TcoF overview
| TcoF: | Sin3a | |
| GeneID: | 20466 | |
| Name: | Paired amphipathic helix protein Sin3a | |
| Ensembl: | ENSMUSG00000042557 | |
| Species: | Mouse | |
| Class: | NA | |
| Family: | Other_CRF | |
| Disease: | -- | |
| Go-trem: | 49 | |
| Pathway: | 18 | |
| Super Enhancer: |
|
|
| Enhancer: |
chr9:56697090-56697760 chr9:56697870-56698540 chr9:56713080-56721980 chr9:56754500-56756400 chr9:56757940-56765000 chr9:56766510-56773110 chr9:56843460-56849480 chr9:56859580-56863950 chr9:56864580-56866800 chr9:56919870-56924180 chr9:56924430-56928900 chr9:56973180-56974950 chr9:56977930-56978350 chr9:56979460-56980380 chr9:56984870-56985080 chr9:56985180-56985270 chr9:56985390-56985550 chr9:57004940-57006070 chr9:57093680-57094040 chr9:57094560-57095690 chr9:57095810-57095910 chr9:57095960-57096060 chr9:57102130-57104190 chr9:57120400-57128480 chr9:57128950-57136520 chr9:57142120-57145780 chr9:57159020-57163620 chr9:57163720-57167680 chr9:56786200-56788730 chr9:56917450-56919410 chr9:57145790-57151350 chr9:56843460-56843730 chr9:56924430-56925010 chr9:57005790-57006070 chr9:57166920-57167160 chr9:57187640-57188090 chr9:57265180-57265410 chr9:57272720-57273280 chr9:57280540-57281090 chr9:57369220-57369670 chr9:56978060-56978350 chr9:56713080-56714370 chr9:56770800-56773110 chr9:56843460-56844820 chr9:57120400-57122200 chr9:57143230-57144860 chr9:56786200-56787590 chr9:56843460-56843870 chr9:56923180-56924000 chr9:56924430-56924900 chr9:56978160-56978350 chr9:57073810-57074160 chr9:57147070-57147820 chr9:56924430-56924670 chr9:57005710-57006070 chr9:56977980-56978350 chr9:57005160-57006070 chr9:56843460-56843630 chr9:56924000-56924180 chr9:57005850-57006070 chr9:57109420-57109680 chr9:56924430-56925900 chr9:57005010-57006070 chr9:57120400-57122730 chr9:57186600-57188790 chr9:56786200-56787800 chr9:56918900-56919410 chr9:56920430-56923810 chr9:57120400-57123300 chr9:57125170-57127710 chr9:57186500-57188520 chr9:57499790-57501080 chr9:57484780-57492060 chr9:57005510-57006070 chr9:57187140-57188290 chr9:56786200-56786580 chr9:56843460-56844160 chr9:56924430-56925560 chr9:57005040-57006070 chr9:57120400-57123610 chr9:57186540-57188590 chr9:57250440-57252490 chr9:57275160-57277730 chr9:56786200-56786850 chr9:56740320-56740420 chr9:56740550-56740660 chr9:56740820-56741620 chr9:56843460-56845150 chr9:56924430-56926230 chr9:56979460-56980060 chr9:56993610-56994400 chr9:56786200-56786980 chr9:56918150-56919410 chr9:56584420-56589010 chr9:56593260-56597640 chr9:56599890-56603820 chr9:56613930-56616520 chr9:56726630-56731360 chr9:56738340-56738790 chr9:56843460-56844980 chr9:56924430-56925870 chr9:56979460-56979910 chr9:56993020-56994400 chr9:57120400-57121890 chr9:57264230-57267960 chr9:56786200-56787230 chr9:56918730-56919410 chr9:56755210-56755850 chr9:56772320-56772940 chr9:56924430-56925940 chr9:57005690-57006070 chr9:57120400-57123600 chr9:57187510-57188100 chr9:57274860-57277560 chr9:57097670-57100120 chr9:56922940-56924180 chr9:56924430-56925300 chr9:56923170-56923880 chr9:56753850-56756080 chr9:56924430-56927380 chr9:56843460-56844770 chr9:56919870-56924170 chr9:57045430-57046650 chr9:57092000-57093240 chr9:57120400-57123680 chr9:56978040-56978350 chr9:57073120-57074360 chr9:56917750-56919410 chr9:56677560-56679050 chr9:56843460-56844850 