195870770 chr3:196377290-196379520 chr3:195627430-195629360 chr3:195679920-195682110 chr3:195685650-195685840 chr3:195846940-195849260 chr3:196157150-196159190 chr3:196236540-196238080 chr3:196238470-196240200 chr3:196338050-196340050 chr3:196366750-196367980 chr3:196693290-196695550 chr3:196730320-196730470 chr3:196874700-196876610 chr3:196754780-196756520 chr3:195573670-195574780 chr3:195597080-195599140 chr3:195615860-195618240 chr3:195782740-195783350 chr3:195934380-195935250 chr3:195935430-195936240 chr3:196421860-196422510 chr3:196742390-196743050 chr3:196743240-196743970 chr3:196746670-196748270 chr3:196748340-196749820 chr3:196749980-196751170 chr3:196751360-196752530 chr3:196753630-196754620 chr3:195849270-195850490 chr3:195630050-195632500 chr3:195633110-195635350 chr3:195714990-195717060 chr3:195844000-195845720 chr3:196324770-196325540 chr3:196346730-196348450 chr3:196356250-196357390 chr3:196369140-196371010 chr3:196372060-196372330 chr3:196372750-196373640 chr3:196570360-196571460 |
|
| Promoter: |
chr3:196195654-196230639 |
ChIP-seq based regulatory details of RNF168
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|
Downstream target genes of RNF168
Upstream regulatory details of RNF168
Protein-protein interaction of RNF168
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| RNF168 | HIST2H2AC | Affinity Capture-Western | 19203578 | 9606 | 9606 | BIOGRID |
| RNF168 | HIST2H2AC | Biochemical Activity | 19203578 | 9606 | 9606 | BIOGRID |
| RNF168 | H2AFX | Biochemical Activity | 19500350 | 9606 | 9606 | BIOGRID |
| RNF168 | UBE2N | Affinity Capture-Western | 20725033 | 9606 | 9606 | BIOGRID |
| RNF168 | HIST2H2AC | Affinity Capture-Western | 21041483 | 9606 | 9606 | BIOGRID |
| RNF168 | HIST2H2AA3 | Affinity Capture-Western | 21041483 | 9606 | 9606 | BIOGRID |
| RNF168 | HIST2H2BE | Affinity Capture-Western | 21041483 | 9606 | 9606 | BIOGRID |
| RNF168 | HERC2 | Affinity Capture-Western | 20023648 | 9606 | 9606 | BIOGRID |
| RNF168 | KDM4A | Biochemical Activity | 22373579 | 9606 | 9606 | BIOGRID |
| RNF168 | HIST2H2AC | Biochemical Activity | 22492721 | 9606 | 9606 | BIOGRID |
| RNF168 | UBC | Reconstituted Complex | 22742833 | 9606 | 9606 | BIOGRID |
| RNF168 | KIAA0368 | Two-hybrid | 20682791 | 9606 | 9606 | BIOGRID |
| RNF168 | UBE2N | Reconstituted Complex | 19203578 | 9606 | 9606 | BIOGRID |
| RNF168 | UBE2D3 | Reconstituted Complex | 22373579 | 9606 | 9606 | BIOGRID |
| RNF168 | UBE2E1 | Reconstituted Complex | 22492721 | 9606 | 9606 | BIOGRID |
| RNF168 | UBE2D3 | Reconstituted Complex | 19500350 | 9606 | 9606 | BIOGRID |
| RNF168 | POC1A | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| RNF168 | SMARCA5 | Affinity Capture-Western | 23264744 | 9606 | 9606 | BIOGRID |
| RNF168 | UBE2N | Affinity Capture-Western | 23255131 | 9606 | 9606 | BIOGRID |
| RNF168 | HIST2H2AC | Biochemical Activity | 22980979 | 9606 | 9606 | BIOGRID |
| RNF168 | UBR5 | Affinity Capture-Western | 22884692 | 9606 | 9606 | BIOGRID |
| RNF168 | TRIP12 | Affinity Capture-Western | 22884692 | 9606 | 9606 | BIOGRID |
