TcoF overview
TcoF: Kdm6b
GeneID: 216850
Name: Lysine-specific demethylase 6B
Ensembl: ENSMUSG00000018476
Species: Mouse
Class: class HC
Family: Lysine demethylase
Disease: --
Go-trem: 26
Pathway: 3
Super Enhancer:

chr11:69416946-69420368 chr11:69417541-69430109 chr11:69416355-69420605 chr11:69416357-69420049 chr11:69417832-69420287 chr11:69416360-69420342 chr11:69416362-69420347 chr11:69416369-69419500 chr11:69408606-69411307 chr11:69423237-69424884 chr11:69401389-69402125 chr11:69442433-69444519 chr11:69428892-69429855 chr11:69408983-69419427 chr11:69416372-69420123 chr11:69416392-69421054 chr11:69416412-69429554 chr11:69443253-69444152 chr11:69416999-69424647 chr11:69443295-69444191 chr11:69416584-69433789 chr11:69417141-69419395 chr11:69432050-69452622 chr11:69408369-69419868 chr11:69417173-69429849 chr11:69416858-69419916 chr11:69417334-69418473

Enhancer:

chr11:68886790-68892020 chr11:69177640-69178190 chr11:69208340-69208470 chr11:69208550-69208630 chr11:69209470-69209670 chr11:69209860-69210010 chr11:69211380-69211510 chr11:69214350-69214490 chr11:69215160-69215260 chr11:69215330-69215410 chr11:69215480-69215570 chr11:69215780-69217070 chr11:69221660-69221750 chr11:69221900-69222160 chr11:69222280-69227030 chr11:69255770-69257750 chr11:69331960-69334210 chr11:69394010-69400020 chr11:69496840-69497350 chr11:69497490-69497710 chr11:69497830-69497980 chr11:69498030-69498160 chr11:69660020-69660110 chr11:69661070-69661150 chr11:69690700-69690800 chr11:69734440-69734520 chr11:69734580-69734660 chr11:69484470-69485780 chr11:69223300-69223820 chr11:69223880-69224120 chr11:69224180-69224890 chr11:69475740-69475970 chr11:69222580-69223250 chr11:69484690-69485740 chr11:68886790-68887380 chr11:69145320-69145560 chr11:69154560-69154660 chr11:69213350-69213440 chr11:69213610-69213690 chr11:69213820-69214200 chr11:69217180-69217290 chr11:69217410-69217500 chr11:69221140-69221240 chr11:69221340-69221520 chr11:69209860-69210000 chr11:69222280-69225850 chr11:69394010-69395520 chr11:69399360-69399560 chr11:69475500-69475970 chr11:69048800-69049010 chr11:69079860-69080380 chr11:69223020-69225880 chr11:69339870-69341780 chr11:69357040-69357790 chr11:69371140-69371410 chr11:69475730-69475970 chr11:69394620-69395160 chr11:69484690-69485190 chr11:69222490-69225720 chr11:69484650-69485780 chr11:69222890-69225660 chr11:69222280-69222630 chr11:69207640-69208120 chr11:69394010-69396200 chr11:69472920-69475970 chr11:68886790-68887690 chr11:69215780-69216170 chr11:69394010-69396040 chr11:69474880-69475970 chr11:69220830-69220920 chr11:69394010-69396090 chr11:69474700-69475970 chr11:69222280-69226520 chr11:69009560-69010520 chr11:69010600-69010850 chr11:69011070-69011160 chr11:69047920-69049010 chr11:69049320-69049410 chr11:69134920-69135350 chr11:69143980-69144240 chr11:69144320-69144550 chr11:69144670-69144760 chr11:69144850-69144960 chr11:69194620-69196730 chr11:69207620-69208120 chr11:69234640-69234770 chr11:69246480-69247840 chr11:69394010-69397830 chr11:69415980-69416200 chr11:69416400-69416500 chr11:69416610-69416920 chr11:69417050-69418760 chr11:69469400-69469950 chr11:69471340-69471430 chr11:69471550-69472060 chr11:69474430-69475970 chr11:69478000-69478250 chr11:69483770-69484110 chr11:69484240-69484420 chr11:69023680-69026060 chr11:69436650-69436990 chr11:68947860-68947950 chr11:69048240-69049010 chr11:69177240-69177470 chr11:69193880-69197410 