TcoF overview
| TcoF: | Rnf20 | |
| GeneID: | 109331 | |
| Name: | E3 ubiquitin protein ligase | |
| Ensembl: | ENSMUSG00000028309 | |
| Species: | Mouse | |
| Class: | class 3 | |
| Family: | Ring finger protein | |
| Disease: | -- | |
| Go-trem: | 24 | |
| Pathway: | 2 | |
| Super Enhancer: | chr4:49643654-49645185 chr4:49661743-49663024 chr4:49622567-49623553 chr4:49628569-49629725 chr4:49625363-49625620 chr4:49622128-49622914 chr4:49661436-49662772 |
|
| Enhancer: |
chr4:49531980-49533830 chr4:49534460-49535260 chr4:49646280-49647780 chr4:49534460-49534610 chr4:49609910-49610490 chr4:49572410-49573700 chr4:49533250-49533830 chr4:49534460-49535190 chr4:49533660-49533830 chr4:49572740-49573090 chr4:49610040-49610490 chr4:49533390-49533830 chr4:49532110-49533830 chr4:49534460-49535180 chr4:49533460-49533830 chr4:49646280-49646360 chr4:49533360-49533830 chr4:49532900-49533830 chr4:49535350-49536110 chr4:49572410-49574480 chr4:49609060-49610490 chr4:49532950-49533830 chr4:49534460-49535220 chr4:49572410-49574520 chr4:49608900-49610490 chr4:49856540-49857250 chr4:49534460-49535200 chr4:49533380-49533830 chr4:49609710-49610490 chr4:49531040-49533830 chr4:49533120-49533830 chr4:49533470-49533830 chr4:49534460-49534880 chr4:49534460-49534630 chr4:49609990-49610490 chr4:49646280-49648180 chr4:49532280-49533830 chr4:49592130-49597370 chr4:49608390-49610490 chr4:49646280-49648350 chr4:49689660-49690080 chr4:49533320-49533830 chr4:49609680-49610490 chr4:49533170-49533830 chr4:49572410-49574180 chr4:49596670-49597370 chr4:49608270-49610490 chr4:49609690-49610490 chr4:49560450-49562300 chr4:49420750-49420980 chr4:49486290-49487070 chr4:49533350-49533830 chr4:49556740-49557660 chr4:49572410-49573800 chr4:49609650-49610490 chr4:49491000-49501200 chr4:49532600-49533830 chr4:49534460-49534750 chr4:49572410-49574000 chr4:49600200-49610490 chr4:49703380-49705420 chr4:49557790-49562300 chr4:49533540-49533830 chr4:49610250-49610490 chr4:49533400-49533830 chr4:49534460-49534620 chr4:49596780-49597370 chr4:49610090-49610490 chr4:49486340-49491800 chr4:49533420-49533830 chr4:49596800-49597370 chr4:49609970-49610490 chr4:49609580-49610490 chr4:49688190-49689230 chr4:49596220-49597370 chr4:49609720-49610490 chr4:49531190-49533830 chr4:49646280-49647300 chr4:49488700-49489270 chr4:49491170-49492220 chr4:49609530-49610490 chr4:49532640-49533830 chr4:49609420-49610490 chr4:49533330-49533830 chr4:49609730-49610490 chr4:49856560-49857250 chr4:49904410-49905330 chr4:49298400-49299630 chr4:49532930-49533830 chr4:49491220-49494480 chr4:49533490-49533830 chr4:49535350-49535920 chr4:49572510-49573620 chr4:49595260-49597370 chr4:49609460-49610490 chr4:49646280-49648370 chr4:49534460-49534590 chr4:49609810-49610490 chr4:49532920-49533830 chr4:49534460-49534690 chr4:49491000-49491680 chr4:49596290-49597370 chr4:49609640-49610490 chr4:49533510-49533830 chr4:49534460-49534650 chr4:49609700-49610490 chr4:49534460-49534890 chr4:49690310-49691610 chr4:49694050-49694310 chr4:49694850-49695710 chr4:49534460-49534540 chr4:49596930-49597370 chr4:49533640-49533830 chr4:49533600-49533830 |
|
| Promoter: |
chr4:49630059-49634059 |
ChIP-seq based regulatory details of Rnf20
| Sample ID | Experiment target | Biosample term name | Cell type | Tissue type | Source |
|---|
Downstream target genes of Rnf20
Protein-protein interaction of Rnf20
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| Rnf20 | Tfap2a | Affinity Capture-Western | 24374663 | 10090 | 10090 | BIOGRID |
| Rnf20 | Tfap2a | Co-localization | 24374663 | 10090 | 10090 | BIOGRID |
| Rnf20 | Srebf1 | Affinity Capture-Western | 24425205 | 10090 | 10090 | BIOGRID |
| Rnf20 | Ctr9 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Rnf20 | Fbxw4 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Rnf20 | Leo1 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Rnf20 | Paf1 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Rnf20 | Supt16 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
Annotation of Rnf20
Expression of Rnf20
Disease information of Rnf20