| RNF168 | KDM1A | Affinity Capture-Western | 24217620 | 9606 | 9606 | BIOGRID |
| RNF168 | JMJD1C | Reconstituted Complex | 24240613 | 9606 | 9606 | BIOGRID |
| RNF168 | BCL10 | Affinity Capture-Western | 24732096 | 9606 | 9606 | BIOGRID |
| RNF168 | RNF168 | Biochemical Activity | 19203578 | 9606 | 9606 | BIOGRID |
| RNF168 | UBC | Reconstituted Complex | 22266820 | 9606 | 9606 | BIOGRID |
| RNF168 | KDM1A | Reconstituted Complex | 25999347 | 9606 | 9606 | BIOGRID |
| RNF168 | PSMD11 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| RNF168 | TBP | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| RNF168 | SRCAP | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| RNF168 | CCDC174 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| RNF168 | NUB1 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| RNF168 | RPRD1B | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| RNF168 | FAM45A | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| RNF168 | SUMO2 | Affinity Capture-Western | 26675234 | 9606 | 9606 | BIOGRID |
| RNF168 | SUMO3 | Affinity Capture-Western | 26675234 | 9606 | 9606 | BIOGRID |
| RNF168 | SUMO2 | Reconstituted Complex | 26675234 | 9606 | 9606 | BIOGRID |
| RNF168 | UBC | Reconstituted Complex | 26503038 | 9606 | 9606 | BIOGRID |
| RNF168 | HIST1H1C | Reconstituted Complex | 26503038 | 9606 | 9606 | BIOGRID |
| RNF168 | UBE2D1 | Reconstituted Complex | 26508657 | 9606 | 9606 | BIOGRID |
| RNF168 | H2AFZ | Biochemical Activity | 26508657 | 9606 | 9606 | BIOGRID |
| RNF168 | HIST2H2AC | Biochemical Activity | 24518117 | 9606 | 9606 | BIOGRID |
| RNF168 | HIST1H2AB | Biochemical Activity | 27153538 | 9606 | 9606 | BIOGRID |
| RNF168 | FOXM1 | Affinity Capture-Western | 27526106 | 9606 | 9606 | BIOGRID |
| RNF168 | PALB2 | Affinity Capture-Western | 28240985 | 9606 | 9606 | BIOGRID |
| RNF168 | BRCA2 | Affinity Capture-Western | 28240985 | 9606 | 9606 | BIOGRID |
| RNF168 | UBC | Reconstituted Complex | 28240985 | 9606 | 9606 | BIOGRID |
| RNF168 | TOP2A | Affinity Capture-MS | 27558965 | 9606 | 9606 | BIOGRID |
| RNF168 | MKI67 | Affinity Capture-MS | 27558965 | 9606 | 9606 | BIOGRID |
| RNF168 | SUMO1 | Affinity Capture-MS | 27558965 | 9606 | 9606 | BIOGRID |
| RNF168 | UBB | Affinity Capture-MS | 27558965 | 9606 | 9606 | BIOGRID |
| RNF168 | TJP1 | Affinity Capture-MS | 27558965 | 9606 | 9606 | BIOGRID |
| RNF168 | PCM1 | Affinity Capture-MS | 27558965 | 9606 | 9606 | BIOGRID |
| RNF168 | PDCD11 | Affinity Capture-MS | 27558965 | 9606 | 9606 | BIOGRID |
| RNF168 | NCL | Affinity Capture-MS | 27558965 | 9606 | 9606 | BIOGRID |
| RNF168 | HNRNPM | Affinity Capture-MS | 27558965 | 9606 | 9606 | BIOGRID |
| RNF168 | DDX21 | Affinity Capture-MS | 27558965 | 9606 | 9606 | BIOGRID |
| RNF168 | RAI14 | Affinity Capture-MS | 27558965 | 9606 | 9606 | BIOGRID |
| RNF168 | LIMA1 | Affinity Capture-MS | 27558965 | 9606 | 9606 | BIOGRID |
| RNF168 | DHX9 | Affinity Capture-MS | 27558965 | 9606 | 9606 | BIOGRID |
| RNF168 | DHX15 | Affinity Capture-MS | 27558965 | 9606 | 9606 | BIOGRID |
