TcoF overview
| TcoF: | UBA52 | |
| GeneID: | 51377 | |
| Name: | 60S ribosomal protein L40 | |
| Ensembl: | ENSG00000221983 | |
| Species: | Human | |
| Class: | class 2 | |
| Family: | Others | |
| Disease: | 0 | |
| Go term: | 74 | |
| Pathway: | 131 | |
| Hallmark: | 5 | |
| Super Enhancer: |
chr19:18672690-18686569 |
|
| Enhancer: |
chr19:18547690-18547780 chr19:18668760-18671220 chr19:17830430-17831740 chr19:18046000-18047210 chr19:18173090-18174680 chr19:18191810-18192950 chr19:18193080-18194240 chr19:18264100-18266260 chr19:18272000-18272080 chr19:18272310-18272770 chr19:18279360-18279530 chr19:18284780-18285840 chr19:18304280-18304670 chr19:18304840-18305580 chr19:18322090-18322560 chr19:18322750-18324170 chr19:18328090-18328950 chr19:18364010-18366020 chr19:18378380-18380270 chr19:18418370-18420480 chr19:18451530-18453660 chr19:18499990-18501950 chr19:18543850-18543940 chr19:18544020-18544390 chr19:18557290-18557550 chr19:18682720-18684100 chr19:18699710-18699800 chr19:18699890-18700220 chr19:18700490-18701660 chr19:18705240-18707430 chr19:18333130-18335040 chr19:18497440-18499090 chr19:18701740-18702910 chr19:18313550-18314700 chr19:18561790-18562360 chr19:18853840-18854910 chr19:17865490-17865920 chr19:17889040-17889410 chr19:17946860-17947930 chr19:18048010-18050300 chr19:18104370-18105600 chr19:18112380-18113980 chr19:18196140-18197560 chr19:18208640-18209560 chr19:18271370-18271720 chr19:18271770-18271860 chr19:18278120-18279280 chr19:18543540-18543630 chr19:18543690-18543780 chr19:18544420-18544510 chr19:18544630-18545020 chr19:18652810-18654290 chr19:18707600-18707700 chr19:18707860-18709240 chr19:18895900-18896300 chr19:18896350-18896480 chr19:18931540-18933560 chr19:18958640-18960880 chr19:18967110-18967680 chr19:19042940-19043730 chr19:19137040-19139390 chr19:19313690-19313830 chr19:19335240-19335780 chr19:19336080-19337290 chr19:17889690-17891680 chr19:18971790-18972810 chr19:17886320-17886790 chr19:17895040-17895530 chr19:18099340-18100240 chr19:18119390-18119510 chr19:18119590-18119770 chr19:18180520-18181370 chr19:18305660-18305760 chr19:18305900-18306800 chr19:18543020-18543360 chr19:18543410-18543500 chr19:18898460-18899020 chr19:18900920-18901370 chr19:18901420-18901650 chr19:18542670-18542800 chr19:18542880-18542950 chr19:18649250-18650180 chr19:18251700-18252480 chr19:18644160-18645600 chr19:18349510-18351080 chr19:18119930-18120400 chr19:18202810-18203600 chr19:18232730-18233480 chr19:18684210-18684470 chr19:18956930-18958550 chr19:18404730-18406000 chr19:18535950-18538160 chr19:18574500-18576220 chr19:18602780-18605190 chr19:18704390-18704870 chr19:18704910-18705050 chr19:18723940-18724680 chr19:18747950-18749820 chr19:18767040-18767470 chr19:18772510-18774530 chr19:18774710-18775070 chr19:18794640-18796220 chr19:18823630-18825150 chr19:18827660-18827850 chr19:18829910-18831160 chr19:18836210-18837490 chr19:18854960-18856630 chr19:18860780-18861820 chr19:18969060-18971120 chr19:18979040-18979350 chr19:19247220-19249230 chr19:18267010-18269360 chr19:18431380-18433830 chr19:18342290-18343750 chr19:18406180-18406370 chr19:18547290-18547490 chr19:18672970-18674270 chr19:18856770-18857860 chr19:18924900-18925490 chr19:19256830-19257080 chr19:18857920-18858370 chr19:19004380-19006630 chr19:18311260-18311680 chr19:18456450-18458750 chr19:18640080-18641110 chr19:18053660-18054060 chr19:18246650-18248040 chr19:19014230-19015570 chr19:18454720-18456400 chr19:19215740-19216360 chr19:19216540-19217070 chr19:19230990-19231570 chr19:19231670-19231800 chr19:18054800-18057110 chr19:18183860-18184320 chr19:18184410-18185480 chr19:18036650-18037430 chr19:18170900-18171930 chr19:18961050-18961490 chr19:18976980-18977320 chr19:19257460-19257550 chr19:18062220-18064430 chr19:18133950-18135910 chr19:18214630-18216850 chr19:18289590-18291000 chr19:18425340-18426830 chr19:18609620-18610890 chr19:18949440-18950030 chr19:18270030-18271280 chr19:18194300-18195510 chr19:18254820-18255270 chr19:18286520-18287940 chr19:18288100-18288520 chr19:18331330-18331680 chr19:18331730-18331910 chr19:18331990-18332070 chr19:18332100-18332940 chr19:18345990-18346820 chr19:18802150-18802780 chr19:18870400-18870810 chr19:18894000-18895000 chr19:18895170-18895700 chr19:18899320-18899400 chr19:18899720-18899960 chr19:18961680-18962940 chr19:18990200-18991080 chr19:18995630-18996720 chr19:19090540-19091280 chr19:19105300-19105950 chr19:19112970-19113670 chr19:19160240-19162110 chr19:19217200-19217640 chr19:19244730-19245590 chr19:19259740-19260030 chr19:19260760-19261490 chr19:19286100-19287710 chr19:19296480-19296840 chr19:19296910-19297700 chr19:19322870-19324220 chr19:19325520-19326490 chr19:19119240-19120660 chr19:18296180-18296980 chr19:18538230-18538560 chr19:18538620-18538700 chr19:18541740-18542160 chr19:18542230-18542450 chr19:18542520-18542600 chr19:18545930-18546070 chr19:18546290-18546370 chr19:18546490-18546560 chr19:18546730-18546840 chr19:18547060-18547130 chr19:18684560-18685670 chr19:18685780-18685860 chr19:19038660-19038770 