TcoF overview
TcoF: Kdm4a
GeneID: 230674
Name: Lysine-specific demethylase 4A
Ensembl: ENSMUSG00000033326
Species: Mouse
Class: class 3
Family: Lysine demethylase
Disease: --
Go-trem: 24
Pathway: 14
Super Enhancer:

chr4:118142929-118153309 chr4:118105025-118110557 chr4:118172434-118173409 chr4:118138783-118153525 chr4:118138570-118153049 chr4:118137184-118158288 chr4:118112170-118123513 chr4:118142805-118153070 chr4:118172093-118173540 chr4:118137237-118157082 chr4:118101765-118109632 chr4:118138346-118140528 chr4:118122713-118124175 chr4:118122466-118124208 chr4:118137363-118138873 chr4:118122127-118122737 chr4:118108880-118130706 chr4:118144080-118153557 chr4:118143762-118144586 chr4:118122848-118123405 chr4:118137249-118152520 chr4:118121961-118123785 chr4:118105027-118106136 chr4:118108731-118109907 chr4:118099142-118111119 chr4:118127122-118155833 chr4:118138156-118150726 chr4:118167125-118173896 chr4:118165708-118177857 chr4:118122885-118127913 chr4:118143049-118154259 chr4:118172311-118173477 chr4:118122970-118124106 chr4:118143471-118144972 chr4:118172151-118173189 chr4:118115956-118116758 chr4:118137478-118138325 chr4:118105018-118110221 chr4:118122856-118123407 chr4:118105186-118110056 chr4:118122943-118123402 chr4:118101307-118155520

Enhancer:

chr4:117276100-117281480 chr4:117312680-117315500 chr4:117508080-117510650 chr4:117564030-117564310 chr4:117578180-117584370 chr4:117585110-117586890 chr4:117645720-117654100 chr4:117668700-117675500 chr4:117687400-117692920 chr4:117802450-117806990 chr4:117811590-117814640 chr4:117850180-117852490 chr4:118032990-118034120 chr4:118108990-118109110 chr4:118118750-118118950 chr4:118119110-118121150 chr4:118121290-118121480 chr4:118121660-118123050 chr4:117537900-117539980 chr4:118081990-118082470 chr4:117726230-117727250 chr4:117727300-117727870 chr4:117794760-117796870 chr4:117559240-117559770 chr4:118081360-118081760 chr4:118081990-118083300 chr4:117317200-117319930 chr4:117508820-117509130 chr4:117581430-117582010 chr4:117851880-117852490 chr4:117937840-117939010 chr4:118032990-118033170 chr4:117521580-117522450 chr4:117586320-117586890 chr4:117851630-117852490 chr4:118081300-118081760 chr4:117508080-117510000 chr4:117558470-117558670 chr4:117850890-117852490 chr4:118032830-118032910 chr4:118032990-118033500 chr4:118080300-118081760 chr4:118081990-118083480 chr4:118108770-118108860 chr4:117851590-117852490 chr4:117927790-117930090 chr4:117930280-117938180 chr4:117958830-117963500 chr4:118080820-118081760 chr4:118081990-118083160 chr4:117508080-117511540 chr4:118032990-118033830 chr4:118080880-118081760 chr4:117508080-117510250 chr4:117519060-117528470 chr4:117528630-117529290 chr4:117529420-117529610 chr4:117567260-117567340 chr4:117567530-117567810 chr4:117567900-117568020 chr4:117568080-117568160 chr4:117568230-117570370 chr4:117576130-117576290 chr4:117576320-117576400 chr4:117576580-117576980 chr4:117577120-117577210 chr4:117577330-117577500 chr4:117577670-117577780 chr4:117577920-117578040 chr4:117597600-117598760 chr4:117601850-117601990 chr4:117687540-117690220 chr4:117805950-117806990 chr4:117815150-117816500 chr4:117816680-117816970 chr4:117818740-117819160 chr4:117819240-117819600 chr4:117819800-117821280 chr4:117821470-117825790 chr4:117825910-117831030 chr4:117850700-117852490 