TcoF overview
TcoF: TDP2
GeneID: 10318
Name: Tyrosyl-DNA phosphodiesterase 2
Ensembl: ENSG00000111802
Species: Human
Class: class 2
Family: Others
Disease: 9
Go term: 18
Pathway: 3
Hallmark: 2
Super Enhancer:

chr6:24655824-24667218 chr6:24655827-24667204 chr6:24655818-24667216 chr6:24645815-24684900 chr6:24645351-24668641 chr6:24645872-24684844 chr6:24658610-24668980 chr6:24662247-24668471 chr6:24655193-24669952

--
Enhancer:

chr6:24775730-24777450 chr6:24643550-24645850 chr6:25014380-25016160 chr6:25061060-25063190 chr6:24918630-24920820 chr6:24874730-24875910 chr6:24876050-24877170 chr6:24606840-24607380 chr6:24672940-24673530 chr6:24440000-24441000 chr6:24306940-24307430 chr6:24308080-24308700 chr6:24330160-24331090 chr6:24581240-24582470 chr6:24716550-24718760 chr6:24742420-24744680 chr6:24935270-24936060 chr6:25053390-25055640 chr6:25055660-25058130 chr6:24861980-24862940 chr6:24631200-24631920 chr6:24441340-24442090 chr6:24830900-24832480 chr6:24403460-24405390 chr6:24500950-24502750 chr6:24503660-24505090 chr6:24809100-24809940 chr6:24658960-24660740 chr6:25052260-25052410 chr6:24951830-24952580 chr6:25175440-25175860 chr6:25176810-25177290 chr6:25178350-25180600 chr6:25229100-25231200 chr6:25232680-25233290 chr6:24847270-24847760 chr6:24847920-24848250 chr6:24857930-24859450 chr6:24984720-24986990 chr6:24778830-24780890 chr6:25083810-25084400 chr6:24827100-24828360 chr6:24682120-24682400 chr6:24471720-24472800 chr6:24996520-24998440 chr6:25000350-25000550 chr6:25089780-25090260 chr6:25173010-25175300 chr6:25280060-25282420 chr6:24683250-24685060 chr6:24899910-24900520 chr6:24973830-24976020

--
Promoter:

chr6:24650207-24667158

False
 ChIP-seq based regulatory details of TDP2
select * from encode where Experiment_target='TDP2'
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
 Downstream target genes of TDP2
 Protein-protein interaction of TDP2
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
TDP2 ETS1 Reconstituted Complex 12743594 9606 9606 BIOGRID
TDP2 ETS1 Affinity Capture-Western 12743594 9606 9606 BIOGRID
TDP2 PARK7 Affinity Capture-Western 19023331 9606 9606 BIOGRID
TDP2 DVL2 Two-hybrid 27107012 9606 9606 BIOGRID
TDP2 TFIP11 Two-hybrid 27107012 9606 9606 BIOGRID
TDP2 BTBD2 Two-hybrid 27107012 9606 9606 BIOGRID
TDP2 GOLGA2 Two-hybrid 27107012 9606 9606 BIOGRID
TDP2 BLK Two-hybrid 32296183 9606 9606 BIOGRID
TDP2 E6 PCA 22898364 9606 333923 BIOGRID
TDP2 E6 PCA 22898364 9606 10600 BIOGRID
TDP2 E6 PCA 22898364 9606 10621 BIOGRID
TDP2 E6 PCA 22898364 9606 333760 BIOGRID
TDP2 E6 PCA 22898364 9606 333763 BIOGRID
 Annotation of TDP2
 TCGA cancer survival map of TDP2


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  TDP2