TcoF overview
TcoF: TBP
GeneID: 26053
Name: TATA-box-binding protein
Ensembl: ENSG00000112592
Species: Human
Class: class 1
Family: TATA-box
Disease: 6
Go term: 42
Pathway: 28
Hallmark: --
Super Enhancer:

--
Enhancer:

chr6:170892840-170893380 chr6:170460870-170461240 chr6:170552640-170555140 chr6:170850470-170852350 chr6:170844490-170846320 chr6:170615930-170618320 chr6:170696900-170697370 chr6:170698700-170699930 chr6:170675240-170677060 chr6:170814160-170814800 chr6:170459830-170460740 chr6:170501460-170501710 chr6:170540690-170543050 chr6:170604700-170606950 chr6:170532540-170533300 chr6:170533550-170534090 chr6:170892280-170892590 chr6:170921260-170921910 chr6:170271040-170272890 chr6:170914210-170915530 chr6:170788840-170789890 chr6:170853590-170853800 chr6:170537150-170538160 chr6:170401780-170402940 chr6:170653500-170655510 chr6:170711240-170713630 chr6:170806120-170808020 chr6:170798400-170800120 chr6:170559100-170560960 chr6:170561120-170561540 chr6:170766200-170766760 chr6:170768250-170770190 chr6:170849240-170849430

Promoter:

chr6:170863390-170881958

 ChIP-seq based regulatory details of TBP
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
TcoF_00_30857 TBP cell line ME-1 GSM1122308 Blood ChIP-Atlas
TcoF_00_40760 TBP cell line ME-1 GSM1122308 Blood ReMap
TcoF_00_31168 TBP cell line K-562 GSM1341816 Bone Marrow ChIP-Atlas
TcoF_00_40810 TBP cell line K-562 GSM1341816 Bone Marrow ReMap
TcoF_00_31117 TBP cell Bronchial tracheal epithelial cells GSM3261560 Lung ChIP-Atlas
TcoF_00_40227 TBP cell line HBTEC_MOI20_12hpi GSM3261560 Bronchia ReMap
TcoF_00_31118 TBP cell Bronchial tracheal epithelial cells GSM3261561 Lung ChIP-Atlas
TcoF_00_40228 TBP cell line HBTEC_MOI20_18hpi GSM3261561 Bronchia ReMap
TcoF_00_40229 TBP cell line HBTEC_MOI5_dl312_18hpi GSM3261569 Bronchia ReMap
TcoF_00_31119 TBP cell Bronchial tracheal epithelial cells GSM3261570 Lung ChIP-Atlas
TcoF_00_31120 TBP cell Bronchial tracheal epithelial cells GSM3261571 Lung ChIP-Atlas
TcoF_00_40225 TBP cell line HBTEC_DM_MOI100_12hpi GSM3261578 Bronchia ReMap
TcoF_00_40226 TBP cell line HBTEC_DM_MOI100_18hpi GSM3261579 Bronchia ReMap
TcoF_00_31121 TBP cell Bronchial tracheal epithelial cells GSM3261580 Lung ChIP-Atlas
TcoF_00_31122 TBP cell Bronchial tracheal epithelial cells GSM3261581 Lung ChIP-Atlas
TcoF_00_30602 TBP cell line GM12878 GSM935277 Blood ChIP-Atlas
TcoF_00_40049 TBP cell line GM12878 GSM935277 Blood ReMap
TcoF_00_30603 TBP cell line Hep G2 GSM935280 Liver ChIP-Atlas
TcoF_00_40059 TBP cell line Hep-G2 GSM935280 Liver ReMap
TcoF_00_30607 TBP cell line hESC H1 GSM935303 Embryo ChIP-Atlas
TcoF_00_40053 TBP cell line WA01 GSM935303 None ReMap
TcoF_00_30613 TBP cell line K-562 GSM935495 Bone Marrow ChIP-Atlas