chr4:117668810-117671560 chr4:117817080-117818680 chr4:117570420-117571800 chr4:117583350-117584370 chr4:117599670-117599760 chr4:117669070-117673620 chr4:117687580-117690600 chr4:117806330-117806990 chr4:117825910-117830690 chr4:117850910-117852490 chr4:117932040-117939680 chr4:117943740-117949950 chr4:117950080-117950450 chr4:117960960-117963780 chr4:118034330-118034470 chr4:118034550-118034640 chr4:118034690-118034790 chr4:118080490-118081760 chr4:118081990-118083010 chr4:118109440-118109540 chr4:118117510-118118650 chr4:118119110-118119860 chr4:117806820-117806990 chr4:117815480-117816500 chr4:117821470-117823320 chr4:117734290-117735770 chr4:117817080-117818230 chr4:117852370-117852490 chr4:117557240-117557700 chr4:117558280-117558400 chr4:117578600-117584370 chr4:117654300-117656220 chr4:117680370-117682290 chr4:117803900-117806990 chr4:117812360-117814640 chr4:117850510-117852490 chr4:118080170-118081760 chr4:117687400-117688740 chr4:117725830-117727250 chr4:117851520-117852490 chr4:117864010-117864950 chr4:117851670-117852490 chr4:117750120-117753500 chr4:117780970-117783540 chr4:117851720-117852490 chr4:117749000-117749840 chr4:117852380-117852490 chr4:117944170-117946480 chr4:117508080-117509770 chr4:117562530-117562620 chr4:117806500-117806990 chr4:117851580-117852490 chr4:117931400-117936100 chr4:118032990-118033690 chr4:118081990-118082740 chr4:118102430-118103100 chr4:118103160-118103310 chr4:118214970-118215200 chr4:117851540-117852490 chr4:117945780-117949950 chr4:117950080-117951520 chr4:117961470-117963780 chr4:117709580-117714770 chr4:117806710-117806990 chr4:117851530-117852490 chr4:117945090-117949950 chr4:117962000-117963780 chr4:117999030-117999650 chr4:118081990-118082720 chr4:117280780-117286350 chr4:117306100-117310230 chr4:117315980-117321910 chr4:117323820-117328720 chr4:117508080-117515180 chr4:117524460-117528470 chr4:117542430-117542510 chr4:117542590-117542710 chr4:117542780-117543120 chr4:117543170-117543660 chr4:117543790-117544350 chr4:117544460-117544590 chr4:117544780-117544990 chr4:117557890-117558230 chr4:117562280-117562350 chr4:117583600-117584370 chr4:117599900-117600220 chr4:117750670-117755190 chr4:117821470-117822090 chr4:117850600-117852490 chr4:118074090-118075000 chr4:118075170-118075420 chr4:118079100-118081760 chr4:118083600-118084130 chr4:118103510-118103660 chr4:118103740-118103870 chr4:118103920-118104010 chr4:118104110-118104200 chr4:118104330-118104500 chr4:118105740-118106080 chr4:118106200-118107350 chr4:118107480-118108070 chr4:118108300-118108380 chr4:118108470-118108570 chr4:117751090-117755340 chr4:117806230-117806990 chr4:117821470-117822540 chr4:117850500-117852490 chr4:117559260-117559770 chr4:117655240-117655690 chr4:118081670-118081760 chr4:118081990-118082320 chr4:117539050-117540200 chr4:117817080-117817520 chr4:117508080-117509330 chr4:117937570-117940000 chr4:118102430-118102930 chr4:117669280-117671610 chr4:117508080-117509320 chr4:117950080-117950660 chr4:117580650-117582180 chr4:117655260-117655840 chr4:117704480-117704650 chr4:117722130-117722470 chr4:117730820-117735600 chr4:117755840-117757050 chr4:117821960-117823290 chr4:117851480-117852490 chr4:117868660-117869210 chr4:117942220-117943540 chr4:117944550-117947650 chr4:117962600-117963780 chr4:118032990-118033780 