chr11:69207500-69208120 chr11:69220400-69220480 chr11:69220640-69220730 chr11:69234920-69235060 chr11:69235130-69235230 chr11:69235400-69235700 chr11:69339810-69342200 chr11:69355750-69357870 chr11:69370990-69373190 chr11:69412190-69413250 chr11:69494350-69495160 chr11:69519600-69524470 chr11:69207960-69208120 chr11:68859510-68859820 chr11:68886790-68887310 chr11:69222280-69225720 chr11:69394010-69395210 chr11:69399120-69399700 chr11:69475540-69475970 chr11:69145390-69145560 chr11:69222390-69225830 chr11:69372970-69373190 chr11:68859510-68861280 chr11:69241010-69242800 chr11:69242990-69243970 chr11:69394010-69400390 chr11:69474420-69475970 chr11:69240680-69242800 chr11:69377440-69378480 chr11:69394010-69396930 chr11:69397000-69400060 chr11:69474820-69475970 chr11:69519600-69525880 chr11:69394010-69395560 chr11:68948040-68948500 chr11:69048700-69049010 chr11:69219670-69219760 chr11:69264900-69265900 chr11:69266040-69266310 chr11:69266480-69266660 chr11:69266830-69267270 chr11:69377440-69382330 chr11:69405370-69407000 chr11:69474160-69475970 chr11:69478610-69478740 chr11:69478860-69479000 chr11:69479430-69479520 chr11:69481610-69481690 chr11:69482050-69482140 chr11:69501420-69507000 chr11:69508320-69508890 chr11:69508940-69509090 chr11:69519600-69526300 chr11:69207820-69208120 chr11:69216800-69217070 chr11:69220110-69220190 chr11:69222280-69225890 chr11:69235400-69235740 chr11:69372330-69373190 chr11:69375520-69375620 chr11:69375760-69375890 chr11:69375990-69376150 chr11:69376930-69377040 chr11:69377130-69377360 chr11:69377440-69378510 chr11:69394010-69400370 chr11:69474970-69475970 chr11:69482250-69482570 chr11:69493440-69493640 chr11:69519830-69525760 chr11:69340240-69341590 chr11:69207780-69208120 chr11:69339680-69341950 chr11:69394010-69396140 chr11:69474870-69475970 chr11:69048580-69049010 chr11:69177760-69178190 chr11:69235400-69235490 chr11:69339540-69341940 chr11:69474830-69475970 chr11:68859510-68860210 chr11:68884970-68885050 chr11:69208040-69208120 chr11:69222530-69227030 chr11:69372880-69373190 chr11:69392040-69392170 chr11:69394010-69395760 chr11:69446900-69447260 chr11:69469400-69469530 chr11:69475320-69475970 chr11:69494570-69495160 chr11:69496840-69496900 chr11:69652770-69652860 chr11:69660570-69660830 chr11:69695220-69695310 chr11:69734130-69734300 chr11:69760810-69761450 chr11:69793150-69793330 chr11:69436290-69436360 chr11:69484670-69485780 chr11:69795080-69795500 chr11:69222360-69225220 chr11:69222280-69225660 chr11:69475420-69475970 chr11:68646940-68647850 chr11:68848570-68849000 chr11:68849170-68849260 chr11:68886790-68888950 chr11:69135180-69135350 chr11:69141660-69141750 chr11:69141790-69142010 chr11:69207720-69208120 chr11:69235400-69236020 chr11:69236130-69236250 chr11:69236400-69236480 chr11:69236710-69237000 chr11:69237190-69237360 chr11:69237550-69240590 chr11:69274360-69275890 chr11:69333340-69334210 chr11:69334450-69334590 chr11:69334700-69336420 chr11:69400470-69400750 chr11:69400780-69400870 chr11:69401130-69401860 chr11:69402040-69402120 chr11:69402750-69403070 chr11:69404260-69404750 chr11:69405370-69408700 chr11:69414910-69415020 chr11:69415120-69415920 chr11:69428610-69428810 chr11:69446900-69448900 chr11:69478420-69478530 chr11:69488100-69490340 chr11:69493480-69493640 chr11:69661520-69661710 chr11:69665780-69666310 chr11:69666390-69666610 chr11:69666780-69667080 chr11:69667170-69668450 