TcoF overview
| TcoF: | Dnmt3b | |
| GeneID: | 13436 | |
| Name: | DNA | |
| Ensembl: | ENSMUSG00000027478 | |
| Species: | Mouse | |
| Class: | NA | |
| Family: | DNA_methylase | |
| Disease: | -- | |
| Go-trem: | 30 | |
| Pathway: | 9 | |
| Super Enhancer: | chr2:153703414-153713762 chr2:153712455-153713428 chr2:153651688-153652061 chr2:153656107-153658531 chr2:153693088-153694424 chr2:153674930-153678331 chr2:153712349-153712720 chr2:153662752-153663675 chr2:153677249-153678021 chr2:153673913-153684571 chr2:153711673-153714107 chr2:153675155-153693945 chr2:153675264-153675921 chr2:153674922-153678015 |
|
| Enhancer: |
chr2:153169630-153171350 chr2:153171090-153171350 chr2:153172120-153172470 chr2:153318230-153318650 chr2:153319700-153320900 chr2:153340780-153341030 chr2:153409400-153409770 chr2:153433920-153434270 chr2:153436220-153437100 chr2:153368800-153369060 chr2:153353540-153354830 chr2:153373540-153376290 chr2:153318840-153321030 chr2:153433500-153434400 chr2:153170850-153171350 chr2:153172120-153172370 chr2:153248930-153249190 chr2:153251340-153252330 chr2:153269910-153270090 chr2:153309570-153310380 chr2:153317340-153318150 chr2:153318240-153318650 chr2:153319700-153320330 chr2:153334830-153335730 chr2:153373920-153374650 chr2:153426700-153426960 chr2:153436250-153437160 chr2:153538100-153539560 chr2:153100210-153106550 chr2:153159120-153161870 chr2:153168600-153171350 chr2:153172120-153177920 chr2:153317230-153324360 chr2:153346240-153355170 chr2:153318240-153321070 chr2:153346170-153353500 chr2:153159530-153161870 chr2:153169790-153171350 chr2:153172120-153173880 chr2:153218670-153219080 chr2:153219230-153219350 chr2:153219520-153219610 chr2:153219710-153220220 chr2:153262080-153263640 chr2:153268130-153270090 chr2:153279810-153282710 chr2:153300350-153303600 chr2:153309570-153311500 chr2:153417210-153420160 chr2:153684240-153684690 chr2:153684860-153686320 chr2:153686430-153687160 chr2:153727280-153727630 chr2:153727740-153728360 chr2:153728470-153728710 chr2:153728810-153729680 chr2:153729780-153730220 chr2:153770590-153771920 chr2:153785440-153787250 chr2:153787320-153789310 chr2:153789580-153790680 chr2:153350650-153355170 chr2:153169920-153171350 chr2:153172120-153173830 chr2:153219710-153220310 chr2:153256500-153261940 chr2:153262080-153263850 chr2:153267140-153270090 chr2:153278180-153282270 chr2:153294210-153296420 chr2:153296530-153303600 chr2:153365700-153378100 chr2:153378370-153383540 chr2:153416800-153420420 chr2:153726320-153727630 chr2:153350440-153355170 chr2:153104000-153104810 chr2:153170140-153171350 chr2:153172120-153177540 chr2:153249860-153250790 chr2:153317280-153321010 chr2:153368190-153371510 chr2:153350980-153355170 chr2:153175280-153177120 chr2:153432980-153435110 chr2:153369520-153370670 chr2:153265910-153269810 chr2:153294030-153296420 chr2:153318370-153318750 chr2:153334170-153336390 chr2:153344930-153349780 chr2:153417880-153419770 chr2:153438040-153439370 chr2:153631030-153631870 chr2:153651740-153652090 chr2:153351000-153353950 chr2:153317030-153320840 chr2:153408510-153410810 chr2:153651650-153652400 chr2:153651310-153652480 chr2:153170620-153171350 chr2:153172120-153172920 chr2:153267680-153270090 chr2:153308390-153309420 chr2:153309570-153310440 