chr9:56924430-56928710 chr9:57003780-57003970 chr9:56843460-56844340 chr9:56922820-56924180 chr9:56924430-56925790 chr9:56977970-56978350 chr9:56979460-56979590 chr9:56993840-56994400 chr9:56843460-56844460 chr9:56919870-56923940 chr9:56919280-56919410 chr9:56594090-56595440 chr9:56843460-56844380 chr9:56924430-56925460 chr9:57005570-57006070 chr9:56786200-56786590 chr9:56919120-56919410 chr9:56843460-56844100 chr9:56924430-56925540 chr9:57004090-57004320 chr9:57004360-57004580 chr9:56917280-56919410 chr9:56771010-56773110 chr9:56843460-56844680 chr9:56924430-56925440 chr9:56979460-56979760 chr9:57072600-57074360 chr9:57096210-57096420 chr9:57096510-57097530 chr9:57120400-57121550 chr9:57154970-57156060 chr9:56786200-56787550 chr9:56917660-56919410 chr9:57097670-57098630 chr9:56923480-56924180 chr9:56924430-56925200 chr9:56699040-56699460 chr9:56699590-56699670 chr9:56713080-56722280 chr9:56843460-56844810 chr9:56919870-56924020 chr9:56919220-56919410 chr9:56713080-56717280 chr9:56717360-56722560 chr9:56770520-56773110 chr9:56843460-56844520 chr9:56924010-56924180 chr9:56924430-56925430 chr9:56979460-56979680 chr9:56786200-56786860 chr9:56713080-56717930 chr9:56723690-56725690 chr9:56728760-56731120 chr9:56763780-56764360 chr9:56770680-56773110 chr9:56924430-56925370 chr9:56977940-56978350 chr9:57107050-57108060 chr9:57108630-57110230 chr9:57124080-57124590 chr9:56918890-56919410 chr9:56575560-56576600 chr9:56625010-56625460 chr9:56644610-56645050 chr9:56677760-56678910 chr9:56699600-56699670 chr9:56713080-56713140 chr9:56843460-56844330 chr9:56923990-56924180 chr9:56924430-56925400 chr9:56979460-56979580 chr9:57129130-57129700 chr9:56843460-56843660 chr9:56978020-56978350 chr9:56924430-56926530 chr9:56979460-56981320 chr9:56918810-56919410 chr9:56843460-56844540 chr9:56850820-56851270 chr9:56862500-56863010 chr9:56911900-56912430 chr9:56924430-56925420 chr9:56930030-56930570 chr9:56918910-56919410 chr9:56747670-56750400 chr9:56770000-56773110 chr9:56843460-56845000 chr9:56864200-56867710 chr9:56924430-56926800 chr9:56979460-56980000 chr9:56993900-56994400 chr9:57059200-57062400 chr9:56786200-56787200 chr9:56867850-56870000 chr9:56918000-56919410 chr9:56315250-56315850 chr9:56381740-56383760 chr9:56387310-56388060 chr9:56403850-56405530 chr9:56406910-56408360 chr9:56460080-56461510 chr9:56481620-56482880 chr9:56554100-56555250 chr9:56643250-56645190 chr9:56689790-56690900 chr9:56713080-56716780 chr9:56727530-56731360 chr9:56770990-56773110 chr9:56843460-56844350 chr9:56919870-56923950 chr9:56924430-56925480 chr9:57060790-57061230 chr9:57128940-57129910 chr9:57385910-57386610 chr9:57437490-57438130 chr9:57484890-57490030 chr9:57646260-57647400 chr9:57653440-57657970 chr9:57658280-57666830 chr9:57677720-57680540 chr9:56918650-56919410 chr9:57490620-57492800 chr9:56689630-56690830 chr9:56713080-56722150 chr9:56724410-56725150 chr9:56725930-56731280 chr9:56770460-56773110 chr9:56843460-56844800 chr9:56786200-56787240 chr9:56918800-56919410 chr9:56920320-56924130 chr9:56924430-56925500 chr9:56979460-56979690 chr9:56916390-56919410 chr9:56613830-56616450 chr9:56699160-56699460 chr9:56714830-56717210 chr9:56919870-56923970 chr9:56924430-56925660 chr9:56979460-56979640 chr9:56786200-56786460 chr9:56917820-56919410 chr9:56749020-56749380 chr9:56843460-56844550 