TcoF overview
| TcoF: | STAG1 | |
| GeneID: | 257397 | |
| Name: | Cohesin subunit SA-1 | |
| Ensembl: | ENSG00000118007 | |
| Species: | Human | |
| Class: | class 2 | |
| Family: | Others | |
| Disease: | 7 | |
| Go term: | 14 | |
| Pathway: | 9 | |
| Hallmark: | 3 | |
| Super Enhancer: |
chr3:136469300-136472609 chr3:136467710-136472873 chr3:136467589-136473276 chr3:136469095-136473058 chr3:136467848-136473562 chr3:136468885-136472956 chr3:136467604-136472969 chr3:136455320-136473060 chr3:136467837-136473157 chr3:136455181-136473148 chr3:136293846-136306451 chr3:136468752-136473056 chr3:136468971-136473040 chr3:136467741-136473024 chr3:136468551-136473062 chr3:136468537-136472702 chr3:136467860-136472929 chr3:136468548-136473051 chr3:136355717-136470611 chr3:136467654-136473335 chr3:136181565-136197904 chr3:136181443-136197903 chr3:136447170-136473460 chr3:136468617-136472900 chr3:136467914-136473255 chr3:136447119-136474665 chr3:136467591-136473046 chr3:136432636-136473132 |
|
| Enhancer: |
chr3:136447140-136448590 chr3:136612050-136613810 chr3:136679250-136681380 chr3:136712030-136714250 chr3:136729930-136731780 chr3:136731900-136734190 chr3:136644080-136644320 chr3:136783680-136785410 chr3:136703000-136704820 chr3:136714400-136716250 chr3:136141890-136143550 chr3:136182930-136183720 chr3:136697040-136699300 chr3:136701190-136701650 chr3:136708410-136710770 chr3:136710930-136711550 chr3:136726210-136727560 chr3:136266020-136266850 chr3:136295450-136296180 chr3:136350130-136351990 chr3:136377400-136379240 chr3:136448930-136450850 chr3:136465940-136466560 chr3:136616950-136619040 chr3:136765840-136766800 |
|
| Promoter: |
chr3:136055078-136471245 |
ChIP-seq based regulatory details of STAG1
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|---|---|---|---|---|---|
| TcoF_00_20257 | STAG1 | cell line | GM10847 | GSM1233885 | Blood | Cistrome |
| TcoF_00_20258 | STAG1 | cell line | GM10847 | GSM1233886 | Blood | Cistrome |
| TcoF_00_20259 | STAG1 | cell line | GM12878 | GSM1233911 | Blood | Cistrome |
| TcoF_00_20260 | STAG1 | cell line | GM12878 | GSM1233912 | Blood | Cistrome |
| TcoF_00_20261 | STAG1 | cell line | GM12878 | GSM1233913 | Blood | Cistrome |
| TcoF_00_20271 | STAG1 | cell line | GM12890 | GSM1233931 | Blood | Cistrome |
| TcoF_00_20272 | STAG1 | cell line | GM12890 | GSM1233932 | Blood | Cistrome |
| TcoF_00_20273 | STAG1 | cell line | GM12891 | GSM1233953 | Blood | Cistrome |
| TcoF_00_20274 | STAG1 | cell line | GM12891 | GSM1233954 | Blood | Cistrome |
| TcoF_00_20275 | STAG1 | cell line | GM12892 | GSM1233975 | Blood | Cistrome |
| TcoF_00_20276 | STAG1 | cell line | GM12892 | GSM1233976 | Blood | Cistrome |
| TcoF_00_20277 | STAG1 | cell line | GM18486 | GSM1233991 | Blood | Cistrome |
| TcoF_00_20278 | STAG1 | cell line | GM18486 | GSM1233992 | Blood | Cistrome |
| TcoF_00_20279 | STAG1 | cell line | GM18505 | GSM1234008 | Blood | Cistrome |
| TcoF_00_20280 | STAG1 | cell line | GM18505 | GSM1234009 | Blood | Cistrome |
| TcoF_00_20281 | STAG1 | cell line | GM18526 | GSM1234025 | Blood | Cistrome |
| TcoF_00_20282 | STAG1 | cell line | GM18526 | GSM1234026 | Blood | Cistrome |
| TcoF_00_20283 | STAG1 | cell line | GM18951 | GSM1234042 | Blood | Cistrome |
| TcoF_00_20284 | STAG1 | cell line | GM18951 | GSM1234043 | Blood | Cistrome |
| TcoF_00_20285 | STAG1 | cell line | GM19099 | GSM1234059 | Blood | Cistrome |
| TcoF_00_20286 | STAG1 | cell line | GM19099 | GSM1234060 | Blood | Cistrome |
| TcoF_00_20287 | STAG1 | cell line | GM19193 | GSM1234076 | Blood | Cistrome |
| TcoF_00_20288 | STAG1 | cell line | GM19193 | GSM1234077 | Blood | Cistrome |
| TcoF_00_20289 | STAG1 | cell line | GM19238 | GSM1234097 | Blood | Cistrome |
| TcoF_00_20290 | STAG1 | cell line | GM19238 | GSM1234098 | Blood | Cistrome |
| TcoF_00_20291 | STAG1 | cell line | GM19239 | GSM1234119 | Blood | Cistrome |