chr19:19038850-19038930 chr19:18886630-18887980 chr19:18991240-18992040 chr19:18993080-18994890 chr19:19313380-19313590 chr19:18344210-18345700 chr19:18471850-18474200 chr19:18569950-18572390 chr19:18596680-18598300 chr19:18598460-18600890 chr19:18650530-18652370 chr19:18821600-18822740 chr19:18984740-18987170 chr19:19149660-19152100 chr19:18480760-18481440 chr19:18572660-18574280 chr19:18623380-18624580 chr19:18876340-18876400 chr19:18104020-18104290 chr19:18650270-18650360 chr19:18026030-18028060 chr19:18140150-18141200 chr19:18141500-18141750 chr19:18218420-18219000 chr19:18329060-18329140 chr19:18671800-18672840 chr19:18859350-18860590 chr19:18967830-18968120 chr19:17942210-17942480 chr19:17943740-17945370 chr19:17983490-17984940 chr19:18034560-18035780 chr19:18325660-18326330 chr19:18466920-18467800 chr19:18576390-18576600 chr19:18733160-18733900 chr19:19021160-19021770 chr19:19372370-19373530 chr19:19163000-19164960 chr19:19231980-19232110 chr19:19289490-19291490 chr19:19312850-19313130 chr19:18420670-18422110 chr19:18422160-18423410 chr19:18971400-18971630 chr19:18033000-18033340 chr19:18145380-18146900 chr19:18557620-18559770 chr19:18869750-18870360 chr19:18879600-18880770 chr19:18883770-18884220 chr19:18503170-18504170 chr19:19082060-19084520 chr19:18272860-18273010 chr19:18566620-18569010 chr19:18763290-18765510 chr19:18798320-18798560 chr19:19257680-19257800 chr19:18982320-18983280 chr19:18964160-18965400 chr19:19088800-19090090 chr19:18703150-18704030 chr19:18846650-18847730 chr19:19049690-19049770 chr19:18775250-18775390 chr19:19043860-19044500 chr19:19057760-19058220 chr19:19059310-19060200 chr19:18885800-18886450 |
|
| Promoter: |
chr19:18682540-18688360 |
ChIP-seq based regulatory details of UBA52
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|
Downstream target genes of UBA52
Upstream regulatory details of UBA52
Protein-protein interaction of UBA52
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| UBA52 | VDAC2 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| UBA52 | USP9X | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| UBA52 | VDAC3 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| UBA52 | VDAC1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| UBA52 | UNK | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| UBA52 | ZRANB2 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| UBA52 | ZFYVE19 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| UBA52 | ZSCAN18 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| UBA52 | VAMP2 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| UBA52 | UFM1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| UBA52 | UFC1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| UBA52 | RAB2A | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| UBA52 | RPL13 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| UBA52 | RPL35 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| UBA52 | RPL35A | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| UBA52 | RPL4 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| UBA52 | RPLP2 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| UBA52 | RPS4X | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| UBA52 | UBA52 | Affinity Capture-MS | 28292943 | 9606 | 9606 | BIOGRID |
| UBA52 | MDM2 | Affinity Capture-Western | 30690837 | 9606 | 9606 | BIOGRID |
| UBA52 | CCNB1 | Affinity Capture-Western | 31814919 | 9606 | 9606 | BIOGRID |
| UBA52 | HIST2H2BF | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
| UBA52 | REXO1 | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
| UBA52 | ACER1 | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
| UBA52 | DNAH5 | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
| UBA52 | SPOCK2 | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
| UBA52 | HIST1H2AH | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
| UBA52 | DENND2D | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
| UBA52 | CD207 | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
| UBA52 | SHANK1 | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
| UBA52 | EMX2 | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
| UBA52 | CRMP1 | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
| UBA52 | HIST2H2BE | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
| UBA52 | PHF3 | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
| UBA52 | NLRP1 | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
| UBA52 | MAGIX | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
| UBA52 | HIST3H3 | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
| UBA52 | HIST1H2BH | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
| UBA52 | NUP37 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| UBA52 | SMARCAL1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| UBA52 | HOXA5 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| UBA52 | CIAO1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
Annotation of UBA52
TCGA cancer survival map of UBA52
Expression of UBA52
Disease information of UBA52