TcoF overview
| TcoF: | SNX6 | |
| GeneID: | 7041 | |
| Name: | Sorting nexin-6 | |
| Ensembl: | ENSG00000129515 | |
| Species: | Human | |
| Class: | class 1 | |
| Family: | Others | |
| Disease: | 0 | |
| Go term: | 19 | |
| Pathway: | 1 | |
| Hallmark: | -- | |
| Super Enhancer: |
chr14:35014413-35038557 chr14:35014768-35031767 chr14:35009198-35031773 chr14:35014955-35038217 chr14:35012057-35038483 chr14:35009235-35032551 chr14:35088030-35153238 chr14:35096397-35153128 |
|
| Enhancer: |
chr14:35096850-35099110 chr14:35050800-35052330 chr14:35072680-35074800 chr14:35182770-35182870 chr14:35074920-35077000 chr14:35006260-35008760 chr14:34928830-34931300 chr14:35118060-35119220 chr14:35119260-35119550 chr14:34969400-34969910 chr14:34970800-34972860 chr14:35873000-35873620 chr14:34689850-34691750 chr14:35060640-35062250 chr14:35228050-35228880 chr14:35265890-35267960 chr14:35343870-35344340 chr14:34670870-34672160 chr14:34672290-34673170 chr14:34823520-34825990 chr14:35134200-35136520 chr14:35146630-35148270 chr14:35311180-35313500 chr14:35320220-35321130 chr14:35440400-35441940 chr14:35452420-35454210 chr14:35515840-35518130 chr14:35872070-35872350 chr14:34599980-34601080 chr14:34830480-34831490 chr14:34837110-34838890 chr14:35303120-35304610 chr14:35397180-35398860 chr14:35419230-35420460 chr14:34848440-34850040 chr14:35201940-35203280 chr14:34688280-34689430 chr14:34722680-34723520 chr14:34726470-34727940 chr14:34842920-34843640 chr14:34843950-34845750 chr14:34957980-34959190 chr14:34960040-34960900 chr14:34766670-34767730 chr14:34455880-34456570 chr14:34512100-34514380 chr14:34532190-34534350 chr14:34553880-34555280 chr14:34582060-34583700 chr14:34768420-34769320 chr14:34833640-34835050 chr14:34857190-34858400 chr14:34900860-34902140 chr14:34922460-34922840 chr14:34989140-34990660 chr14:35529780-35530790 chr14:35624060-35626230 chr14:35665560-35666980 chr14:35871270-35871590 chr14:34503650-34506000 chr14:34808880-34810280 chr14:34974360-34976180 chr14:35182340-35182450 chr14:34703710-34706050 |
|
| Promoter: |
chr14:35030299-35099366 |
ChIP-seq based regulatory details of SNX6
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|
Downstream target genes of SNX6
Upstream regulatory details of SNX6
Protein-protein interaction of SNX6
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| SNX6 | PIM1 | Reconstituted Complex | 11591366 | 9606 | 9606 | BIOGRID |
| SNX6 | SNX4 | Affinity Capture-Western | 11279102 | 9606 | 9606 | BIOGRID |
| SNX6 | SNX2 | Affinity Capture-Western | 11279102 | 9606 | 9606 | BIOGRID |
| SNX6 | BMPR1B | Affinity Capture-Western | 11279102 | 9606 | 9606 | BIOGRID |
| SNX6 | ACVR2B | Affinity Capture-Western | 11279102 | 9606 | 9606 | BIOGRID |
| SNX6 | ACVRL1 | Affinity Capture-Western | 11279102 | 9606 | 9606 | BIOGRID |
| SNX6 | SNX1 | Affinity Capture-Western | 11279102 | 9606 | 9606 | BIOGRID |
| SNX6 | TGFBR2 | Affinity Capture-Western | 11279102 | 9606 | 9606 | BIOGRID |
| SNX6 | TGFBR1 | Affinity Capture-Western | 11279102 | 9606 | 9606 | BIOGRID |
| SNX6 | PDGFRA | Affinity Capture-Western | 11279102 | 9606 | 9606 | BIOGRID |
| SNX6 | INSR | Affinity Capture-Western | 11279102 | 9606 | 9606 | BIOGRID |
| SNX6 | EGFR | Affinity Capture-Western | 11279102 | 9606 | 9606 | BIOGRID |
| SNX6 | LEPR | Affinity Capture-Western | 11279102 | 9606 | 9606 | BIOGRID |
| SNX6 | PIM1 | Affinity Capture-Western | 11279102 | 9606 | 9606 | BIOGRID |
| SNX6 | GIT1 | Affinity Capture-Western | 18523162 | 9606 | 9606 | BIOGRID |
| SNX6 | GTF2A1 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| SNX6 | H3F3A | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| SNX6 | RTF1 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| SNX6 | TSN | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| SNX6 | BRMS1 | Reconstituted Complex | 20830743 | 9606 | 9606 | BIOGRID |
| SNX6 | BRMS1 | FRET | 20830743 | 9606 | 9606 | BIOGRID |
| SNX6 | SNX2 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| SNX6 | TSPYL1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SNX6 | ZMYND8 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SNX6 | ZNF687 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SNX6 | DVL2 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
Annotation of SNX6
TCGA cancer survival map of SNX6
Expression of SNX6
Disease information of SNX6