| TcoF_00_20292 | STAG1 | cell line | GM19239 | GSM1234120 | Blood | Cistrome |
| TcoF_00_20293 | STAG1 | cell line | GM19240 | GSM1234142 | Blood | Cistrome |
| TcoF_00_20294 | STAG1 | cell line | GM19240 | GSM1234143 | Blood | Cistrome |
| TcoF_00_20295 | STAG1 | cell line | GM2255 | GSM1234160 | Blood | Cistrome |
| TcoF_00_20296 | STAG1 | cell line | GM2255 | GSM1234161 | Blood | Cistrome |
| TcoF_00_20297 | STAG1 | cell line | GM2588 | GSM1234178 | Blood | Cistrome |
| TcoF_00_20298 | STAG1 | cell line | GM2588 | GSM1234179 | Blood | Cistrome |
| TcoF_00_20299 | STAG1 | cell line | GM2610 | GSM1234196 | Blood | Cistrome |
| TcoF_00_20300 | STAG1 | cell line | GM2610 | GSM1234197 | Blood | Cistrome |
| TcoF_00_20301 | STAG1 | cell line | GM2630 | GSM1234214 | Blood | Cistrome |
| TcoF_00_20302 | STAG1 | cell line | GM2630 | GSM1234215 | Blood | Cistrome |
| TcoF_00_21015 | STAG1 | cell line | MS1 | GSM1234237 | Blood | Cistrome |
| TcoF_00_21016 | STAG1 | cell line | MS1 | GSM1234238 | Blood | Cistrome |
| TcoF_00_20851 | STAG1 | cell line | LoVo | GSM1239586 | Colon | Cistrome |
| TcoF_00_21147 | STAG1 | cell line | None | GSM1655736 | None | Cistrome |
| TcoF_00_21146 | STAG1 | cell line | None | GSM1655740 | None | Cistrome |
| TcoF_00_21145 | STAG1 | cell line | None | GSM2140684 | None | Cistrome |
| TcoF_00_21144 | STAG1 | cell line | None | GSM2140686 | None | Cistrome |
| TcoF_00_30119 | STAG1 | cell line | HMEC | GSM2718663 | Breast | ChIP-Atlas |
| TcoF_00_30120 | STAG1 | cell line | HMEC | GSM2718667 | Breast | ChIP-Atlas |
| TcoF_00_30057 | STAG1 | cell line | Coronary artery endothelial cells | GSM2718672 | Cardiovascular | ChIP-Atlas |
| TcoF_00_30165 | STAG1 | cell line | MCF 10A | GSM2942285 | Breast | ChIP-Atlas |
| TcoF_00_30166 | STAG1 | cell line | MCF 10A | GSM2942286 | Breast | ChIP-Atlas |
| TcoF_00_30167 | STAG1 | cell line | MCF 10A | GSM2942289 | Breast | ChIP-Atlas |
| TcoF_00_30168 | STAG1 | cell line | MCF 10A | GSM2942290 | Breast | ChIP-Atlas |
| TcoF_00_30169 | STAG1 | cell line | MCF 10A | GSM2942293 | Breast | ChIP-Atlas |
| TcoF_00_30170 | STAG1 | cell line | MCF 10A | GSM2942294 | Breast | ChIP-Atlas |
| TcoF_00_20888 | STAG1 | cell line | MCF-7 | GSM614608 | Breast | Cistrome |
| TcoF_00_20887 | STAG1 | cell line | MCF-7 | GSM614609 | Breast | Cistrome |
| TcoF_00_20886 | STAG1 | cell line | MCF-7 | GSM614616 | Breast | Cistrome |
| TcoF_00_20885 | STAG1 | cell line | MCF-7 | GSM614617 | Breast | Cistrome |
| TcoF_00_20884 | STAG1 | cell line | MCF-7 | GSM614621 | Breast | Cistrome |
| TcoF_00_20883 | STAG1 | cell line | MCF-7 | GSM614623 | Breast | Cistrome |
| TcoF_00_20559 | STAG1 | cell line | HepG2 | GSM614626 | Liver | Cistrome |
| TcoF_00_20558 | STAG1 | cell line | HepG2 | GSM614627 | Liver | Cistrome |
| TcoF_00_21213 | STAG1 | cell line | None | GSM800624 | Embryo | Cistrome |
Downstream target genes of STAG1
Upstream regulatory details of STAG1
Protein-protein interaction of STAG1
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| STAG1 | SMC1A | Co-purification | 11076961 | 9606 | 9606 | BIOGRID |
| STAG1 | SMC3 | Co-purification | 11076961 | 9606 | 9606 | BIOGRID |
| STAG1 | RAD21 | Co-purification | 11076961 | 9606 | 9606 | BIOGRID |
| STAG1 | RAD21 | Affinity Capture-MS | 17113138 | 9606 | 9606 | BIOGRID |
| STAG1 | SMC1A | Affinity Capture-MS | 17113138 | 9606 | 9606 | BIOGRID |
| STAG1 | SMC3 | Affinity Capture-MS | 17113138 | 9606 | 9606 | BIOGRID |
| STAG1 | PDS5A | Affinity Capture-MS | 17113138 | 9606 | 9606 | BIOGRID |
| STAG1 | PDS5B | Affinity Capture-MS | 17113138 | 9606 | 9606 | BIOGRID |
| STAG1 | WFDC5 | Reconstituted Complex | 17112726 | 9606 | 9606 | BIOGRID |
| STAG1 | RAD21 | Reconstituted Complex | 17112726 | 9606 | 9606 | BIOGRID |
| STAG1 | SMC1A | Reconstituted Complex | 17112726 | 9606 | 9606 | BIOGRID |
| STAG1 | SMC3 | Reconstituted Complex | 17112726 | 9606 | 9606 | BIOGRID |