chr9:56922720-56924180 chr9:56924430-56925030 chr9:57005550-57006070 chr9:57102890-57103240 chr9:57107470-57107950 chr9:56614220-56615740 chr9:56715540-56716930 chr9:56770910-56773110 chr9:56919870-56924040 chr9:56924430-56925510 chr9:57094960-57095690 chr9:57102130-57103190 chr9:57129270-57129770 chr9:56786200-56787380 chr9:57099060-57099950 chr9:56698650-56699460 chr9:56713080-56722260 chr9:56723040-56726470 chr9:56758210-56764790 chr9:56770050-56773110 chr9:56843460-56846620 chr9:56924430-56927050 chr9:57274960-57277940 chr9:56786200-56788180 chr9:56918370-56919410 chr9:57272750-57273320 chr9:56751060-56752290 chr9:56771720-56773110 chr9:56817300-56818060 chr9:56818160-56818390 chr9:56821320-56822480 chr9:56823110-56824520 chr9:56843460-56844950 chr9:56924430-56925760 chr9:57005180-57006070 chr9:57044200-57045650 chr9:57046710-57047560 chr9:57051360-57052110 chr9:57060420-57061340 chr9:57061390-57062720 chr9:57072300-57074360 chr9:57085480-57087380 chr9:57120400-57121680 chr9:57155060-57156400 chr9:57164900-57166200 chr9:57187390-57188120 chr9:57204190-57204580 chr9:57282890-57283250 chr9:57387100-57388460 chr9:57394370-57395900 chr9:57485420-57490360 chr9:57498030-57499450 chr9:57650700-57651730 chr9:57653460-57653990 chr9:57670500-57671140 chr9:56917760-56919410 chr9:57065190-57066490 chr9:57490540-57492800 chr9:57145630-57151000 chr9:56924430-56925350 chr9:56919320-56919410 chr9:56714860-56722480 chr9:56922670-56924180 chr9:56924430-56925360 chr9:56786200-56786350 chr9:56921600-56924180 chr9:57120400-57122710 chr9:57186270-57188530 chr9:56714440-56722370 chr9:56723580-56726220 chr9:56728290-56731270 chr9:56843460-56843710 chr9:56978140-56978350 chr9:57264830-57267960 chr9:56771660-56773110 chr9:57164810-57168220 chr9:56786200-56786500 chr9:56918970-56919410 chr9:56771060-56773110 chr9:57143990-57144660 chr9:57271840-57273620 chr9:57120400-57122590 chr9:57165270-57166140 chr9:57120400-57122080 chr9:56747670-56750430 chr9:56754440-56756310 chr9:56768960-56773110 chr9:56843460-56845760 chr9:56979460-56980020 chr9:56994330-56994400 chr9:57004510-57004580 chr9:57124740-57133060 chr9:57164280-57167090 chr9:57239000-57240230 chr9:57264840-57267960 chr9:57398580-57399950 chr9:56917720-56919410 chr9:57098020-57100120 chr9:56843460-56844440 chr9:56978260-56978350 chr9:57005700-57006070 chr9:56786200-56786530 chr9:56699250-56699460 chr9:56923130-56924180 chr9:56924430-56928140 chr9:56979460-56980410 chr9:56918140-56919410 chr9:56843460-56843830 chr9:56922640-56924180 chr9:56924430-56925390 chr9:57005440-57006070 chr9:56614260-56614720 chr9:56714800-56717220 chr9:56724210-56725490 chr9:56748000-56749850 chr9:56754710-56756360 chr9:56770200-56773110 chr9:56843460-56844480 chr9:56865180-56865720 chr9:57129320-57129720 chr9:57275770-57276840 chr9:56786200-56786830 chr9:56923000-56924180 chr9:56924430-56925260 chr9:57005650-57006070 chr9:56843460-56844320 chr9:56924430-56925570 chr9:56843460-56844600 chr9:56878730-56880170 chr9:56994310-56994400 chr9:57004640-57004870 chr9:57120400-57127820 chr9:57249640-57253350 chr9:57272770-57273510 chr9:57273690-57278760 chr9:57399150-57399950 chr9:56823110-56823830 chr9:56843460-56843770 chr9:56879420-56879940 chr9:56922740-56924180 chr9:56924430-56925450 chr9:57005840-57006070 chr9:57120400-57122240 chr9:57186200-57188570 