TcoF_00_40062 TBP cell line K-562 GSM935495 Bone Marrow ReMap
TcoF_00_30627 TBP cell line HeLa GSM935606 Uterus ChIP-Atlas
TcoF_00_40056 TBP cell line HeLa-S3 GSM935606 Uterus ReMap
 Downstream target genes of TBP
 Protein-protein interaction of TBP
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
TBP GTF2B Co-crystal Structure 14963322 9606 9606 BIOGRID
TBP TAF4 Affinity Capture-Western 12665565 9606 9606 BIOGRID
TBP TAF6 Affinity Capture-Western 12665565 9606 9606 BIOGRID
TBP TAF7 Affinity Capture-Western 12665565 9606 9606 BIOGRID
TBP TAF7L Affinity Capture-Western 12665565 9606 9606 BIOGRID
TBP SNAPC4 Reconstituted Complex 12621023 9606 9606 BIOGRID
TBP GTF3C2 Reconstituted Complex 10373544 9606 9606 BIOGRID
TBP GTF3C3 Reconstituted Complex 10373544 9606 9606 BIOGRID
TBP GTF3C4 Reconstituted Complex 10373544 9606 9606 BIOGRID
TBP GTF3C5 Reconstituted Complex 10373544 9606 9606 BIOGRID
TBP NR3C1 Reconstituted Complex 9649342 9606 9606 BIOGRID
TBP MSX1 Affinity Capture-Western 10215616 9606 9606 BIOGRID
TBP KDM5A Reconstituted Complex 7935440 9606 9606 BIOGRID
TBP JUN Reconstituted Complex 7848298 9606 9606 BIOGRID
TBP GTF2A1 Reconstituted Complex 11509574 9606 9606 BIOGRID
TBP REL Reconstituted Complex 8413269 9606 9606 BIOGRID
TBP BRF1 Reconstituted Complex 10921893 9606 9606 BIOGRID
TBP BRF1 Affinity Capture-Western 10921893 9606 9606 BIOGRID
TBP GTF2F2 Reconstituted Complex 8577725 9606 9606 BIOGRID
TBP BRF1 Reconstituted Complex 7624363 9606 9606 BIOGRID
TBP GTF2F1 Reconstituted Complex 7590250 9606 9606 BIOGRID
TBP BTAF1 Reconstituted Complex 9488487 9606 9606 BIOGRID
TBP GTF2A1 Reconstituted Complex 9603936 9606 9606 BIOGRID
TBP GTF2A2 Reconstituted Complex 9603936 9606 9606 BIOGRID
TBP GTF2E2 Reconstituted Complex 9677423 9606 9606 BIOGRID
TBP RXRA Reconstituted Complex 7667283 9606 9606 BIOGRID
TBP RXRA Two-hybrid 7667283 9606 9606 BIOGRID
TBP ESR1 Reconstituted Complex 11595744 9606 9606 BIOGRID
TBP TP53 Reconstituted Complex 1465435 9606 9606 BIOGRID
TBP NFYB Affinity Capture-Western 9153318 9606 9606 BIOGRID
TBP TAF5 Affinity Capture-Western 9153318 9606 9606 BIOGRID
TBP TAF1 Co-purification 9153318 9606 9606 BIOGRID
TBP TAF4 Co-purification 9153318 9606 9606 BIOGRID
TBP TAF6 Co-purification 9153318 9606 9606 BIOGRID
TBP TAF7 Co-purification 9153318 9606 9606 BIOGRID
TBP TAF9 Co-purification 9153318 9606 9606 BIOGRID
TBP TAF10 Co-purification 9153318 9606 9606 BIOGRID
TBP TAF11 Co-purification 9153318 9606 9606 BIOGRID
TBP NFYB Reconstituted Complex 9153318 9606 9606 BIOGRID
TBP NFYC Reconstituted Complex 9153318 9606 9606 BIOGRID
TBP FOS Reconstituted Complex 8065335 9606 9606 BIOGRID
TBP FOS Affinity Capture-Western 8065335 9606 9606 BIOGRID
TBP POU2F2 Reconstituted Complex 8202368 9606 9606 BIOGRID