chr4:118066630-118068610 chr4:118080780-118081760 chr4:118119110-118119940 chr4:118314810-118315900 chr4:117555230-117555700 chr4:117669820-117670760 chr4:117655240-117655760 chr4:117852390-117852490 chr4:117851680-117852490 chr4:117937660-117939240 chr4:117950080-117951170 chr4:117961310-117963780 chr4:117927760-117928490 chr4:118081990-118082380 chr4:117897730-117898400 chr4:117904390-117907560 chr4:117907700-117908150 chr4:117916330-117921500 chr4:117921610-117930090 chr4:117930280-117939300 chr4:117637020-117640990 chr4:117508080-117510400 chr4:117672180-117674920 chr4:117701260-117702140 chr4:117704480-117704810 chr4:117714880-117718290 chr4:117806860-117806990 chr4:117851620-117852490 chr4:117887230-117888390 chr4:117906060-117907560 chr4:117908290-117908510 chr4:117912510-117914250 chr4:117930280-117931990 chr4:117937020-117939400 chr4:117941240-117941780 chr4:117941920-117942080 chr4:117950080-117951160 chr4:117961320-117963780 chr4:118004000-118004940 chr4:118037850-118037950 chr4:118038070-118038230 chr4:118068970-118070210 chr4:117669050-117671850 chr4:117817080-117817980 chr4:117508080-117515620 chr4:117653200-117657400 chr4:117669200-117676480 chr4:117724560-117727250 chr4:117727300-117728200 chr4:117783400-117794000 chr4:117794200-117798400 chr4:117798600-117806990 chr4:117905400-117907560 chr4:117912200-117916200 chr4:117921800-117930090 chr4:117930280-117936200 chr4:117950080-117952200 chr4:117957450-117963780 chr4:117998000-118000000 chr4:118032990-118034220 chr4:118080800-118081760 chr4:118081990-118083400 chr4:118117800-118118650 chr4:118119110-118120400 chr4:118187000-118189870 chr4:117944800-117949950 chr4:117950080-117951200 chr4:117087260-117088850 chr4:117106820-117108050 chr4:117152390-117154130 chr4:117166270-117169280 chr4:117273290-117274660 chr4:117277460-117279160 chr4:117285200-117286780 chr4:117287840-117288590 chr4:117295780-117297170 chr4:117317260-117321910 chr4:117322010-117322810 chr4:117323880-117325650 chr4:117326030-117328700 chr4:117508080-117510020 chr4:117519250-117520460 chr4:117615170-117616600 chr4:117672230-117674430 chr4:117712620-117714690 chr4:117727300-117728020 chr4:117729800-117733270 chr4:117749910-117750890 chr4:117851820-117852490 chr4:117928710-117930090 chr4:117937720-117939170 chr4:117945180-117949950 chr4:117961450-117963780 chr4:118032990-118033860 chr4:118081990-118083020 chr4:118117870-118118650 chr4:118119110-118119580 chr4:118149410-118150080 chr4:118188960-118189870 chr4:117554420-117555700 chr4:117669280-117671280 chr4:117106820-117107980 chr4:117285360-117286510 chr4:117317490-117318760 chr4:117508080-117509360 chr4:117709800-117710900 chr4:117712810-117714540 chr4:117715420-117716650 chr4:117726660-117727250 chr4:117727300-117728120 chr4:117730080-117732160 chr4:117749960-117751160 chr4:117806340-117806990 chr4:117851740-117852490 chr4:117961590-117963780 chr4:117999000-117999810 chr4:118032990-118033490 chr4:118081990-118083180 chr4:117554710-117555700 chr4:117669300-117671140 chr4:117852260-117852490 chr4:118081460-118081760 chr4:117704480-117704640 chr4:117709570-117711390 chr4:117721460-117723140 chr4:117729830-117732440 chr4:117749900-117751000 chr4:117780750-117782920 chr4:117851610-117852490 chr4:117941320-117941780 chr4:117950080-117950720 chr4:117961520-117963780 chr4:117669380-117671120 