TcoF overview
TcoF: SAMD4B
GeneID: 23309
Name: Protein Smaug homolog 2
Ensembl: ENSG00000179134
Species: Human
Class: class 3
Family: Others
Disease: 0
Go term: 9
Pathway: --
Hallmark: --
Super Enhancer:

chr19:39850842-39864380 chr19:39852256-39866540 chr19:39852297-39864933 chr19:39832070-39864314 chr19:39824823-39864603 chr19:39825442-39864538 chr19:39821680-39848674

Enhancer:

chr19:39926350-39926480 chr19:39971600-39972520 chr19:39071140-39071550 chr19:39078460-39079810 chr19:39086640-39086950 chr19:39093100-39094180 chr19:39121070-39123060 chr19:39196770-39198750 chr19:39212330-39214250 chr19:39216540-39217590 chr19:39218670-39219630 chr19:39224420-39224780 chr19:39224840-39224950 chr19:39225030-39225450 chr19:39225510-39226000 chr19:39226070-39226140 chr19:39226180-39226740 chr19:39226960-39227190 chr19:39227200-39227790 chr19:39321810-39321940 chr19:39322160-39322360 chr19:39328120-39328230 chr19:39328290-39329030 chr19:39329660-39330730 chr19:39338080-39340340 chr19:39397060-39397860 chr19:39397950-39398030 chr19:39399970-39401200 chr19:39401720-39402200 chr19:39402290-39402450 chr19:39402490-39402730 chr19:39407800-39408360 chr19:39408470-39408560 chr19:39408650-39408730 chr19:39408770-39409060 chr19:39409170-39409400 chr19:39409450-39410400 chr19:39410510-39410720 chr19:39410790-39412030 chr19:39412090-39412160 chr19:39412310-39412640 chr19:39412720-39412870 chr19:39433390-39435600 chr19:39519700-39521660 chr19:39521760-39521840 chr19:39521960-39522500 chr19:39528200-39529440 chr19:39891200-39892480 chr19:39897570-39898380 chr19:39905320-39905630 chr19:39909640-39910520 chr19:39924400-39926240 chr19:39961160-39961990 chr19:39996090-39997670 chr19:39998260-39998460 chr19:40131550-40132790 chr19:40432140-40432960 chr19:40477150-40478050 chr19:40487670-40488790 chr19:40587820-40589010 chr19:39221860-39224340 chr19:39435740-39437110 chr19:39944160-39945780 chr19:39960040-39960750 chr19:40434210-40436250 chr19:39748440-39750320 chr19:39990110-39990230 chr19:39259660-39261600 chr19:39531360-39533440 chr19:39823760-39825900 chr19:39825950-39826070 chr19:39826170-39826610 chr19:39992970-39993450 chr19:39840930-39842450 chr19:39886840-39888090 chr19:39334740-39336280 chr19:38850220-38851120 chr19:39821350-39823710 chr19:39833220-39835380 chr19:39906080-39906980 chr19:39993700-39994710 chr19:39862090-39864480 chr19:39820270-39820420 chr19:40006660-40007830 chr19:40196650-40197230 chr19:40198030-40199830 chr19:39965040-39965150 chr19:40170080-40172070 chr19:40195180-40196340 chr19:39964760-39964870 chr19:39939630-39940360 chr19:38942530-38943450 chr19:39195660-39196680 chr19:39360050-39360210 chr19:39360340-39360580 chr19:39869980-39870600 chr19:39905900-39905970 chr19:39989680-39989830 chr19:39221520-39221600 chr19:39221660-39221740 chr19:39875540-39876260 chr19:39924060-39924160 chr19:39924200-39924300 chr19:39972670-39973090 chr19:39191360-39191640 chr19:39327500-39328020 chr19:39329240-39329530 chr19:39868460-39869140 chr19:39464280-39466220 chr19:39852890-39855180 chr19:40313540-40315980 chr19:39461210-39462900 chr19:39843020-39844640 chr19:39198840-39200030 chr19:39200120-39200890 chr19:39281530-39282210 chr19:39289440-39290980 chr19:39440980-39443210 chr19:39482920-39484810 chr19:39561080-39562240 chr19:39319460-39321710 chr19:39207960-39208560 chr19:39214720-39214790 chr19:39215410-39216360 chr19:39217740-39218580 chr19:39228030-39228110 chr19:39228280-39228780 chr19:39229290-39230690 chr19:39230860-39231210 chr19:39246870-39249260 chr19:39249740-39250980 chr19:39253150-39255390 chr19:39295880-39296500 chr19:39297240-39297400 chr19:39297500-39299190 chr19:39299300-39299380 chr19:39299590-39299790 chr19:39301610-39303070 chr19:39303160-39303480 chr19:39309340-39311780 chr19:39314240-39315770 chr19:39334560-39334640 chr19:39336380-39336490 chr19:39336730-39337950 chr19:39354830-39357110 chr19:39359810-39359880 chr19:39360900-39361200 chr19:39367420-39368870 chr19:39485980-39487240 chr19:39536200-39537740 chr19:39602130-39604460 chr19:39620310-39622800 chr19:39623070-39625180 chr19:39637200-39638390 chr19:39640380-39641290 chr19:39641420-39642200 chr19:39642770-39643680 chr19:39644750-39646220 chr19:39649570-39650050 chr19:39656980-39658860 chr19:40009620-40009710 chr19:40009810-40010780 chr19:40364770-40366020 chr19:40392910-40394120 chr19:40412720-40413880 chr19:40420480-40421090 chr19:40449450-40450900 chr19:39205200-39207280 chr19:39907060-39907190 chr19:39907230-39907480 chr19:40146620-40148520 chr19:39123320-39125630 chr19:39871750-39873840 chr19:39860770-39860910 chr19:39650220-39652640 chr19:39440100-39440610 chr19:39554790-39555770 chr19:39792360-39794780 chr19:39912930-39913370 chr19:40200090-40201800 chr19:39209160-39211560 chr19:39282400-39284740 chr19:39291750-39292310 chr19:39788750-39788850 chr19:39788940-39789030 chr19:39790020-39790570 chr19:39522890-39523140 chr19:40047910-40050340

