TcoF overview
| TcoF: | RNF20 | |
| GeneID: | 58490 | |
| Name: | E3 ubiquitin protein ligase | |
| Ensembl: | ENSG00000155827 | |
| Species: | Human | |
| Class: | class HC | |
| Family: | Ring finger protein | |
| Disease: | 0 | |
| Go term: | 24 | |
| Pathway: | -- | |
| Hallmark: | -- | |
| Super Enhancer: |
-- |
|
| Enhancer: |
chr9:104296200-104297670 chr9:104242210-104243640 chr9:104340130-104341470 chr9:104341640-104344080 chr9:104240510-104242120 chr9:104247620-104249230 chr9:104433930-104434360 chr9:104478600-104480800 chr9:104466580-104468140 chr9:104468480-104468960 chr9:104473360-104474090 chr9:104498830-104499560 chr9:104269780-104271470 chr9:104273960-104274900 chr9:104240040-104240380 chr9:104274980-104277260 chr9:104325630-104327420 chr9:104439890-104440800 chr9:104298680-104299750 |
|
| Promoter: |
chr9:104296135-104325626 |
ChIP-seq based regulatory details of RNF20
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|
Downstream target genes of RNF20
Upstream regulatory details of RNF20
Protein-protein interaction of RNF20
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| RNF20 | TP53 | Affinity Capture-Western | 16337599 | 9606 | 9606 | BIOGRID |
| RNF20 | RNF40 | Affinity Capture-MS | 21329877 | 9606 | 9606 | BIOGRID |
| RNF20 | WAC | Affinity Capture-MS | 21329877 | 9606 | 9606 | BIOGRID |
| RNF20 | RNF40 | Affinity Capture-Western | 22155569 | 9606 | 9606 | BIOGRID |
| RNF20 | AR | Affinity Capture-Western | 22155569 | 9606 | 9606 | BIOGRID |
| RNF20 | RNF20 | Biochemical Activity | 21443952 | 9606 | 9606 | BIOGRID |
| RNF20 | HIST2H2BE | Biochemical Activity | 21443952 | 9606 | 9606 | BIOGRID |
| RNF20 | HIST2H2AA3 | Biochemical Activity | 21443952 | 9606 | 9606 | BIOGRID |
| RNF20 | HIST2H2AC | Biochemical Activity | 21443952 | 9606 | 9606 | BIOGRID |
| RNF20 | HIST2H3C | Biochemical Activity | 21443952 | 9606 | 9606 | BIOGRID |
| RNF20 | HIST2H4A | Biochemical Activity | 21443952 | 9606 | 9606 | BIOGRID |
| RNF20 | SMURF2 | Affinity Capture-Western | 22231558 | 9606 | 9606 | BIOGRID |
| RNF20 | CDC73 | Affinity Capture-Western | 22021426 | 9606 | 9606 | BIOGRID |
| RNF20 | CDC73 | Two-hybrid | 22021426 | 9606 | 9606 | BIOGRID |
| RNF20 | RNF40 | Affinity Capture-Western | 21362549 | 9606 | 9606 | BIOGRID |
| RNF20 | RNF40 | Co-purification | 16307923 | 9606 | 9606 | BIOGRID |
| RNF20 | HIST2H2BE | Biochemical Activity | 16307923 | 9606 | 9606 | BIOGRID |
| RNF20 | UBE2E1 | Affinity Capture-Western | 16307923 | 9606 | 9606 | BIOGRID |
| RNF20 | UBE2E1 | Reconstituted Complex | 16307923 | 9606 | 9606 | BIOGRID |
| RNF20 | UBE2B | Reconstituted Complex | 21443952 | 9606 | 9606 | BIOGRID |
| RNF20 | MYO1E | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| RNF20 | CDKN2B | Affinity Capture-MS | 23718855 | 9606 | 9606 | BIOGRID |
| RNF20 | KIF5B | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| RNF20 | SUPT16H | Affinity Capture-Western | 24357716 | 9606 | 9606 | BIOGRID |
| RNF20 | HIST2H2BE | Biochemical Activity | 24837678 | 9606 | 9606 | BIOGRID |
| RNF20 | UBE2A | Reconstituted Complex | 24837678 | 9606 | 9606 | BIOGRID |
| RNF20 | MSL1 | Co-fractionation | 24837678 | 9606 | 9606 | BIOGRID |
| RNF20 | MSL2 | Co-fractionation | 24837678 | 9606 | 9606 | BIOGRID |
| RNF20 | PAF1 | Co-fractionation | 24837678 | 9606 | 9606 | BIOGRID |
| RNF20 | CDK9 | Co-fractionation | 24837678 | 9606 | 9606 | BIOGRID |