chr2:153316630-153320960 chr2:153436310-153437320 chr2:153352440-153355170 chr2:153308200-153309420 chr2:153170780-153171350 chr2:153172120-153173150 chr2:153011380-153012990 chr2:153013160-153013260 chr2:153019640-153020010 chr2:153020140-153021040 chr2:153021120-153021220 chr2:153252500-153261940 chr2:153262080-153265890 chr2:153277530-153285080 chr2:153292330-153296420 chr2:153333680-153339530 chr2:153365700-153378170 chr2:153392650-153396600 chr2:153397120-153410720 chr2:153548080-153551830 chr2:153123350-153126010 chr2:153249730-153252420 chr2:153252530-153261940 chr2:153262080-153265090 chr2:153267480-153270090 chr2:153278280-153282770 chr2:153316340-153325370 chr2:153345110-153355170 chr2:153371420-153373730 chr2:153393180-153395460 chr2:153398400-153410720 chr2:153170930-153171350 chr2:153340520-153341130 chr2:153368980-153370720 chr2:153130770-153131520 chr2:153170400-153171350 chr2:153172120-153174660 chr2:153175200-153177850 chr2:153257180-153261940 chr2:153262080-153264290 chr2:153265830-153270090 chr2:153279860-153282720 chr2:153293600-153296420 chr2:153296530-153296610 chr2:153299130-153303340 chr2:153316700-153324060 chr2:153350500-153355170 chr2:153170310-153171350 chr2:153172120-153173520 chr2:153249380-153255520 chr2:153257150-153261940 chr2:153262080-153265300 chr2:153316420-153321070 chr2:153350370-153355170 chr2:153299540-153303160 chr2:153316370-153323800 chr2:153373640-153375990 chr2:153350920-153355170 chr2:153170090-153171350 chr2:153262080-153263870 chr2:153268290-153270090 chr2:153297430-153303600 chr2:153316410-153320940 chr2:153433210-153434330 chr2:153170670-153171350 chr2:153172120-153172980 chr2:153251080-153253490 chr2:153267960-153270090 chr2:153282880-153284390 chr2:153308420-153309420 chr2:153309570-153309990 chr2:153317230-153319210 chr2:153320130-153320760 chr2:153334600-153336250 chr2:153373820-153374310 chr2:153436300-153437460 chr2:153351390-153355170 chr2:153269350-153270090 chr2:153343910-153355170 chr2:153370860-153376470 chr2:153170190-153171350 chr2:153172120-153173610 chr2:153175900-153177200 chr2:153249680-153252300 chr2:153262080-153263720 chr2:153266100-153267240 chr2:153269180-153270090 chr2:153306910-153309420 chr2:153309570-153310760 chr2:153317330-153320950 chr2:153371540-153376120 chr2:153417620-153419410 chr2:153433210-153434370 chr2:153247740-153261940 chr2:153262080-153265400 chr2:153265600-153270090 chr2:153317380-153320910 chr2:153408450-153410510 chr2:153416800-153420000 chr2:153255600-153261940 chr2:153262080-153264400 chr2:153309570-153312200 chr2:153318800-153324200 chr2:153347200-153349600 chr2:153351400-153353400 chr2:153172120-153173230 chr2:153258000-153261940 chr2:153262080-153263820 chr2:153265910-153270090 chr2:153282920-153284930 chr2:153294580-153296420 chr2:153296530-153297150 chr2:153300140-153302360 chr2:153308990-153309420 chr2:153318670-153320920 chr2:153334440-153335800 chr2:153436290-153437250 chr2:153353020-153355050 chr2:153262080-153263960 chr2:153265800-153270090 chr2:153436310-153437430 chr2:153438280-153439040 chr2:153278100-153283020 chr2:153300320-153303600 chr2:153313780-153318200 chr2:153318320-153318660 chr2:153366900-153376500 chr2:153391040-153395420 chr2:153402420-153410830 chr2:153169980-153171350 