TBP POU2F1 Reconstituted Complex 8202368 9606 9606 BIOGRID
TBP POU2F2 Affinity Capture-Western 8202368 9606 9606 BIOGRID
TBP POU2F1 Affinity Capture-Western 8202368 9606 9606 BIOGRID
TBP GTF2F1 Biochemical Activity 9482861 9606 9606 BIOGRID
TBP TBP Affinity Capture-Western 8650542 9606 9606 BIOGRID
TBP TAF1 Co-purification 7680771 9606 9606 BIOGRID
TBP TAF2 Co-purification 7680771 9606 9606 BIOGRID
TBP TAF5 Co-purification 7680771 9606 9606 BIOGRID
TBP TAF6 Co-purification 7680771 9606 9606 BIOGRID
TBP TAF10 Co-purification 7680771 9606 9606 BIOGRID
TBP GTF2A1 Biochemical Activity 11278496 9606 9606 BIOGRID
TBP HMGB1 Reconstituted Complex 9880542 9606 9606 BIOGRID
TBP PAX6 Affinity Capture-Western 10359315 9606 9606 BIOGRID
TBP TP53 Affinity Capture-Western 10359315 9606 9606 BIOGRID
TBP PAX6 Reconstituted Complex 10359315 9606 9606 BIOGRID
TBP PAX3 Reconstituted Complex 10359315 9606 9606 BIOGRID
TBP GTF2A1 Reconstituted Complex 7958900 9606 9606 BIOGRID
TBP GTF2A2 Reconstituted Complex 7958900 9606 9606 BIOGRID
TBP FOXF2 Reconstituted Complex 9722567 9606 9606 BIOGRID
TBP GTF2E2 Reconstituted Complex 11113176 9606 9606 BIOGRID
TBP KLF5 Reconstituted Complex 9089417 9606 9606 BIOGRID
TBP GTF2A1L Reconstituted Complex 12107178 9606 9606 BIOGRID
TBP HMGB1 Reconstituted Complex 8006019 9606 9606 BIOGRID
TBP TAF1 Reconstituted Complex 19240132 9606 9606 BIOGRID
TBP TAF2 Reconstituted Complex 19240132 9606 9606 BIOGRID
TBP TAF3 Reconstituted Complex 19240132 9606 9606 BIOGRID
TBP TAF4 Reconstituted Complex 19240132 9606 9606 BIOGRID
TBP TAF5 Reconstituted Complex 19240132 9606 9606 BIOGRID
TBP TAF6 Reconstituted Complex 19240132 9606 9606 BIOGRID
TBP TAF7 Reconstituted Complex 19240132 9606 9606 BIOGRID
TBP TAF9 Reconstituted Complex 19240132 9606 9606 BIOGRID
TBP TAF10 Reconstituted Complex 19240132 9606 9606 BIOGRID
TBP TAF11 Reconstituted Complex 19240132 9606 9606 BIOGRID
TBP TAF12 Reconstituted Complex 19240132 9606 9606 BIOGRID
TBP TAF13 Reconstituted Complex 19240132 9606 9606 BIOGRID
TBP DDX5 Affinity Capture-Western 17011493 9606 9606 BIOGRID
TBP SPI1 Affinity Capture-Western 11593411 9606 9606 BIOGRID
TBP ZNF76 Affinity Capture-Western 15280358 9606 9606 BIOGRID
TBP TAF1 Affinity Capture-Western 17967894 9606 9606 BIOGRID
TBP TAF2 Affinity Capture-Western 17967894 9606 9606 BIOGRID
TBP TAF4 Affinity Capture-Western 17967894 9606 9606 BIOGRID
TBP TAF5 Affinity Capture-Western 17967894 9606 9606 BIOGRID
TBP TAF6 Affinity Capture-Western 17967894 9606 9606 BIOGRID
TBP TAF8 Affinity Capture-Western 17967894 9606 9606 BIOGRID
TBP TAF9 Affinity Capture-Western 17967894 9606 9606 BIOGRID
TBP TAF10 Affinity Capture-Western 17967894 9606 9606 BIOGRID
TBP TAF11 Affinity Capture-Western 17967894 9606 9606 BIOGRID