chr11:69669560-69669710 chr11:69699100-69699190 chr11:69699310-69700460 chr11:69716950-69717150 chr11:69717220-69717360 chr11:69811340-69811800 chr11:69402240-69402640 chr11:68884970-68885920 chr11:68886790-68888850 chr11:68914600-68914690 chr11:69135140-69135350 chr11:69207800-69208120 chr11:69238300-69240680 chr11:69323230-69326130 chr11:69333460-69334210 chr11:69334700-69336400 chr11:69391230-69391940 chr11:69403210-69403290 chr11:69412590-69413250 chr11:69449020-69449790 chr11:69474300-69475970 chr11:69491780-69492120 chr11:69492560-69493640 chr11:69652450-69652680 chr11:69661200-69661300 chr11:69663670-69663840 chr11:69669560-69669870 chr11:69690880-69691040 chr11:69695220-69695480 chr11:69700050-69700460 chr11:69700570-69700650 chr11:69734880-69735320 chr11:69759450-69759570 chr11:69759690-69759780 chr11:69760180-69761450 chr11:69792390-69793330 chr11:69793410-69793500 chr11:69812630-69812730 chr11:69819290-69819430 chr11:69819530-69819630 chr11:69828040-69828130 chr11:69828200-69828290 chr11:69795080-69797660 chr11:69209860-69209940 chr11:69222280-69226300 chr11:69475390-69475970 chr11:69484610-69485780 chr11:69135270-69135350 chr11:69177790-69178190 chr11:69207840-69208120 chr11:69265170-69265900 chr11:69324070-69325640 chr11:69394010-69396900 chr11:69177720-69178190 chr11:69215160-69215230 chr11:69377440-69377590 chr11:69394010-69395610 chr11:69474710-69475970 chr11:69079380-69080540 chr11:69221410-69221520 chr11:69371630-69373190 chr11:69177700-69178190 chr11:69222280-69226370 chr11:69255700-69257520 chr11:69263940-69264500 chr11:69264640-69264720 chr11:69264850-69265900 chr11:69315310-69319230 chr11:69323240-69325390 chr11:69372210-69373190 chr11:69394010-69396590 chr11:69446900-69447590 chr11:69475060-69475970 chr11:69519620-69521170 chr11:69436040-69436200 chr11:69222830-69225660 chr11:69222330-69225710 chr11:69475520-69475970 chr11:69177840-69178190 chr11:69222280-69226780 chr11:69270560-69270840 chr11:69270940-69271130 chr11:69340010-69341880 chr11:69372150-69373190 chr11:69394010-69395670 chr11:69475030-69475970 chr11:69484570-69485780 chr11:69222300-69225270 chr11:69475650-69475970 chr11:68914410-68914500 chr11:68923450-68923950 chr11:69403360-69404150 chr11:69405370-69409560 chr11:69410560-69413250 chr11:69472370-69475970 chr11:69481110-69481190 chr11:69481270-69481520 chr11:69481830-69481900 chr11:69482740-69483630 chr11:69488100-69490590 chr11:69500870-69507000 chr11:69646570-69647480 chr11:69691090-69691340 chr11:69713420-69713800 chr11:69715680-69716500 chr11:69725590-69726620 chr11:69727930-69728250 chr11:69728360-69728430 chr11:69728540-69728640 chr11:69728720-69728800 chr11:69729790-69729920 chr11:69730090-69730210 chr11:69730840-69730920 chr11:69731000-69731090 chr11:69731230-69731410 chr11:69732830-69732950 chr11:69732980-69733840 chr11:69778420-69778920 chr11:69779650-69780440 chr11:69780600-69780720 chr11:69792610-69793330 chr11:69793560-69793710 chr11:69794060-69794660 chr11:69805940-69806080 chr11:69806200-69807030 chr11:69809550-69810440 chr11:69810560-69810960 chr11:69811130-69811240 chr11:69795080-69797650 chr11:69197360-69199290 chr11:69222280-69225920 chr11:69242190-69242800 chr11:69242990-69243190 chr11:69270040-69270840 chr11:69270940-69271100 chr11:69394010-69396560 chr11:69255860-69258000 chr11:69317170-69318600 chr11:69350200-69352890 chr11:69473800-69475970 chr11:69519800-69521400 