TcoF overview
| TcoF: | Brca2 | |
| GeneID: | 12190 | |
| Name: | Breast cancer type 2 susceptibility protein homolog | |
| Ensembl: | ENSMUSG00000041147 | |
| Species: | Mouse | |
| Class: | NA | |
| Family: | Others | |
| Disease: | -- | |
| Go-trem: | 54 | |
| Pathway: | 5 | |
| Super Enhancer: | chr5:150563411-150564156 chr5:150561380-150562747 chr5:150561493-150566883 chr5:150561313-150563385 chr5:150559540-150567133 chr5:150538522-150539362 |
|
| Enhancer: |
chr5:151267820-151268810 chr5:151269010-151269350 chr5:151380650-151389820 chr5:151395000-151396830 chr5:151413550-151415200 chr5:151427690-151433880 chr5:151465080-151468070 chr5:151476520-151479680 chr5:151271080-151271340 chr5:151467600-151468000 chr5:151476520-151477250 chr5:151268730-151268810 chr5:151395300-151396830 chr5:151467500-151468070 chr5:151396640-151396830 chr5:151395640-151396830 chr5:151467360-151468070 chr5:151476520-151477330 chr5:151393410-151396830 chr5:151413360-151417260 chr5:151465770-151468070 chr5:151476520-151478520 chr5:151214000-151215680 chr5:151394630-151396830 chr5:151413860-151415060 chr5:151467070-151468070 chr5:151394000-151396830 chr5:151412910-151416740 chr5:151466330-151468070 chr5:151476520-151476900 chr5:151394640-151396830 chr5:151465680-151468070 chr5:151476520-151477860 chr5:151238480-151239270 chr5:151241380-151242060 chr5:151325850-151326850 chr5:151394550-151396830 chr5:151466930-151468070 chr5:151476520-151478020 chr5:151239900-151241280 chr5:151238390-151239270 chr5:151325850-151326560 chr5:151394480-151396830 chr5:151467150-151468070 chr5:151476520-151477700 chr5:151239900-151241090 chr5:151109150-151109440 chr5:151420330-151426840 chr5:151466860-151468070 chr5:151476520-151478780 chr5:151270560-151271500 chr5:151467370-151468070 chr5:151476520-151477300 chr5:151393250-151396830 chr5:151421150-151427120 chr5:151465620-151468070 chr5:151268280-151268810 chr5:151325850-151326800 chr5:151467330-151468070 chr5:151476520-151476680 chr5:151394810-151396830 chr5:151476520-151477400 chr5:151325850-151325920 chr5:151467430-151468070 chr5:151476520-151477310 chr5:151467340-151468070 chr5:151467240-151468070 chr5:151325850-151327810 chr5:151380050-151382630 chr5:151391430-151396830 chr5:151325850-151327000 chr5:151394430-151396830 chr5:151465950-151468070 chr5:151246430-151248340 chr5:151385940-151387160 chr5:151395820-151396830 chr5:151467570-151468070 chr5:151476520-151477140 chr5:151467200-151468070 chr5:151148700-151149490 chr5:151192940-151193210 chr5:151258740-151260310 chr5:151260490-151261030 chr5:151266850-151268810 chr5:151269520-151272150 chr5:151280650-151281340 chr5:151281440-151281760 chr5:151385810-151386830 chr5:151394700-151396830 chr5:151467420-151468070 chr5:150995650-151003170 chr5:151325850-151327010 chr5:151268630-151268810 chr5:151270920-151271680 chr5:151395380-151396700 chr5:151467300-151468070 chr5:151476520-151477290 chr5:151574780-151575640 chr5:151211620-151212580 chr5:151260040-151260310 chr5:151467320-151468070 chr5:151476520-151478110 chr5:151641740-151643800 chr5:151378520-151378820 chr5:151378910-151379210 chr5:151379340-151383510 chr5:151394610-151396830 chr5:151186680-151188210 chr5:151268300-151268810 chr5:151269520-151270020 chr5:151325850-151326720 chr5:151379820-151382750 chr5:151467220-151468070 chr5:151476520-151478720 chr5:151258470-151260310 chr5:151265590-151268810 chr5:151269520-151272250 chr5:151259860-151260310 chr5:151266980-151268200 chr5:151381260-151382030 chr5:151467180-151468070 chr5:151476520-151477340 chr5:151266670-151268810 chr5:151269520-151270450 chr5:151372720-151374210 chr5:151380200-151388180 