Promoter:

chr19:39833036-39876350

 ChIP-seq based regulatory details of SAMD4B
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
 Downstream target genes of SAMD4B
 Protein-protein interaction of SAMD4B
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
SAMD4B SAMD4A Affinity Capture-MS 28514442 9606 9606 BIOGRID
SAMD4B PDP1 Affinity Capture-MS 28514442 9606 9606 BIOGRID
SAMD4B YWHAG Affinity Capture-MS 28514442 9606 9606 BIOGRID
SAMD4B YWHAE Affinity Capture-MS 28514442 9606 9606 BIOGRID
SAMD4B ACTA2 Affinity Capture-MS 28514442 9606 9606 BIOGRID
SAMD4B YWHAZ Affinity Capture-MS 28514442 9606 9606 BIOGRID
SAMD4B YWHAB Affinity Capture-MS 28514442 9606 9606 BIOGRID
SAMD4B NUTM1 Two-hybrid 32296183 9606 9606 BIOGRID
SAMD4B CCDC179 Two-hybrid 32296183 9606 9606 BIOGRID
SAMD4B AGO1 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B AGO2 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B APC Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B BCR Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B CCDC138 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B CDR2L Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B CEP131 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B CEP192 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B CEP350 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B CEP85 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B CNOT1 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B CNOT2 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B CNOT3 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B RQCD1 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B DENND4C Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B DNAJA1 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B DNAJA2 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B EIF4ENIF1 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B FAM193A Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B FUBP3 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B INPPL1 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B KIAA0355 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B N4BP2 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B NAV1 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B PDLIM7 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B PEAK1 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B PLEKHG1 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B PRRC2B Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B PTPN14 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B SEC16A Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B SIPA1L1 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B SIPA1L2 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B SMG5 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B SMG7 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B TBK1 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B TBKBP1 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B TDRD3 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B TNRC6B Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B TOP3B Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B UPF1 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B WDR62 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B YTHDF2 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B YWHAB Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B YWHAE Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B YWHAG Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B ALMS1 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B CCSER2 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B CDR2 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B CNOT10 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B CNOT11 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B CRTC2 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B DCP1A Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B FAM120A Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B FOXO1 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B HELZ Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B KIAA1671 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B KIF7 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B OSBPL3 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B PAN3 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B PIK3C2A Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B SDCCAG3 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B SECISBP2 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B YWHAZ Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B ANKRD52 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B GRIP1 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B ZC3H7A Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B YTHDF3 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B YWHAQ Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B ALG13 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B CCP110 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B CNOT7 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B CSPP1 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B EDC3 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B KIAA0430 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B MPHOSPH9 Proximity Label-MS 29395067 9606 9606 BIOGRID
SAMD4B TNPO2 Proximity Label-MS 29395067 9606 9606 BIOGRID
 Annotation of SAMD4B
 TCGA cancer survival map of SAMD4B


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  SAMD4B