chr11:69353060-69355300 chr11:69209470-69209620 chr11:69223110-69227030 chr11:69339600-69341800 chr11:69449020-69450000 chr11:69483000-69483630 chr11:69484810-69485780 chr11:68725160-68726190 chr11:68787350-68787890 chr11:68886980-68887470 chr11:69048630-69049010 chr11:69324280-69325540 chr11:69340560-69341150 chr11:69350350-69351970 chr11:69377440-69378870 chr11:69394010-69395570 chr11:69412810-69413250 chr11:69417730-69418760 chr11:69446900-69447250 chr11:69475020-69475970 chr11:69496840-69497140 chr11:69508540-69508890 chr11:69652150-69652420 chr11:69689490-69690180 chr11:69695590-69695690 chr11:69734880-69734990 chr11:69836950-69837510 chr11:69838980-69840420 chr11:69840490-69841470 chr11:69841680-69843900 chr11:69882760-69883810 chr11:69484710-69485780 chr11:69222370-69227030 chr11:69265530-69265900 chr11:69270520-69270840 chr11:69270940-69271090 chr11:69324290-69325540 chr11:69330180-69331360 chr11:69340380-69341660 chr11:69474900-69475970 chr11:69484500-69485780 chr11:69207770-69208120 chr11:69235400-69235460 chr11:69400680-69400750 chr11:69405370-69407100 chr11:69449020-69450630 chr11:69473360-69475970 chr11:69048460-69049010 chr11:69256930-69257770 chr11:69265660-69265900 chr11:69266830-69266940 chr11:69394010-69396870 chr11:69469400-69469510 chr11:69474460-69475970 chr11:69214870-69215010 chr11:69222280-69225800 chr11:69256800-69257810 chr11:69265630-69265900 chr11:69048760-69049010 chr11:69222280-69227020 chr11:69317220-69317970 chr11:69359340-69360150 chr11:69394010-69395850 chr11:69474930-69475970 chr11:69194690-69198030 chr11:69255650-69257940 chr11:69394010-69399620 chr11:69473520-69475970 chr11:69224710-69226300 chr11:69108090-69108710 chr11:69119570-69120130 chr11:69239460-69240360 chr11:69317300-69317670 chr11:69323410-69325620 chr11:69330340-69330610 chr11:69449020-69449680 chr11:69474730-69475970 chr11:69287820-69288590 chr11:69222280-69225910 chr11:69399170-69400240 chr11:69340420-69341820 chr11:69394010-69396260 chr11:68886790-68887410 chr11:68890920-68892020 chr11:68934010-68935010 chr11:68935100-68935640 chr11:68935730-68936040 chr11:69207530-69208120 chr11:69221690-69221750 chr11:69222280-69226170 chr11:68532240-68533170 chr11:68724640-68726000 chr11:68786770-68786940 chr11:68787050-68787140 chr11:68787350-68787510 chr11:68848660-68849000 chr11:68859510-68860690 chr11:68884530-68884720 chr11:68886790-68887700 chr11:68889620-68891260 chr11:68912510-68913650 chr11:69048310-69049010 chr11:69269840-69270840 chr11:69270940-69271420 chr11:69338570-69342200 chr11:69394010-69396970 chr11:69405370-69406750 chr11:69704480-69705630 chr11:69749750-69750390 chr11:69750460-69750750 chr11:69814520-69815150 chr11:69827400-69827740 chr11:69828690-69828760 chr11:69839310-69840420 chr11:69840490-69843900 chr11:69844150-69844360 chr11:68665420-68666440 chr11:69177880-69178190 chr11:69222300-69225840 chr11:69340520-69341850 chr11:69394220-69394990 chr11:69222720-69224480 chr11:69356230-69357430 chr11:68890810-68892020 chr11:69330180-69330990 chr11:69222280-69226130 chr11:69237230-69237360 chr11:69242400-69242800 chr11:69242990-69243490 chr11:69394010-69395860 chr11:69399340-69399750 chr11:69501680-69507000 chr11:69208060-69208120 chr11:69209470-69209580 chr11:69222350-69225890 chr11:69222280-69225220 chr11:68886790-68888770 chr11:68940050-68940820 chr11:69144400-69144550 chr11:69207370-69208120 chr11:69214140-69214200 