chr9:57189790-57191920 chr9:57204080-57204720 chr9:57275060-57277650 chr9:56786200-56786690 chr9:56923980-56924180 chr9:56924430-56924990 chr9:57005360-57006070 chr9:57187640-57188150 chr9:56713080-56713160 chr9:56724540-56725260 chr9:56729900-56731360 chr9:56771690-56773110 chr9:56843460-56844070 chr9:56920370-56924180 chr9:56979460-56979650 chr9:57005730-57006070 chr9:56786200-56786920 chr9:56677860-56678370 chr9:56924430-56925310 chr9:57120400-57122490 chr9:57275130-57277580 chr9:56843460-56844290 chr9:56862520-56863130 chr9:56922880-56924180 chr9:57005330-57006070 chr9:56918930-56919410 chr9:56922840-56924180 chr9:57129450-57129800 chr9:57144050-57144630 |
|
| Promoter: |
chr9:57070039-57074039 |
ChIP-seq based regulatory details of Sin3a
| Sample ID | Experiment target | Biosample term name | Cell type | Tissue type | Source |
|---|---|---|---|---|---|
| TcoF_01_22015 | Sin3a | None | reprogramming cells | None | Cistrome |
| TcoF_01_22014 | Sin3a | None | reprogramming cells | None | Cistrome |
| TcoF_01_22013 | Sin3a | None | Embryonic Stem Cell | None | Cistrome |
| TcoF_01_22012 | Sin3a | NIH-3T3 | NIH/3T3 | None | Cistrome |
| TcoF_01_22011 | Sin3a | None | Neural Stem Cell | None | Cistrome |
| TcoF_01_22010 | Sin3a | None | Neural Stem Cell | None | Cistrome |
| TcoF_01_22009 | Sin3a | None | Neural Stem Cell | None | Cistrome |
| TcoF_01_22008 | Sin3a | None | Neural Stem Cell | None | Cistrome |
| TcoF_01_22007 | Sin3a | C2C12 | Myoblast | Muscle | Cistrome |
| TcoF_01_22006 | Sin3a | MEL | Erythroid Progenitor Cell | None | Cistrome |
| TcoF_01_22005 | Sin3a | CH12 | Lymphoblastoid | Blood | Cistrome |
| TcoF_01_22004 | Sin3a | C2C12 | Myoblast | Muscle | Cistrome |
| TcoF_01_22003 | Sin3a | C2C12 | Myoblast | Muscle | Cistrome |
| TcoF_01_22002 | Sin3a | C2C12 | Myoblast | Muscle | Cistrome |
| TcoF_01_22001 | Sin3a | C2C12 | Myoblast | Muscle | Cistrome |
| TcoF_01_22000 | Sin3a | C2C12 | Myoblast | Muscle | Cistrome |
| TcoF_01_21999 | Sin3a | C2C12 | Myoblast | Muscle | Cistrome |
| TcoF_01_21998 | Sin3a | None | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_21997 | Sin3a | None | Embryonic Stem Cell | Embryo | Cistrome |
Downstream target genes of Sin3a
Protein-protein interaction of Sin3a
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| Sin3a | COPS2 | Two-hybrid | 10207062 | 10090 | 9606 | BIOGRID |
| Sin3a | Hdac1 | Affinity Capture-Western | 10688671 | 10090 | 10090 | BIOGRID |
| Sin3a | Sufu | Phenotypic Enhancement | 11960000 | 10090 | 10090 | BIOGRID |
| Sin3a | Smad4 | Affinity Capture-Western | 17226765 | 10090 | 10090 | BIOGRID |
| Sin3a | Trp53 | Two-hybrid | 20211142 | 10090 | 10090 | BIOGRID |
| Sin3a | Nanog | Affinity Capture-Western | 18454139 | 10090 | 10090 | BIOGRID |
| Sin3a | SNAI1 | Affinity Capture-Western | 14673164 | 10090 | 9606 | BIOGRID |
| Sin3a | SNAI2 | Affinity Capture-Western | 14673164 | 10090 | 9606 | BIOGRID |
| Sin3a | SNAI3 | Affinity Capture-Western | 14673164 | 10090 | 9606 | BIOGRID |
| Sin3a | Hdac2 | Affinity Capture-Western | 16109738 | 10090 | 10090 | BIOGRID |
| Sin3a | Sp3 | Affinity Capture-Western | 16109738 | 10090 | 10090 | BIOGRID |
| Sin3a | Mnt | Affinity Capture-Western | 16103876 | 10090 | 10090 | BIOGRID |
| Sin3a | Sin3b | Affinity Capture-Western | 16103876 | 10090 | 10090 | BIOGRID |
