TcoF overview
| TcoF: | Sin3b | |
| GeneID: | 20467 | |
| Name: | Paired amphipathic helix protein Sin3b | |
| Ensembl: | ENSMUSG00000031622 | |
| Species: | Mouse | |
| Class: | class HC | |
| Family: | Others | |
| Disease: | -- | |
| Go-trem: | 17 | |
| Pathway: | 7 | |
| Super Enhancer: | chr8:72746886-72749290 chr8:72733999-72736502 chr8:72737790-72753053 chr8:72733094-72743133 chr8:72730170-72730630 chr8:72735003-72735512 |
|
| Enhancer: |
chr8:74671160-74675640 chr8:74685380-74688780 chr8:74743980-74745800 chr8:74817820-74821500 chr8:74824950-74830820 chr8:74843040-74843320 chr8:74844140-74844640 chr8:74845550-74847650 chr8:74931080-74945300 chr8:74969360-74971580 chr8:74996280-74998510 chr8:74998680-74998950 chr8:75013720-75015740 chr8:75015810-75016060 chr8:75021490-75039120 chr8:75064900-75071790 chr8:75248040-75249220 chr8:75339920-75341400 chr8:75009820-75010100 chr8:75107020-75107330 chr8:75206780-75207430 chr8:74876530-74880370 chr8:75015160-75015740 chr8:75071000-75071790 chr8:74870070-74882210 chr8:74997880-74998510 chr8:75285910-75286150 chr8:74870960-74879560 chr8:74845550-74847950 chr8:74870070-74880880 chr8:75015040-75015740 chr8:75206020-75207860 chr8:75070460-75071790 chr8:75248040-75249000 chr8:75248040-75248980 chr8:75070640-75071790 chr8:74933070-74933820 chr8:75206800-75207940 chr8:74878040-74878860 chr8:75009400-75012010 chr8:75106550-75107870 chr8:74808640-74810230 chr8:75071450-75071790 chr8:75008800-75012010 chr8:75013480-75015740 chr8:75105490-75108590 chr8:75248040-75249430 chr8:75068740-75071790 chr8:75178130-75180860 chr8:75178770-75180190 chr8:75082200-75086000 chr8:75178240-75180360 chr8:75248040-75248820 chr8:74998140-74998510 chr8:75015270-75015740 chr8:75093170-75093860 chr8:75178380-75180020 chr8:75248040-75248370 chr8:75071200-75071790 chr8:75178430-75180270 chr8:75178120-75180340 chr8:74745880-74746080 chr8:74764140-74766630 chr8:74799880-74802000 chr8:74874600-74880760 chr8:74969360-74970060 chr8:74997020-74998510 chr8:75012440-75013350 chr8:75186900-75190500 chr8:75191770-75192310 chr8:74791540-74793490 chr8:75068680-75071790 chr8:74997000-74998510 chr8:75014950-75015740 chr8:75187000-75190500 chr8:75191770-75192420 chr8:75206020-75208130 chr8:75248040-75249280 chr8:75069370-75071790 chr8:75339920-75340080 chr8:74886030-74890170 chr8:74959050-74959950 chr8:74987210-74987980 chr8:74998200-74998510 chr8:75035410-75037740 chr8:75040710-75042900 chr8:75084840-75085620 chr8:75101570-75103140 chr8:75106750-75107840 chr8:75015600-75015740 chr8:75015810-75015910 chr8:75178620-75179390 chr8:75070830-75071790 chr8:74845550-74864890 chr8:74933620-74945300 chr8:74996350-74998510 chr8:75014030-75015740 chr8:75092840-75093860 chr8:75069210-75071790 chr8:75248040-75248860 chr8:75071210-75071790 chr8:74997800-74998510 chr8:75012200-75013350 chr8:75248040-75248830 chr8:75070400-75071790 chr8:75170900-75172400 chr8:75178600-75180200 chr8:75070810-75071790 chr8:74743980-74744150 chr8:75178600-75179980 chr8:75070600-75071790 chr8:74998170-74998510 chr8:75178880-75179340 chr8:74933070-74944950 chr8:74877430-74879350 chr8:74998160-74998510 chr8:75009670-75010420 chr8:74931280-74936680 chr8:74997070-74998510 chr8:75014020-75015740 chr8:75093080-75093860 chr8:75248040-75249130 chr8:75071410-75071790 chr8:75045760-75046660 chr8:75174380-75175230 chr8:75188480-75189930 chr8:75206880-75208020 chr8:75070540-75071790 