chr4:117852240-117852490 chr4:117945200-117946530 chr4:118081990-118082950 chr4:117508080-117510410 chr4:117585430-117586890 chr4:117655370-117656200 chr4:117687890-117689880 chr4:117701250-117703450 chr4:117703820-117704440 chr4:117721800-117722560 chr4:117730780-117731710 chr4:117937030-117939810 chr4:117941060-117941780 chr4:117961500-117963780 chr4:118004480-118004880 chr4:118032990-118033610 chr4:118069100-118069980 chr4:118070860-118071340 chr4:118081120-118081760 chr4:118118120-118118650 chr4:118119180-118119720 chr4:118215360-118215960 chr4:117538820-117539330 chr4:117669790-117671240 chr4:117733560-117735680 chr4:117570640-117571020 chr4:117564160-117564310 chr4:117605740-117608100 chr4:117668540-117674980 chr4:117687400-117692490 chr4:117740880-117744250 chr4:117794820-117796770 chr4:117805360-117806990 chr4:117850520-117852490 chr4:117940040-117941780 chr4:117997540-118000410 chr4:118003260-118006010 chr4:118081540-118081760 chr4:117733590-117735410 chr4:117099350-117101710 chr4:117281920-117285580 chr4:117287020-117287770 chr4:117287840-117288180 chr4:117294740-117295870 chr4:117306680-117308000 chr4:117319080-117319750 chr4:117384650-117385430 chr4:117459480-117460120 chr4:117478900-117480450 chr4:117510720-117511350 chr4:117586290-117586890 chr4:117658710-117660800 chr4:117715330-117717540 chr4:117753870-117754780 chr4:117772130-117772550 chr4:117781910-117783080 chr4:117787380-117788220 chr4:117795530-117795950 chr4:117798840-117799170 chr4:117806400-117806990 chr4:117824460-117825540 chr4:117826960-117828360 chr4:117850940-117852490 chr4:117863800-117864970 chr4:117652710-117653930 chr4:117733520-117734500 chr4:117800080-117801010 chr4:117817080-117817940 chr4:117559330-117559770 chr4:117817080-117817820 chr4:117806210-117806990 chr4:117850860-117852490 chr4:118080430-118081760 chr4:117508080-117510310 chr4:117519230-117520240 chr4:117526910-117528470 chr4:117581190-117582470 chr4:117585300-117586890 chr4:117688120-117690590 chr4:117691130-117693050 chr4:117851650-117852490 chr4:117944180-117949950 chr4:117950080-117951340 chr4:118032990-118033630 chr4:118081310-118081760 chr4:118081990-118082530 chr4:118118320-118118650 chr4:118119110-118119790 chr4:118186120-118186600 chr4:117521290-117523210 chr4:117538100-117539780 chr4:117580470-117582240 chr4:117730800-117733080 chr4:117852360-117852490 chr4:117917550-117919050 chr4:117518960-117520830 chr4:117795420-117796720 chr4:117912550-117913560 chr4:117919760-117920450 chr4:117670050-117670600 chr4:117794890-117796650 chr4:117936780-117939960 chr4:117944510-117947950 chr4:117654560-117656230 chr4:117815780-117816500 chr4:117821530-117824030 chr4:117824040-117825790 chr4:117851570-117852490 chr4:117652860-117653290 chr4:117817080-117817920 chr4:117816150-117816500 chr4:117817080-117818130 chr4:117508080-117515230 chr4:117522030-117528330 chr4:117577410-117577500 chr4:117644950-117654080 chr4:117654230-117668990 chr4:117671990-117674430 chr4:117726070-117727250 chr4:117727300-117728130 chr4:117794690-117797360 chr4:117799000-117800980 chr4:117820110-117821280 chr4:117821470-117822030 chr4:117827520-117830470 chr4:117912380-117915170 chr4:117924780-117930090 chr4:117930280-117936320 chr4:117940340-117941780 chr4:117950080-117955720 chr4:117957450-117963480 chr4:118032990-118033900 