TBP TAF12 Affinity Capture-Western 17967894 9606 9606 BIOGRID
TBP TAF1 Co-purification 17375202 9606 9606 BIOGRID
TBP TAF5 Co-purification 17375202 9606 9606 BIOGRID
TBP TAF10 Co-purification 17375202 9606 9606 BIOGRID
TBP TAF8 Co-purification 17375202 9606 9606 BIOGRID
TBP TAF6 Co-purification 17375202 9606 9606 BIOGRID
TBP TAF11 Co-purification 17375202 9606 9606 BIOGRID
TBP TAF1D Affinity Capture-Western 17318177 9606 9606 BIOGRID
TBP TAF1 Affinity Capture-Western 8858156 9606 9606 BIOGRID
TBP TAF5 Affinity Capture-Western 8858156 9606 9606 BIOGRID
TBP TAF6 Affinity Capture-Western 8858156 9606 9606 BIOGRID
TBP TAF4 Affinity Capture-Western 8858156 9606 9606 BIOGRID
TBP TAF4B Affinity Capture-Western 8858156 9606 9606 BIOGRID
TBP TAF3 Affinity Capture-Western 11438666 9606 9606 BIOGRID
TBP TAF1 Co-purification 9603525 9606 9606 BIOGRID
TBP TAF4 Co-purification 9603525 9606 9606 BIOGRID
TBP TAF5 Co-purification 9603525 9606 9606 BIOGRID
TBP TAF6 Co-purification 9603525 9606 9606 BIOGRID
TBP TAF7 Co-purification 9603525 9606 9606 BIOGRID
TBP TAF10 Co-purification 9603525 9606 9606 BIOGRID
TBP TAF11 Co-purification 9603525 9606 9606 BIOGRID
TBP TAF12 Co-purification 9603525 9606 9606 BIOGRID
TBP TBP Co-purification 9603525 9606 9606 BIOGRID
TBP GTF2A1 Reconstituted Complex 2247058 9606 9606 BIOGRID
TBP CPSF1 Affinity Capture-Western 9311784 9606 9606 BIOGRID
TBP TAF5 Affinity Capture-Western 9311784 9606 9606 BIOGRID
TBP TAF7 Affinity Capture-Western 9311784 9606 9606 BIOGRID
TBP CPSF1 Affinity Capture-RNA 9311784 9606 9606 BIOGRID
TBP TAF5 Affinity Capture-RNA 9311784 9606 9606 BIOGRID
TBP TAF7 Affinity Capture-RNA 9311784 9606 9606 BIOGRID
TBP CPSF2 Affinity Capture-RNA 9311784 9606 9606 BIOGRID
TBP TAF1 Affinity Capture-RNA 9311784 9606 9606 BIOGRID
TBP TAF4 Affinity Capture-RNA 9311784 9606 9606 BIOGRID
TBP TAF6 Affinity Capture-RNA 9311784 9606 9606 BIOGRID
TBP CPSF3 Affinity Capture-RNA 9311784 9606 9606 BIOGRID
TBP TBP Affinity Capture-RNA 9311784 9606 9606 BIOGRID
TBP EP300 Affinity Capture-Western 8995708 9606 9606 BIOGRID
TBP CREBBP Affinity Capture-Western 8995708 9606 9606 BIOGRID
TBP TAF1 Affinity Capture-Western 8995708 9606 9606 BIOGRID
TBP TAF4 Affinity Capture-Western 22323595 9606 9606 BIOGRID
TBP TAF5 Affinity Capture-Western 22323595 9606 9606 BIOGRID
TBP TAF6 Affinity Capture-Western 22323595 9606 9606 BIOGRID
TBP TAF7 Affinity Capture-Western 22323595 9606 9606 BIOGRID
TBP TAF10 Affinity Capture-Western 22323595 9606 9606 BIOGRID
TBP FOS Affinity Capture-Western 16055710 9606 9606 BIOGRID
TBP FATE1 Two-hybrid 16713569 9606 9606 BIOGRID
TBP BRF1 Two-hybrid 16713569 9606 9606 BIOGRID
TBP CXXC1 Two-hybrid 16713569 9606 9606 BIOGRID
TBP COL26A1 Two-hybrid 16713569 9606 9606 BIOGRID
TBP HAP1 Two-hybrid 16713569 9606 9606 BIOGRID