chr8:74685380-74686710 chr8:74933090-74933880 chr8:75015110-75015740 chr8:75093240-75093860 chr8:75106890-75107810 chr8:75170900-75171900 chr8:75177950-75180950 chr8:75248040-75248320 chr8:75442440-75444500 chr8:75070470-75071790 chr8:75478760-75481100 chr8:75105170-75108590 chr8:74872920-74879590 chr8:75106780-75107790 chr8:75339920-75340500 chr8:75248040-75248900 chr8:75009520-75011400 chr8:75105420-75108590 chr8:75108710-75109170 chr8:75170900-75171240 chr8:75206610-75207410 chr8:75013140-75013350 chr8:75039650-75042360 chr8:75066450-75071790 chr8:74998430-74998510 chr8:75015480-75015740 chr8:75071120-75071790 chr8:74998030-74998510 chr8:75014930-75015740 chr8:75065670-75070330 chr8:75093410-75093860 chr8:75248040-75248890 chr8:75489800-75491310 chr8:75070570-75071790 chr8:74874930-74882210 chr8:74883050-74885420 chr8:75015540-75015740 chr8:75070700-75071790 chr8:75067180-75068150 chr8:75490230-75491200 chr8:75012140-75013350 chr8:75039520-75045130 chr8:75206020-75207880 chr8:74873450-74882210 chr8:75014920-75015740 chr8:75042020-75043530 chr8:75189070-75189920 chr8:75206830-75207840 chr8:75071400-75071790 chr8:74874970-74879620 chr8:75106870-75107770 chr8:75178540-75180300 chr8:75187800-75190420 chr8:75206740-75207720 chr8:75248040-75248260 chr8:75071720-75071790 chr8:74876590-74879590 chr8:75085000-75086000 chr8:75178630-75180460 chr8:74743980-74744100 chr8:75071700-75071790 chr8:75178830-75179410 chr8:75206780-75207480 |
|
| Promoter: |
chr8:72721287-72725287 |
ChIP-seq based regulatory details of Sin3b
| Sample ID | Experiment target | Biosample term name | Cell type | Tissue type | Source |
|---|---|---|---|---|---|
| TcoF_01_20615 | Sin3b | MEFs | Embryonic Fibroblast | None | Cistrome |
| TcoF_01_20614 | Sin3b | MEFs | Embryonic Fibroblast | None | Cistrome |
| TcoF_01_20007 | Sin3b | C2C12 | Myoblast | Muscle | Cistrome |
| TcoF_01_20006 | Sin3b | C2C12 | Myoblast | Muscle | Cistrome |
| TcoF_01_20005 | Sin3b | C2C12 | Myoblast | Muscle | Cistrome |
| TcoF_01_20004 | Sin3b | C2C12 | Myoblast | Muscle | Cistrome |
| TcoF_01_20003 | Sin3b | C2C12 | Myoblast | Muscle | Cistrome |
| TcoF_01_20002 | Sin3b | C2C12 | Myoblast | Muscle | Cistrome |
| TcoF_01_20001 | Sin3b | C2C12 | Myoblast | Muscle | Cistrome |
Downstream target genes of Sin3b
Protein-protein interaction of Sin3b
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| Sin3b | IFRD1 | Affinity Capture-Western | 12198164 | 10090 | 9606 | BIOGRID |
| Sin3b | REST | Affinity Capture-Western | 10570134 | 10090 | 9606 | BIOGRID |
| Sin3b | Sin3a | Affinity Capture-Western | 16103876 | 10090 | 10090 | BIOGRID |
| Sin3b | Hdac1 | Affinity Capture-Western | 16103876 | 10090 | 10090 | BIOGRID |
| Sin3b | Myt1 | Affinity Capture-Western | 15935060 | 10090 | 10090 | BIOGRID |
| Sin3b | Hdac1 | Affinity Capture-Western | 10409740 | 10090 | 10090 | BIOGRID |
| Sin3b | Phf12 | Affinity Capture-Western | 21041482 | 10090 | 10090 | BIOGRID |
| Sin3b | Morf4l1 | Affinity Capture-Western | 21041482 | 10090 | 10090 | BIOGRID |
| Sin3b | Hdac1 | Affinity Capture-Western | 21041482 | 10090 | 10090 | BIOGRID |
| Sin3b | Mecp2 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Sin3b | Myt1 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Sin3b | Rnf220 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
Annotation of Sin3b
Expression of Sin3b
Disease information of Sin3b