| RNF20 | MSL1 | Reconstituted Complex | 24837678 | 9606 | 9606 | BIOGRID |
| RNF20 | PA2G4 | Biochemical Activity | 19037095 | 9606 | 9606 | BIOGRID |
| RNF20 | RNF40 | Affinity Capture-Western | 19410543 | 9606 | 9606 | BIOGRID |
| RNF20 | UBE2A | Reconstituted Complex | 19410543 | 9606 | 9606 | BIOGRID |
| RNF20 | UBE2B | Reconstituted Complex | 19410543 | 9606 | 9606 | BIOGRID |
| RNF20 | UBE2A | Affinity Capture-Western | 19410543 | 9606 | 9606 | BIOGRID |
| RNF20 | UBE2B | Affinity Capture-Western | 19410543 | 9606 | 9606 | BIOGRID |
| RNF20 | RNF20 | Biochemical Activity | 19410543 | 9606 | 9606 | BIOGRID |
| RNF20 | HIST1H2BB | Biochemical Activity | 19410543 | 9606 | 9606 | BIOGRID |
| RNF20 | UBE2A | Biochemical Activity | 19410543 | 9606 | 9606 | BIOGRID |
| RNF20 | UBE2B | Biochemical Activity | 19410543 | 9606 | 9606 | BIOGRID |
| RNF20 | USHBP1 | Two-hybrid | 25416956 | 9606 | 9606 | BIOGRID |
| RNF20 | UBE2L3 | Reconstituted Complex | 19037095 | 9606 | 9606 | BIOGRID |
| RNF20 | XPNPEP1 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| RNF20 | SUPT6H | Affinity Capture-Western | 24441044 | 9606 | 9606 | BIOGRID |
| RNF20 | RNF40 | Affinity Capture-Western | 24441044 | 9606 | 9606 | BIOGRID |
| RNF20 | CHEK2 | Affinity Capture-Western | 25640309 | 9606 | 9606 | BIOGRID |
| RNF20 | TPM3 | Affinity Capture-MS | 27557628 | 9606 | 9606 | BIOGRID |
| RNF20 | RPS3 | Affinity Capture-MS | 27557628 | 9606 | 9606 | BIOGRID |
| RNF20 | RNF40 | Affinity Capture-MS | 27557628 | 9606 | 9606 | BIOGRID |
| RNF20 | KIF11 | Affinity Capture-MS | 27557628 | 9606 | 9606 | BIOGRID |
| RNF20 | WAC | Affinity Capture-MS | 27557628 | 9606 | 9606 | BIOGRID |
| RNF20 | HNRNPF | Affinity Capture-MS | 27557628 | 9606 | 9606 | BIOGRID |
| RNF20 | KIF11 | Affinity Capture-Western | 27557628 | 9606 | 9606 | BIOGRID |
| RNF20 | KIF11 | Biochemical Activity | 27557628 | 9606 | 9606 | BIOGRID |
| RNF20 | TRAIP | Affinity Capture-Western | 26781088 | 9606 | 9606 | BIOGRID |
| RNF20 | RNF20 | Reconstituted Complex | 27569044 | 9606 | 9606 | BIOGRID |
| RNF20 | RNF20 | Co-crystal Structure | 27569044 | 9606 | 9606 | BIOGRID |
| RNF20 | UBE2B | Reconstituted Complex | 27569044 | 9606 | 9606 | BIOGRID |
| RNF20 | RNF40 | Reconstituted Complex | 27569044 | 9606 | 9606 | BIOGRID |
| RNF20 | FBXL19 | Affinity Capture-Western | 28453857 | 9606 | 9606 | BIOGRID |
| RNF20 | RNF20 | Negative Genetic | 30033366 | 9606 | 9606 | BIOGRID |
| RNF20 | RNF40 | Affinity Capture-Western | 29507117 | 9606 | 9606 | BIOGRID |
| RNF20 | EEF1D | Affinity Capture-Western | 30649429 | 9606 | 9606 | BIOGRID |
| RNF20 | RNF40 | Reconstituted Complex | 30649429 | 9606 | 9606 | BIOGRID |
| RNF20 | HSF1 | Reconstituted Complex | 30649429 | 9606 | 9606 | BIOGRID |
| RNF20 | TP53 | Affinity Capture-Western | 31152661 | 9606 | 9606 | BIOGRID |
| RNF20 | TP53 | Co-localization | 31152661 | 9606 | 9606 | BIOGRID |
| RNF20 | RNF20 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| RNF20 | TXNDC5 | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
| RNF20 | SNAI1 | Affinity Capture-Western | 33364200 | 9606 | 9606 | BIOGRID |
| RNF20 | EHMT2 | Affinity Capture-Western | 33364200 | 9606 | 9606 | BIOGRID |
| RNF20 | EEF1D | Biochemical Activity | 30649429 | 9606 | 9606 | BIOGRID |
Annotation of RNF20
TCGA cancer survival map of RNF20
Expression of RNF20
Disease information of RNF20