TcoF overview
| TcoF: | Kdm6a | |
| GeneID: | 22289 | |
| Name: | Lysine-specific demethylase 6A | |
| Ensembl: | ENSMUSG00000037369 | |
| Species: | Mouse | |
| Class: | NA | |
| Family: | Lysine demethylase | |
| Disease: | -- | |
| Go-trem: | 30 | |
| Pathway: | 31 | |
| Super Enhancer: | chrX:18185800-18191530 chrX:18258189-18259495 chrX:18254043-18254783 chrX:18326234-18326894 chrX:18315071-18315901 chrX:18243146-18243419 chrX:18279948-18280847 chrX:18314778-18315431 |
|
| Enhancer: |
chrX:17740290-17740500 chrX:17740570-17745800 chrX:17740570-17740900 chrX:17756680-17756960 chrX:17740570-17741780 chrX:17740570-17741300 chrX:17740570-17741010 chrX:17740570-17741000 chrX:17740570-17741980 chrX:17740570-17741750 chrX:17740570-17741960 chrX:17740570-17742290 chrX:17740570-17742770 chrX:17835090-17837210 chrX:17740570-17742170 chrX:17835090-17836940 chrX:17740570-17742300 chrX:17740290-17740440 chrX:17740570-17742560 chrX:17762080-17765850 chrX:17740570-17742370 chrX:17756350-17758670 chrX:17740570-17741950 chrX:17740570-17742090 chrX:17740570-17741020 chrX:17740570-17741390 chrX:17740570-17741560 chrX:17740570-17743080 chrX:17740570-17742060 chrX:17740570-17741380 chrX:17740570-17741320 chrX:17740570-17741590 chrX:17827720-17827830 chrX:17740570-17743000 chrX:17740570-17741210 chrX:17740570-17741670 chrX:17740570-17741820 chrX:17740570-17741660 chrX:17740570-17741760 chrX:17756450-17757730 chrX:17763070-17764920 chrX:17759010-17760370 chrX:17740570-17741790 chrX:17740570-17741890 chrX:17740570-17741800 chrX:17740570-17741830 chrX:17740570-17741510 chrX:17740570-17741810 chrX:17763930-17764630 chrX:17740570-17741720 chrX:17740570-17741090 chrX:17740570-17741740 chrX:17740570-17741080 chrX:17740570-17741850 chrX:17756490-17757050 chrX:17740570-17741420 chrX:17740570-17741600 |
|
| Promoter: |
chrX:18160666-18164666 |
ChIP-seq based regulatory details of Kdm6a
| Sample ID | Experiment target | Biosample term name | Cell type | Tissue type | Source |
|---|---|---|---|---|---|
| TcoF_01_21742 | Kdm6a | None | Epithelium | intestinal villus | Cistrome |
| TcoF_01_21741 | Kdm6a | None | Epithelium | intestinal villus | Cistrome |
| TcoF_01_21740 | Kdm6a | None | Epithelium | intestinal villus | Cistrome |
| TcoF_01_21739 | Kdm6a | None | Epithelium | intestinal villus | Cistrome |
| TcoF_01_21738 | Kdm6a | None | Epithelium | intestinal villus | Cistrome |
| TcoF_01_21737 | Kdm6a | E14Tg2A | Embryonic Stem Cell | None | Cistrome |
| TcoF_01_21736 | Kdm6a | E8.5 | None | Cranial | Cistrome |
| TcoF_01_21735 | Kdm6a | None | Embryonic Stem Cell | None | Cistrome |
| TcoF_01_21734 | Kdm6a | None | None | Mammary Gland | Cistrome |
| TcoF_01_21733 | Kdm6a | None | None | Mammary Gland | Cistrome |
| TcoF_01_21732 | Kdm6a | None | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_21731 | Kdm6a | None | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_21730 | Kdm6a | C2C12 | Myoblast | Muscle | Cistrome |
| TcoF_01_21729 | Kdm6a | C2C12 | Myoblast | Muscle | Cistrome |
| TcoF_01_21728 | Kdm6a | C2C12 | Myoblast | Muscle | Cistrome |
| TcoF_01_21727 | Kdm6a | V6.5 | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_21726 | Kdm6a | None | Fibroblast | Embryo | Cistrome |
| TcoF_01_21725 | Kdm6a | None | Fibroblast | Embryo | Cistrome |
Downstream target genes of Kdm6a
Protein-protein interaction of Kdm6a
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| Kdm6a | Ash2l | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Kdm6a | Kmt2a | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Kdm6a | Kmt2d | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Kdm6a | Rbbp5 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
Annotation of Kdm6a
Expression of Kdm6a
Disease information of Kdm6a