chr4:118081380-118081760 chr4:118084170-118084260 chr4:118084400-118084490 chr4:118103740-118103800 chr4:118183010-118186650 chr4:118212150-118213540 chr4:118216100-118216200 chr4:117538020-117540360 chr4:117637020-117639130 chr4:117669020-117671820 chr4:117559420-117559770 chr4:117564130-117564310 chr4:117851660-117852490 chr4:117918300-117918970 chr4:117962790-117963780 chr4:118032990-118033560 chr4:118081340-118081760 chr4:118081990-118082780 chr4:118117590-118118650 chr4:118119110-118119500 chr4:117546600-117546690 chr4:117564220-117564310 chr4:117806470-117806990 chr4:118081370-118081760 chr4:118083600-118083780 chr4:118107030-118107350 chr4:117824440-117825540 chr4:117851850-117852490 chr4:117817080-117817860 chr4:117509440-117510340 chr4:117655190-117656090 chr4:117659060-117659720 chr4:117691830-117692410 chr4:117730730-117733290 chr4:117781370-117782720 chr4:117795720-117796370 chr4:117912500-117914010 chr4:117918480-117919280 chr4:117937960-117938910 chr4:117950080-117951320 chr4:117961060-117963780 chr4:118081990-118082550 chr4:118119110-118119740 chr4:117554750-117555700 chr4:117669440-117671300 chr4:117733530-117735360 chr4:117508180-117509640 chr4:117851950-117852490 chr4:118081640-118081760 chr4:117744190-117744940 chr4:117768410-117769910 chr4:117559670-117559770 chr4:117679630-117682840 chr4:117851700-117852490 chr4:117680610-117681720 chr4:117851860-117852490 chr4:118081500-118081760 chr4:117851910-117852490 chr4:117722150-117722970 chr4:117730540-117731920 chr4:117851710-117852490 chr4:118035100-118035180 chr4:118081560-118081760 chr4:118081990-118082340 chr4:117538590-117539150 chr4:117637020-117637650 chr4:117669900-117670970 chr4:117733540-117735370 chr4:117688170-117688830 chr4:117691200-117693080 chr4:117726200-117727250 chr4:117886920-117888490 chr4:117961580-117963780 chr4:117637020-117638730 chr4:117655280-117656080 chr4:117851870-117852490 chr4:117508080-117509480 chr4:117559300-117559770 chr4:117688180-117688680 chr4:117691740-117692650 chr4:117726360-117726980 chr4:117851960-117852490 chr4:117637040-117637540 chr4:117670220-117670690

Promoter:

chr4:118178043-118182043

 ChIP-seq based regulatory details of Kdm4a
Sample ID Experiment target Biosample term name Cell type Tissue type Source
TcoF_01_20660 Kdm4a None None Uterus Cistrome
TcoF_01_20659 Kdm4a None None Uterus Cistrome
TcoF_01_20658 Kdm4a None None Uterus Cistrome
TcoF_01_20447 Kdm4a None Embryonic Stem Cell None Cistrome
TcoF_01_20446 Kdm4a None Embryonic Stem Cell None Cistrome
TcoF_01_20435 Kdm4a None Granulocyte Monocyte Progenitor None Cistrome
TcoF_01_20434 Kdm4a None Granulocyte Monocyte Progenitor None Cistrome
TcoF_01_20256 Kdm4a 3T3-L1 Preadipocyte Adipose Cistrome
TcoF_01_20255 Kdm4a 3T3-L1 Preadipocyte Adipose Cistrome
TcoF_01_20080 Kdm4a None Dendritic Cell None Cistrome
 Downstream target genes of Kdm4a
 Upstream regulatory details of Kdm4a
 Protein-protein interaction of Kdm4a
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
Kdm4a Esr1 Affinity Capture-Western 21445275 10090 10090 BIOGRID
Kdm4a Pbrm1 Affinity Capture-Western 21445275 10090 10090 BIOGRID
Kdm4a Smarca4 Affinity Capture-Western 21445275 10090 10090 BIOGRID
Kdm4a Arid1b Affinity Capture-Western 21445275 10090 10090 BIOGRID
 Annotation of Kdm4a
 Disease information of Kdm4a