| RNF168 | DBN1 | Affinity Capture-MS | 27558965 | 9606 | 9606 | BIOGRID |
| RNF168 | PABPC4 | Affinity Capture-MS | 27558965 | 9606 | 9606 | BIOGRID |
| RNF168 | USP10 | Affinity Capture-MS | 27558965 | 9606 | 9606 | BIOGRID |
| RNF168 | TOP2A | Affinity Capture-Western | 27558965 | 9606 | 9606 | BIOGRID |
| RNF168 | USP10 | Affinity Capture-Western | 27558965 | 9606 | 9606 | BIOGRID |
| RNF168 | TOP2A | Co-localization | 27558965 | 9606 | 9606 | BIOGRID |
| RNF168 | TOP2A | Biochemical Activity | 27558965 | 9606 | 9606 | BIOGRID |
| RNF168 | H2AFZ | Reconstituted Complex | 28506460 | 9606 | 9606 | BIOGRID |
| RNF168 | HIST1H2AI | Biochemical Activity | 27462807 | 9606 | 9606 | BIOGRID |
| RNF168 | UBE2D1 | Reconstituted Complex | 27462807 | 9606 | 9606 | BIOGRID |
| RNF168 | UBC | Reconstituted Complex | 28406400 | 9606 | 9606 | BIOGRID |
| RNF168 | HIST2H2AA3 | Reconstituted Complex | 28406400 | 9606 | 9606 | BIOGRID |
| RNF168 | UBE2D3 | Reconstituted Complex | 24518117 | 9606 | 9606 | BIOGRID |
| RNF168 | HIST2H2AC | Reconstituted Complex | 24518117 | 9606 | 9606 | BIOGRID |
| RNF168 | HIST2H2BE | Reconstituted Complex | 24518117 | 9606 | 9606 | BIOGRID |
| RNF168 | SQSTM1 | Reconstituted Complex | 27345151 | 9606 | 9606 | BIOGRID |
| RNF168 | H2AFX | Biochemical Activity | 27345151 | 9606 | 9606 | BIOGRID |
| RNF168 | UBC | Reconstituted Complex | 29330428 | 9606 | 9606 | BIOGRID |
| RNF168 | UBC | Co-crystal Structure | 29330428 | 9606 | 9606 | BIOGRID |
| RNF168 | PARP1 | Biochemical Activity | 30037213 | 9606 | 9606 | BIOGRID |
| RNF168 | TNFAIP3 | Affinity Capture-Western | 29233925 | 9606 | 9606 | BIOGRID |
| RNF168 | TNFAIP3 | Reconstituted Complex | 29233925 | 9606 | 9606 | BIOGRID |
| RNF168 | HIST1H2AB | Affinity Capture-Western | 29233925 | 9606 | 9606 | BIOGRID |
| RNF168 | HIST1H1C | Affinity Capture-Western | 29233925 | 9606 | 9606 | BIOGRID |
| RNF168 | TP53BP1 | Co-localization | 29499138 | 9606 | 9606 | BIOGRID |
| RNF168 | RNF126 | Affinity Capture-Western | 30529286 | 9606 | 9606 | BIOGRID |
| RNF168 | RNF168 | Biochemical Activity | 30529286 | 9606 | 9606 | BIOGRID |
| RNF168 | UBE2D2 | Reconstituted Complex | 30529286 | 9606 | 9606 | BIOGRID |
| RNF168 | TRIM8 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| RNF168 | HIST1H2AB | Biochemical Activity | 31501315 | 9606 | 9606 | BIOGRID |
| RNF168 | UBE2D1 | Reconstituted Complex | 31501315 | 9606 | 9606 | BIOGRID |
| RNF168 | SETD8 | Affinity Capture-Western | 31760894 | 9606 | 9606 | BIOGRID |
| RNF168 | HIST1H2AB | Biochemical Activity | 31376412 | 9606 | 9606 | BIOGRID |
| RNF168 | H2AFY | Biochemical Activity | 32424115 | 9606 | 9606 | BIOGRID |
| RNF168 | H2AFZ | Biochemical Activity | 32424115 | 9606 | 9606 | BIOGRID |
| RNF168 | H2AFX | Co-localization | 32424115 | 9606 | 9606 | BIOGRID |
| RNF168 | E7 | Co-localization | 31501315 | 9606 | 333760 | BIOGRID |
| RNF168 | E7 | Affinity Capture-Western | 31501315 | 9606 | 333760 | BIOGRID |
Annotation of RNF168
TCGA cancer survival map of RNF168
Expression of RNF168
Disease information of RNF168