chr11:69215780-69215990 chr11:69234920-69235020 chr11:69255780-69257820 chr11:69394010-69397380 chr11:69449020-69451220 chr11:69474410-69475970 chr11:69493550-69493640 chr11:69519600-69523720 chr11:69222280-69225820 chr11:69394010-69395510 chr11:69475430-69475970 chr11:69215780-69216030 chr11:69222280-69225830 chr11:69449020-69449560 chr11:69474990-69475970 chr11:69488100-69490400 chr11:69145410-69145560 chr11:69222280-69225840 chr11:69222280-69226970 chr11:69256940-69257480 chr11:69317220-69318140 chr11:69340490-69341050 chr11:69394010-69395550 chr11:69394340-69395310 chr11:69475680-69475970 chr11:69484520-69485780 chr11:69145440-69145560 chr11:69207370-69207530 chr11:69207790-69208120 chr11:69359340-69360430 chr11:69446900-69447450 chr11:69469400-69469520 chr11:69475490-69475970 chr11:69496840-69497050 chr11:69435830-69435920 chr11:69135150-69135350 chr11:69215780-69216080 chr11:69449020-69450310 chr11:69046530-69047370 chr11:69047790-69049010 chr11:69222280-69226280 chr11:69239620-69240540 chr11:69394010-69395310 chr11:68886790-68887330 chr11:69046530-69047160 chr11:69079740-69080240 chr11:69245680-69246070 chr11:69340480-69341260 chr11:69474770-69475970 chr11:69222280-69225650 chr11:69475190-69475970 chr11:69222280-69225990 chr11:69265570-69265900 chr11:69266830-69266890 chr11:69274830-69275680 chr11:69469400-69469840 chr11:69474800-69475970 chr11:69497520-69497710 chr11:69508400-69508890 chr11:69520180-69521010 chr11:69435830-69435990 chr11:69224080-69227030 chr11:69264860-69265900 chr11:69377440-69378560 chr11:69471550-69471770 chr11:69474840-69475970 chr11:69500870-69505630 chr11:69519600-69525650 chr11:69531520-69532740 chr11:69214060-69214200 chr11:69215780-69216020 chr11:69474500-69475970 chr11:69145400-69145560 chr11:69221930-69222160 chr11:69222820-69223750 chr11:69224100-69225720 chr11:69242220-69242640 chr11:69256900-69257230 chr11:69265650-69265900 chr11:69266040-69266210 chr11:69317340-69317670 chr11:69503240-69503890 chr11:69521250-69522090 chr11:69222280-69222810

Promoter:

chr11:69411675-69415675

 ChIP-seq based regulatory details of Kdm6b
Sample ID Experiment target Biosample term name Cell type Tissue type Source
TcoF_01_30136 Kdm6b LF2 Embryonic Stem Cell Embryo ChIP_Atlas
TcoF_01_20426 Kdm6b E14 Embryonic Stem Cell Embryo Cistrome
TcoF_01_20195 Kdm6b None Embryonic Stem Cell Embryo Cistrome
TcoF_01_20194 Kdm6b None Embryonic Stem Cell Embryo Cistrome
TcoF_01_20168 Kdm6b None Th17 None Cistrome
TcoF_01_20092 Kdm6b None Cortex None Cistrome
TcoF_01_20077 Kdm6b None Cortex None Cistrome
TcoF_01_20025 Kdm6b None Macrophage Bone Marrow Cistrome
 Downstream target genes of Kdm6b
 Upstream regulatory details of Kdm6b
 Protein-protein interaction of Kdm6b
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
Kdm6b Smarca4 Affinity Capture-Western 21095589 10090 10090 BIOGRID
Kdm6b Smarcc1 Affinity Capture-Western 21095589 10090 10090 BIOGRID
Kdm6b H3f3a Biochemical Activity 17825402 10090 10090 BIOGRID
Kdm6b Phf20 Affinity Capture-Western 23452852 10090 10090 BIOGRID
Kdm6b Trim26 Affinity Capture-Western 23452852 10090 10090 BIOGRID
Kdm6b Ascl1 Co-localization 20506217 10090 10090 BIOGRID
Kdm6b Ash2l Co-fractionation 32325033 10090 10090 BIOGRID
Kdm6b Phf20 Co-fractionation 32325033 10090 10090 BIOGRID
Kdm6b Rbbp5 Co-fractionation 32325033 10090 10090 BIOGRID
 Annotation of Kdm6b
 Disease information of Kdm6b