TcoF overview
| TcoF: | TAF1B | |
| GeneID: | 129685 | |
| Name: | TATA box-binding protein-associated factor RNA polymerase I subunit B | |
| Ensembl: | ENSG00000115750 | |
| Species: | Human | |
| Class: | class HC | |
| Family: | TATA-box | |
| Disease: | 0 | |
| Go term: | 15 | |
| Pathway: | 8 | |
| Hallmark: | -- | |
| Super Enhancer: |
chr2:9937633-9961047 chr2:9936991-9955695 chr2:9940028-9972179 chr2:9875348-9942032 chr2:9866914-9972122 chr2:9937845-9972172 chr2:9893047-9949850 chr2:9940818-9952565 chr2:9951739-9964855 chr2:9894624-9940589 chr2:9937896-9973151 chr2:9937156-9985673 chr2:9897878-9987211 chr2:10034881-10038979 chr2:9939941-9988301 chr2:10034431-10039110 chr2:9937310-9994371 chr2:10015908-10055852 chr2:9920755-9987497 chr2:10030233-10046486 chr2:9937964-9989540 chr2:10022948-10055756 chr2:9937147-9993734 chr2:10007061-10055606 chr2:9937170-9987775 chr2:9937170-9987775 chr2:9937840-9986622 chr2:9878782-9993974 chr2:9939499-9987349 chr2:10034538-10038964 chr2:10031909-10039366 chr2:9878752-9923518 chr2:9878291-9895332 chr2:9893469-9921691 chr2:9896858-9924458 chr2:9890994-9921924 chr2:9868262-9898326 chr2:9878349-9922936 chr2:9876972-9924425 chr2:9883430-9912950 |
|
| Enhancer: |
chr2:9751250-9752210 chr2:9474940-9475220 chr2:9517120-9519070 chr2:9621580-9623480 chr2:9983690-9985350 chr2:10096970-10098600 chr2:10136100-10136440 chr2:10024450-10026380 chr2:9770660-9771070 chr2:10184580-10186270 chr2:10091980-10094040 chr2:10136530-10137670 chr2:9366420-9367650 chr2:9368070-9368950 chr2:9369010-9369230 chr2:9372720-9373870 chr2:9374130-9376590 chr2:9370610-9372300 chr2:10072520-10073470 chr2:10132280-10133330 chr2:10057170-10059160 chr2:10195700-10196920 chr2:10051680-10053280 chr2:9226290-9228090 chr2:9228120-9228810 chr2:9314590-9315660 chr2:9330560-9332820 chr2:9333590-9334550 chr2:9347360-9349720 chr2:9376940-9377440 chr2:9377530-9379500 chr2:9548340-9549550 chr2:9578900-9580610 chr2:9581450-9581940 chr2:9614780-9616110 chr2:9705120-9706380 chr2:9734080-9736230 chr2:9940900-9941810 chr2:9747120-9749410 chr2:9594290-9595680 chr2:9242460-9244740 chr2:9309910-9311970 chr2:9323420-9325330 chr2:9349920-9350750 chr2:9351710-9354000 chr2:9355950-9356450 chr2:9357210-9357600 chr2:9357970-9359560 chr2:9365370-9366310 chr2:9380000-9382060 chr2:9396340-9397390 chr2:9415180-9415940 chr2:9427000-9429480 chr2:9430510-9432390 chr2:9446500-9448190 chr2:9448430-9449150 chr2:9449980-9452330 chr2:9466650-9467950 chr2:9540540-9540870 chr2:9947870-9950330 chr2:9959530-9960980 chr2:10115220-10117320 chr2:10159070-10160410 chr2:10915200-10917000 chr2:10918800-10921040 chr2:9404400-9404920 chr2:9616160-9618350 chr2:9305310-9306240 chr2:9552540-9553490 chr2:9607910-9609670 chr2:9624680-9625410 chr2:10263020-10263100 chr2:10263180-10263510 chr2:10263660-10263860 chr2:10263980-10264840 chr2:10264980-10267000 chr2:10009200-10011070 chr2:9002850-9004290 chr2:9631280-9633020 chr2:9303110-9304570 chr2:9554710-9557200 chr2:10032060-10033240 chr2:10106760-10107070 chr2:10107150-10108630 chr2:10109340-10109560 chr2:10149280-10151280 chr2:10151530-10153510 chr2:10153840-10155720 chr2:10234700-10235720 chr2:10236830-10238570 chr2:10021550-10022830 chr2:10059950-10060960 chr2:9284100-9286430 chr2:9636410-9637240 chr2:9637380-9639670 chr2:10360330-10362410 chr2:9238520-9240170 chr2:10542220-10543570 chr2:9942440-9944110 chr2:10100510-10101170 chr2:10101570-10102220 chr2:10105300-10105410 chr2:10308460-10309040 chr2:10309320-10311690 chr2:10392600-10393880 chr2:10394610-10395990 |
|
| Promoter: |
chr2:9983572-10074545 |
ChIP-seq based regulatory details of TAF1B
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|
Downstream target genes of TAF1B
Upstream regulatory details of TAF1B
Protein-protein interaction of TAF1B
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| TAF1B | TBP | Reconstituted Complex | 7801123 | 9606 | 9606 | BIOGRID |
| TAF1B | TAF1C | Reconstituted Complex | 7801123 | 9606 | 9606 | BIOGRID |
| TAF1B | UBTF | Reconstituted Complex | 10913176 | 9606 | 9606 | BIOGRID |
| TAF1B | HIST2H2BE | Affinity Capture-Western | 17179179 | 9606 | 9606 | BIOGRID |
| TAF1B | HIST2H2AC | Affinity Capture-Western | 17179179 | 9606 | 9606 | BIOGRID |
| TAF1B | HIST2H3C | Affinity Capture-Western | 17179179 | 9606 | 9606 | BIOGRID |
| TAF1B | HIST2H4A | Affinity Capture-Western | 17179179 | 9606 | 9606 | BIOGRID |
| TAF1B | THAP7 | Reconstituted Complex | 16195249 | 9606 | 9606 | BIOGRID |
| TAF1B | TRB | Reconstituted Complex | 12511607 | 9606 | 9606 | BIOGRID |
| TAF1B | RXRA | Reconstituted Complex | 12511607 | 9606 | 9606 | BIOGRID |
| TAF1B | PGR | Reconstituted Complex | 12511607 | 9606 | 9606 | BIOGRID |
| TAF1B | THAP7 | Two-hybrid | 15561719 | 9606 | 9606 | BIOGRID |
| TAF1B | TAF1D | Affinity Capture-Western | 17318177 | 9606 | 9606 | BIOGRID |
| TAF1B | TAF1D | Co-purification | 17318177 | 9606 | 9606 | BIOGRID |
| TAF1B | APP | Reconstituted Complex | 21832049 | 9606 | 9606 | BIOGRID |
| TAF1B | KAT2B | Co-localization | 23667505 | 9606 | 9606 | BIOGRID |
| TAF1B | TAF1D | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| TAF1B | TAF1A | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| TAF1B | TAF1C | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| TAF1B | TAF1D | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| TAF1B | TAF1C | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| TAF1B | TAF1A | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| TAF1B | CALR | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
Annotation of TAF1B
TCGA cancer survival map of TAF1B
Expression of TAF1B
Disease information of TAF1B