chr2:153172120-153175010 chr2:153175190-153177460 chr2:153251350-153252340 chr2:153260370-153261940 chr2:153262080-153264420 chr2:153265860-153270090 chr2:153279780-153282650 chr2:153299490-153301990 chr2:153308220-153309420 chr2:153309570-153310290 chr2:153315230-153324790 chr2:153334760-153336370 chr2:153538350-153539350 chr2:153349550-153355170 chr2:153144830-153145580 chr2:153175240-153177650 chr2:153248160-153249150 chr2:153253520-153255870 chr2:153261090-153261940 chr2:153262080-153264160 chr2:153266350-153267960 chr2:153270210-153271800 chr2:153300550-153301800 chr2:153309250-153309420 chr2:153318650-153319470 chr2:153436170-153437370 chr2:153306820-153309420 chr2:153373120-153376270 chr2:153433020-153435150 chr2:153436240-153437990 chr2:153368180-153373050 chr2:153262280-153263090 chr2:153279380-153280380 chr2:153308590-153309420 chr2:153316050-153322850 chr2:153335020-153336360 chr2:153346920-153347670 chr2:153372380-153376280 chr2:153393580-153395180 chr2:153408130-153410720 chr2:153423240-153424020 chr2:153426720-153427040 chr2:153500780-153501460 chr2:153502570-153502900 chr2:153502990-153503240 chr2:153503390-153504040 chr2:153547040-153547320 chr2:153368800-153371400 chr2:153501540-153502430 chr2:153550110-153550990 chr2:153350410-153355170 chr2:153368500-153371800 chr2:153170490-153171350 chr2:153175280-153177660 chr2:153433020-153434450 chr2:153366940-153370870 chr2:153170430-153171350 chr2:153172120-153174790 chr2:153248220-153255280 chr2:153257270-153261940 chr2:153262080-153264410 chr2:153268230-153270090 chr2:153307960-153309420 chr2:153309570-153310470 chr2:153316830-153321060 chr2:153373520-153375450 chr2:153417900-153419440 chr2:153495760-153496030 chr2:153496180-153496550 chr2:153537310-153539620 chr2:153650210-153650690 chr2:153337520-153338680 chr2:153123900-153125210 chr2:153340730-153341140 chr2:153294280-153296420 chr2:153296530-153297090 chr2:153306950-153308270 chr2:153318230-153319950 chr2:153346750-153350200 chr2:153408130-153409810 chr2:153433050-153434450 chr2:153337310-153339340 chr2:153366300-153370000 chr2:153350790-153353970 chr2:153426740-153427670 chr2:153123950-153125000 chr2:153250130-153252300 chr2:153259260-153261940 chr2:153262080-153263670 chr2:153266450-153267170 chr2:153268300-153270090 chr2:153318380-153319720 chr2:153417830-153418630 chr2:153426780-153427100 chr2:153538680-153539290 chr2:153353760-153355130 chr2:153122740-153124430 chr2:153172120-153173140 chr2:153270460-153272100 chr2:153315270-153319330 chr2:153319540-153320280 chr2:153426740-153427410 chr2:153651740-153652020 chr2:153695990-153696660 chr2:153293810-153296420 chr2:153318780-153323620 chr2:153367920-153371430 chr2:153349330-153355170 chr2:153172120-153173500 chr2:153175100-153177390 chr2:153318080-153321080 chr2:153367860-153371380 chr2:153352630-153355170 chr2:153317100-153318150 chr2:153350960-153354770 chr2:153318270-153318720 chr2:153319390-153320990 chr2:153169870-153171350 chr2:153172120-153172940 chr2:153345050-153349200 chr2:153371540-153375900 chr2:153408120-153410610 chr2:153437410-153439320 chr2:153270210-153270790 chr2:153318260-153319180 chr2:153375250-153375660 chr2:153410120-153410570 chr2:153423510-153423900 chr2:153437270-153437910 chr2:153438280-153438750 chr2:153353550-153354270 |