chr5:151395280-151396830 chr5:151476520-151477380 chr5:151491000-151494550 chr5:151312780-151313820 chr5:151385020-151387020 chr5:151394150-151396830 chr5:151423760-151425210 chr5:151428080-151428560 chr5:151492740-151494220 chr5:151526100-151528020 chr5:151394420-151396830 chr5:151062910-151066050 chr5:151394460-151396830 chr5:151467260-151468070 chr5:151476520-151477930 chr5:151413780-151414920 chr5:151367600-151369460 chr5:151372720-151374180 chr5:151395320-151396830 chr5:151467270-151468070 chr5:151421040-151426600 chr5:150957960-150959160 chr5:151018540-151019150 chr5:151386260-151386840 chr5:151394410-151396830 chr5:151467190-151468070 chr5:150957040-150958880 chr5:151108650-151109390 chr5:151385880-151387260 chr5:151424100-151425190 chr5:151259010-151260310 chr5:151268270-151268810 chr5:151269520-151269890 chr5:151427560-151429820 chr5:151476520-151476710 chr5:151259740-151260310 chr5:151476520-151477270 chr5:151211390-151212830 chr5:151325850-151327550 chr5:151368270-151369460 chr5:151467030-151468070 chr5:151135320-151136630 chr5:151187230-151188290 chr5:151260060-151260310 chr5:151381280-151381800 chr5:151414370-151414640 chr5:151641920-151643080 chr5:151175420-151176630 chr5:151211410-151212010 chr5:151467480-151468070 chr5:151476520-151477240 chr5:151270700-151271790 chr5:151394020-151396830 chr5:151413000-151415860 chr5:151325850-151327690 chr5:151394260-151396830 chr5:151413650-151415790 chr5:151467140-151468070 chr5:151476520-151477360 chr5:151394620-151396830 chr5:151414380-151414940 chr5:151476520-151477390 chr5:151268600-151268810 chr5:151269010-151269300 chr5:150997150-150998810 chr5:151467410-151468070 chr5:151164710-151165380 chr5:151259730-151260310 chr5:151268460-151268810 chr5:151269520-151270010 chr5:151270840-151271930 chr5:151385090-151387260 chr5:151395800-151396830 chr5:151211450-151211960 chr5:151467590-151468070 chr5:151476520-151476730 |
|
| Promoter: |
chr5:150520622-150524622 |
ChIP-seq based regulatory details of Brca2
| Sample ID | Experiment target | Biosample term name | Cell type | Tissue type | Source |
|---|
Downstream target genes of Brca2
Protein-protein interaction of Brca2
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| Brca2 | Rad51 | Two-hybrid | 20211142 | 10090 | 10090 | BIOGRID |
| Brca2 | Rad51b | Two-hybrid | 20211142 | 10090 | 10090 | BIOGRID |
| Brca2 | Fancd2 | Affinity Capture-Western | 16127665 | 10090 | 10090 | BIOGRID |
| Brca2 | Rad51 | Affinity Capture-Western | 15359272 | 10090 | 10090 | BIOGRID |
| Brca2 | Brca1 | Affinity Capture-Western | 11477095 | 10090 | 10090 | BIOGRID |
| Brca2 | Rad51 | Affinity Capture-Western | 12893777 | 10090 | 10090 | BIOGRID |
| Brca2 | Trp53bp1 | Phenotypic Enhancement | 23657012 | 10090 | 10090 | BIOGRID |
| Brca2 | 4930502E18Rik | Two-hybrid | 18307534 | 10090 | 10090 | BIOGRID |
| Brca2 | Psmd6 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Brca2 | Uqcc1 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Brca2 | Atm | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Brca2 | Bre | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Brca2 | Fancd2 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Brca2 | Mcph1 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Brca2 | Pds5b | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Brca2 | Prg4 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Brca2 | Rbbp8 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Brca2 | Xrcc2 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Brca2 | Xrcc3 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
Annotation of Brca2
Expression of Brca2
Disease information of Brca2