TBP SPI1 Reconstituted Complex 8434021 9606 9606 BIOGRID
TBP TP53 Reconstituted Complex 12379483 9606 9606 BIOGRID
TBP E2F1 Reconstituted Complex 8255752 9606 9606 BIOGRID
TBP SNAPC2 Reconstituted Complex 8524284 9606 9606 BIOGRID
TBP SNAPC1 Reconstituted Complex 8524284 9606 9606 BIOGRID
TBP SP1 Two-hybrid 12753906 9606 9606 BIOGRID
TBP TAF5 Affinity Capture-Western 15870280 9606 9606 BIOGRID
TBP TAF6 Affinity Capture-Western 15870280 9606 9606 BIOGRID
TBP TAF1 Affinity Capture-Western 9674425 9606 9606 BIOGRID
TBP TAF4 Affinity Capture-Western 9674425 9606 9606 BIOGRID
TBP TAF5 Affinity Capture-Western 9674425 9606 9606 BIOGRID
TBP TAF6 Affinity Capture-Western 9674425 9606 9606 BIOGRID
TBP TBP Affinity Capture-Western 9674425 9606 9606 BIOGRID
TBP TAF5 Affinity Capture-Western 7744009 9606 9606 BIOGRID
TBP TAF10 Affinity Capture-Western 7744009 9606 9606 BIOGRID
TBP TAF8 Affinity Capture-Western 23326349 9606 9606 BIOGRID
TBP MEF2A Affinity Capture-Western 23326349 9606 9606 BIOGRID
TBP GNB2 Affinity Capture-Western 23326349 9606 9606 BIOGRID
TBP SSX2IP Two-hybrid 25416956 9606 9606 BIOGRID
TBP GTF2A1 Affinity Capture-Western 12941701 9606 9606 BIOGRID
TBP YEATS2 Affinity Capture-Western 18838386 9606 9606 BIOGRID
TBP YEATS2 Reconstituted Complex 18838386 9606 9606 BIOGRID
TBP DR1 Reconstituted Complex 18838386 9606 9606 BIOGRID
TBP DRAP1 Reconstituted Complex 18838386 9606 9606 BIOGRID
TBP DYRK1A Affinity Capture-MS 26496610 9606 9606 BIOGRID
TBP BRF1 Affinity Capture-MS 26496610 9606 9606 BIOGRID
TBP TAF1C Affinity Capture-MS 26496610 9606 9606 BIOGRID
TBP TAF1B Affinity Capture-MS 26496610 9606 9606 BIOGRID
TBP TAF1A Affinity Capture-MS 26496610 9606 9606 BIOGRID
TBP KIAA1143 Affinity Capture-MS 26496610 9606 9606 BIOGRID
TBP TAF1D Affinity Capture-MS 26496610 9606 9606 BIOGRID
TBP SP1 Reconstituted Complex 25363021 9606 9606 BIOGRID
TBP USP10 Affinity Capture-Western 26393420 9606 9606 BIOGRID
TBP BRF1 Affinity Capture-Western 18391023 9606 9606 BIOGRID
TBP TAF11 Reconstituted Complex 29111974 9606 9606 BIOGRID
TBP TAF13 Reconstituted Complex 29111974 9606 9606 BIOGRID
TBP TP53 Reconstituted Complex 8405994 9606 9606 BIOGRID
TBP TP53 Reconstituted Complex 8395834 9606 9606 BIOGRID
TBP DR1 Two-hybrid 32296183 9606 9606 BIOGRID
TBP PSME3 Two-hybrid 32296183 9606 9606 BIOGRID
TBP HMBOX1 Two-hybrid 32296183 9606 9606 BIOGRID
TBP GOLGA2 Two-hybrid 32296183 9606 9606 BIOGRID
TBP HCVgp1 Reconstituted Complex 12379483 9606 11103 BIOGRID
TBP HCVgp1 Affinity Capture-Western 12379483 9606 11103 BIOGRID
TBP tat Two-hybrid 12753906 9606 11676 BIOGRID
TBP Abt1 Affinity Capture-Western 10648625 9606 10090 BIOGRID
 Annotation of TBP
 TCGA cancer survival map of TBP


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  TBP