|
| Promoter: |
chr2:153647448-153651448 |
ChIP-seq based regulatory details of Dnmt3b
| Sample ID | Experiment target | Biosample term name | Cell type | Tissue type | Source |
|---|---|---|---|---|---|
| TcoF_01_21166 | Dnmt3b | CD-1 | Enteric precursor cells | ganglionic gut | Cistrome |
| TcoF_01_21165 | Dnmt3b | CD-1 | Enteric precursor cells | ganglionic gut | Cistrome |
| TcoF_01_21164 | Dnmt3b | CD-1 | Enteric precursor cells | ganglionic gut | Cistrome |
| TcoF_01_21163 | Dnmt3b | CD-1 | Enteric precursor cells | ganglionic gut | Cistrome |
| TcoF_01_21161 | Dnmt3b | CD-1 | Enteric precursor cells | ganglionic gut | Cistrome |
| TcoF_01_21159 | Dnmt3b | CD-1 | Enteric precursor cells | ganglionic gut | Cistrome |
| TcoF_01_21158 | Dnmt3b | CD-1 | Enteric precursor cells | ganglionic gut | Cistrome |
| TcoF_01_21157 | Dnmt3b | CD-1 | Enteric precursor cells | ganglionic gut | Cistrome |
| TcoF_01_21156 | Dnmt3b | CD-1 | Enteric precursor cells | ganglionic gut | Cistrome |
| TcoF_01_21155 | Dnmt3b | CD-1 | Enteric precursor cells | ganglionic gut | Cistrome |
| TcoF_01_21154 | Dnmt3b | CD-1 | Enteric precursor cells | ganglionic gut | Cistrome |
| TcoF_01_21153 | Dnmt3b | CD-1 | Enteric precursor cells | ganglionic gut | Cistrome |
| TcoF_01_21152 | Dnmt3b | E14 | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_21151 | Dnmt3b | E14 | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_21150 | Dnmt3b | E14 | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_21149 | Dnmt3b | E14 | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_21148 | Dnmt3b | E14 | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_21147 | Dnmt3b | E14 | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_21146 | Dnmt3b | E14 | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_21145 | Dnmt3b | E14 | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_21143 | Dnmt3b | E14 | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_21142 | Dnmt3b | E14 | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_21141 | Dnmt3b | E14 | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_21140 | Dnmt3b | E14 | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_21139 | Dnmt3b | None | Embryonic Stem Cell | None | Cistrome |
| TcoF_01_21138 | Dnmt3b | None | Embryonic Stem Cell | None | Cistrome |
Downstream target genes of Dnmt3b
Protein-protein interaction of Dnmt3b
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| Dnmt3b | E2f6 | Co-localization | 20439742 | 10090 | 10090 | BIOGRID |
| Dnmt3b | Nr6a1 | Affinity Capture-Western | 16631596 | 10090 | 10090 | BIOGRID |
| Dnmt3b | Cbx2 | Affinity Capture-Western | 17726103 | 10090 | 10090 | BIOGRID |
| Dnmt3b | Bmi1 | Affinity Capture-Western | 17726103 | 10090 | 10090 | BIOGRID |
| Dnmt3b | Pcgf2 | Affinity Capture-Western | 17726103 | 10090 | 10090 | BIOGRID |
| Dnmt3b | Ehmt2 | Affinity Capture-Western | 18953337 | 10090 | 10090 | BIOGRID |
| Dnmt3b | Dnmt3a | Co-purification | 17938196 | 10090 | 10090 | BIOGRID |
| Dnmt3b | Dnmt3a | Co-fractionation | 17938196 | 10090 | 10090 | BIOGRID |
| Dnmt3b | Dnmt3l | Co-fractionation | 17938196 | 10090 | 10090 | BIOGRID |
Annotation of Dnmt3b
Expression of Dnmt3b
Disease information of Dnmt3b