| Sin3a | Hdac1 | Affinity Capture-Western | 16103876 | 10090 | 10090 | BIOGRID |
| Sin3a | Suds3 | Affinity Capture-Western | 15489224 | 10090 | 10090 | BIOGRID |
| Sin3a | TP53 | Affinity Capture-Western | 11313951 | 10090 | 9606 | BIOGRID |
| Sin3a | TBP | Affinity Capture-Western | 11313951 | 10090 | 9606 | BIOGRID |
| Sin3a | KLF1 | Affinity Capture-Western | 11287616 | 10090 | 9606 | BIOGRID |
| Sin3a | KLF1 | Reconstituted Complex | 11287616 | 10090 | 9606 | BIOGRID |
| Sin3a | SFPQ | Affinity Capture-Western | 11259580 | 10090 | 9606 | BIOGRID |
| Sin3a | SFPQ | Reconstituted Complex | 11259580 | 10090 | 9606 | BIOGRID |
| Sin3a | MXD1 | Far Western | 10551834 | 10090 | 9606 | BIOGRID |
| Sin3a | Hdac1 | Affinity Capture-Western | 10409740 | 10090 | 10090 | BIOGRID |
| Sin3a | Cebpb | Reconstituted Complex | 21521687 | 10090 | 10090 | BIOGRID |
| Sin3a | Hdac1 | Affinity Capture-Western | 21454521 | 10090 | 10090 | BIOGRID |
| Sin3a | Gon4l | Affinity Capture-Western | 21454521 | 10090 | 10090 | BIOGRID |
| Sin3a | Yy1 | Affinity Capture-Western | 21454521 | 10090 | 10090 | BIOGRID |
| Sin3a | Hdac1 | Affinity Capture-Western | 21448134 | 10090 | 10090 | BIOGRID |
| Sin3a | Kdm5b | Affinity Capture-Western | 21448134 | 10090 | 10090 | BIOGRID |
| Sin3a | Per2 | Affinity Capture-Western | 21680841 | 10090 | 10090 | BIOGRID |
| Sin3a | Sfpq | Affinity Capture-Western | 21680841 | 10090 | 10090 | BIOGRID |
| Sin3a | Etv6 | Affinity Capture-Western | 12527908 | 10090 | 10090 | BIOGRID |
| Sin3a | Tet1 | Affinity Capture-Western | 21490601 | 10090 | 10090 | BIOGRID |
| Sin3a | GOLGA1 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Sin3a | HDAC1 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Sin3a | ING1 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Sin3a | ARID4A | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Sin3a | RBBP7 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Sin3a | SAP30 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Sin3a | NCOR1 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Sin3a | SORBS3 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Sin3a | BRMS1 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Sin3a | FAM60A | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Sin3a | SUDS3 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Sin3a | SAP130 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Sin3a | BRMS1L | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Sin3a | Arnt2 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Sin3a | Cenpe | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Sin3a | Deaf1 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Sin3a | Efcab6 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Sin3a | Nr4a3 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Sin3a | Rbl1 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Sin3a | Rbl2 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Sin3a | Satb1 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Sin3a | Smarca5 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Sin3a | Smc2 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
| Sin3a | Tcf7l2 | Co-fractionation | 32325033 | 10090 | 10090 | BIOGRID |
Annotation of Sin3a
Expression of Sin3a
Disease information of Sin3a