| STAG1 | RAD21 | Affinity Capture-Western | 17962804 | 9606 | 9606 | BIOGRID |
| STAG1 | SMC3 | Affinity Capture-Western | 17962804 | 9606 | 9606 | BIOGRID |
| STAG1 | TERF1 | Affinity Capture-Western | 17962804 | 9606 | 9606 | BIOGRID |
| STAG1 | TINF2 | Affinity Capture-Western | 17962804 | 9606 | 9606 | BIOGRID |
| STAG1 | SMC1A | Affinity Capture-Western | 10931856 | 9606 | 9606 | BIOGRID |
| STAG1 | SMC3 | Affinity Capture-Western | 10931856 | 9606 | 9606 | BIOGRID |
| STAG1 | RAD21 | Affinity Capture-Western | 10931856 | 9606 | 9606 | BIOGRID |
| STAG1 | EXOSC9 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| STAG1 | RAD21 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| STAG1 | SMC1A | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| STAG1 | SMC1B | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| STAG1 | WAPAL | Affinity Capture-MS | 17113138 | 9606 | 9606 | BIOGRID |
| STAG1 | THAP1 | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
| STAG1 | SMC1A | Affinity Capture-Western | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | SMC3 | Affinity Capture-Western | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | SMC1A | Affinity Capture-MS | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | SMC3 | Affinity Capture-MS | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | STAG1 | Affinity Capture-MS | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | RAD21 | Affinity Capture-MS | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | WAPAL | Affinity Capture-MS | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | DSP | Affinity Capture-MS | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | HSPA8 | Affinity Capture-MS | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | JUP | Affinity Capture-MS | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | HSPA5 | Affinity Capture-MS | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | FLG2 | Affinity Capture-MS | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | DSC1 | Affinity Capture-MS | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | LMNA | Affinity Capture-MS | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | SBSN | Affinity Capture-MS | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | UBC | Affinity Capture-MS | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | LSMEM2 | Affinity Capture-MS | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | ANXA2 | Affinity Capture-MS | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | DCD | Affinity Capture-MS | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | HAND2 | Affinity Capture-MS | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | KPRP | Affinity Capture-MS | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | TMPO | Affinity Capture-MS | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | POF1B | Affinity Capture-MS | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | PKM | Affinity Capture-MS | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | TUBB3 | Affinity Capture-MS | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | TUBB8 | Affinity Capture-MS | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | SNRNP200 | Affinity Capture-Western | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | SF3B1 | Affinity Capture-Western | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | SF3B3 | Affinity Capture-Western | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | PRPF31 | Affinity Capture-Western | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | ADAR | Affinity Capture-Western | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | DDX47 | Affinity Capture-Western | 31010829 | 9606 | 9606 | BIOGRID |
| STAG1 | STAG2 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
Annotation of STAG1
TCGA cancer survival map of STAG1
Expression of STAG1
Disease information of STAG1